RNA–Protein interactions for RNA: ENST00000461578.1

PABPC4-208, Transcript of poly(A) binding protein cytoplasmic 4, humanhuman

TSL 5

Gene PABPC4, Length 193 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC4-208ENST00000461578 SCAPERQ9BY12 1400 aa23.11■■□□□ 1.29
PABPC4-208ENST00000461578 CERKQ8TCT0 537 aa23.11■■□□□ 1.29
PABPC4-208ENST00000461578 PLCH2O75038 1416 aa23.07■■□□□ 1.28
PABPC4-208ENST00000461578 ATP1B4Q9UN42 357 aaPredicted RBP23.06■■□□□ 1.28
PABPC4-208ENST00000461578 ATP10AO60312 1499 aa23.04■■□□□ 1.28
PABPC4-208ENST00000461578 CEBPAP49715 358 aaPredicted RBP23.03■■□□□ 1.28
PABPC4-208ENST00000461578 EHMT2Q96KQ7 1210 aa23.03■■□□□ 1.28
PABPC4-208ENST00000461578 ARHGEF12Q9NZN5 1544 aa23.03■■□□□ 1.28
PABPC4-208ENST00000461578 C9orf84Q5VXU9 1444 aa23.02■■□□□ 1.28
PABPC4-208ENST00000461578 PREX1Q8TCU6 1659 aa23.01■■□□□ 1.27
PABPC4-208ENST00000461578 MYO5CQ9NQX4 1742 aa23.01■■□□□ 1.27
PABPC4-208ENST00000461578 EFCAB2Q5VUJ9 269 aa22.99■■□□□ 1.27
PABPC4-208ENST00000461578 KIF14Q15058 1648 aa22.96■■□□□ 1.27
PABPC4-208ENST00000461578 MYT1LQ9UL68 1186 aa22.95■■□□□ 1.26
PABPC4-208ENST00000461578 ARHGAP5Q13017 1502 aa22.92■■□□□ 1.26
PABPC4-208ENST00000461578 ZNF518AQ6AHZ1 1483 aa22.92■■□□□ 1.26
PABPC4-208ENST00000461578 STRCQ7RTU9 1775 aa22.92■■□□□ 1.26
PABPC4-208ENST00000461578 AFAP1Q8N556 730 aa22.92■■□□□ 1.26
PABPC4-208ENST00000461578 FMN1Q68DA7 1419 aa22.91■■□□□ 1.26
PABPC4-208ENST00000461578 UBTFP17480 764 aaKnown RBP22.91■■□□□ 1.26
PABPC4-208ENST00000461578 CDK11AQ9UQ88 783 aaPredicted RBP22.91■■□□□ 1.26
PABPC4-208ENST00000461578 UHRF1BP1Q6BDS2 1440 aa22.91■■□□□ 1.26
PABPC4-208ENST00000461578 DISP3Q9P2K9 1392 aa22.89■■□□□ 1.25
PABPC4-208ENST00000461578 DMRT2Q9Y5R5 561 aa22.88■■□□□ 1.25
PABPC4-208ENST00000461578 KDM5CP41229 1560 aa22.88■■□□□ 1.25
PABPC4-208ENST00000461578 ARHGAP35Q9NRY4 1499 aa22.87■■□□□ 1.25
PABPC4-208ENST00000461578 TROQ12816 1431 aaPredicted RBP22.87■■□□□ 1.25
PABPC4-208ENST00000461578 DIP2CQ9Y2E4 1556 aa22.87■■□□□ 1.25
PABPC4-208ENST00000461578 ILDR2Q71H61 639 aa22.85■■□□□ 1.25
PABPC4-208ENST00000461578 CLIP1P30622 1438 aa22.84■■□□□ 1.25
PABPC4-208ENST00000461578 ABCA6Q8N139 1617 aa22.83■■□□□ 1.25
PABPC4-208ENST00000461578 SETD1BQ9UPS6 1966 aaKnown RBP22.83■■□□□ 1.24
PABPC4-208ENST00000461578 LRRIQ1Q96JM4 1722 aa22.82■■□□□ 1.24
PABPC4-208ENST00000461578 C3P01024 1663 aa22.82■■□□□ 1.24
PABPC4-208ENST00000461578 CDC42BPBQ9Y5S2 1711 aa22.81■■□□□ 1.24
PABPC4-208ENST00000461578 ESF1Q9H501 851 aaKnown RBP22.8■■□□□ 1.24
PABPC4-208ENST00000461578 REREQ9P2R6 1566 aa22.79■■□□□ 1.24
PABPC4-208ENST00000461578 TRAPPC8Q9Y2L5 1435 aa22.77■■□□□ 1.24
PABPC4-208ENST00000461578 MLH3Q9UHC1 1453 aa22.77■■□□□ 1.24
PABPC4-208ENST00000461578 PTPRTO14522 1441 aa22.75■■□□□ 1.23
PABPC4-208ENST00000461578 ABCC1P33527 1531 aa22.75■■□□□ 1.23
PABPC4-208ENST00000461578 PREX2Q70Z35 1606 aa22.75■■□□□ 1.23
PABPC4-208ENST00000461578 ITSN2Q9NZM3 1697 aa22.74■■□□□ 1.23
PABPC4-208ENST00000461578 AGLP35573 1532 aa22.73■■□□□ 1.23
PABPC4-208ENST00000461578 SOCS7O14512 581 aa22.72■■□□□ 1.23
PABPC4-208ENST00000461578 SPATA31D1Q6ZQQ2 1576 aa22.72■■□□□ 1.23
PABPC4-208ENST00000461578 KIDINS220Q9ULH0 1771 aa22.7■■□□□ 1.22
PABPC4-208ENST00000461578 LTBP4Q8N2S1 1624 aa22.69■■□□□ 1.22
PABPC4-208ENST00000461578 NCOA1Q15788 1441 aa22.67■■□□□ 1.22
PABPC4-208ENST00000461578 CNTLNQ9NXG0 1405 aa22.65■■□□□ 1.22
PABPC4-208ENST00000461578 CDC42BPAQ5VT25 1732 aa22.65■■□□□ 1.22
PABPC4-208ENST00000461578 ZNF777Q9ULD5 760 aaPredicted RBP22.65■■□□□ 1.22
PABPC4-208ENST00000461578 CCDC18Q5T9S5 1454 aa22.65■■□□□ 1.22
PABPC4-208ENST00000461578 CAMSAP1Q5T5Y3 1602 aa22.64■■□□□ 1.21
PABPC4-208ENST00000461578 CASKIN1Q8WXD9 1431 aa22.63■■□□□ 1.21
PABPC4-208ENST00000461578 SAMD9LQ8IVG5 1584 aa22.62■■□□□ 1.21
PABPC4-208ENST00000461578 SUPT6HQ7KZ85 1726 aaKnown RBP22.6■■□□□ 1.21
PABPC4-208ENST00000461578 IQSEC2Q5JU85 1478 aa22.6■■□□□ 1.21
PABPC4-208ENST00000461578 NCKAP5LQ9HCH0 1330 aa22.59■■□□□ 1.21
PABPC4-208ENST00000461578 MROH2AA6NES4 1674 aa22.59■■□□□ 1.21
PABPC4-208ENST00000461578 SYCP2Q9BX26 1530 aa22.59■■□□□ 1.21
PABPC4-208ENST00000461578 ZMYM3Q14202 1370 aa22.59■■□□□ 1.21
PABPC4-208ENST00000461578 NPATQ14207 1427 aa22.58■■□□□ 1.21
PABPC4-208ENST00000461578 SPAG9O60271 1321 aaKnown RBP22.57■■□□□ 1.2
PABPC4-208ENST00000461578 HNRNPMP52272 730 aaKnown RBP eCLIP22.56■■□□□ 1.21e-6■□□□□ 10.4
PABPC4-208ENST00000461578 ZNF335Q9H4Z2 1342 aaPredicted RBP22.56■■□□□ 1.2
PABPC4-208ENST00000461578 CLTCQ00610 1675 aaKnown RBP22.55■■□□□ 1.2
PABPC4-208ENST00000461578 CHIC1Q5VXU3 224 aa22.54■■□□□ 1.2
PABPC4-208ENST00000461578 ATP7AQ04656 1500 aa22.52■■□□□ 1.2
PABPC4-208ENST00000461578 UBAP1LF5GYI3 381 aa22.52■■□□□ 1.2
PABPC4-208ENST00000461578 MYO3AQ8NEV4 1616 aa22.52■■□□□ 1.2
PABPC4-208ENST00000461578 GPATCH8Q9UKJ3 1502 aaKnown RBP22.52■■□□□ 1.19
PABPC4-208ENST00000461578 FYCO1Q9BQS8 1478 aa22.51■■□□□ 1.19
PABPC4-208ENST00000461578 ZNF142P52746 1687 aaPredicted RBP22.49■■□□□ 1.19
PABPC4-208ENST00000461578 GGT6Q6P531 493 aa22.49■■□□□ 1.19
PABPC4-208ENST00000461578 A2MP01023 1474 aa22.48■■□□□ 1.19
PABPC4-208ENST00000461578 INO80Q9ULG1 1556 aaPredicted RBP22.48■■□□□ 1.19
PABPC4-208ENST00000461578 CEP170BQ9Y4F5 1589 aaPredicted RBP22.48■■□□□ 1.19
PABPC4-208ENST00000461578 PLXNC1O60486 1568 aa22.47■■□□□ 1.19
PABPC4-208ENST00000461578 PTPRKQ15262 1439 aa22.47■■□□□ 1.19
PABPC4-208ENST00000461578 PKD2Q13563 968 aa22.46■■□□□ 1.19
PABPC4-208ENST00000461578 CFDP1Q9UEE9 299 aaPredicted RBP22.46■■□□□ 1.19
PABPC4-208ENST00000461578 PLA2R1Q13018 1463 aa22.46■■□□□ 1.19
PABPC4-208ENST00000461578 TCOF1Q13428 1488 aaKnown RBP22.43■■□□□ 1.18
PABPC4-208ENST00000461578 PLEKHH2Q8IVE3 1493 aa22.43■■□□□ 1.18
PABPC4-208ENST00000461578 KIAA1107Q9UPP5 1409 aa22.43■■□□□ 1.18
PABPC4-208ENST00000461578 CCNB3Q8WWL7 1395 aa22.43■■□□□ 1.18
PABPC4-208ENST00000461578 PPP6R1Q9UPN7 881 aa22.41■■□□□ 1.18
PABPC4-208ENST00000461578 ADGBQ8N7X0 1667 aa22.39■■□□□ 1.17
PABPC4-208ENST00000461578 SCAF1Q9H7N4 1312 aaKnown RBP22.38■■□□□ 1.17
PABPC4-208ENST00000461578 MTUS2Q5JR59 1369 aa22.37■■□□□ 1.17
PABPC4-208ENST00000461578 ZNF644Q9H582 1327 aaPredicted RBP22.36■■□□□ 1.17
PABPC4-208ENST00000461578 DNMT1P26358 1616 aaKnown RBP22.35■■□□□ 1.17
PABPC4-208ENST00000461578 A2ML1A8K2U0 1454 aa22.35■■□□□ 1.17
PABPC4-208ENST00000461578 PIP4K2BP78356 416 aa22.33■■□□□ 1.17
PABPC4-208ENST00000461578 TIAM1Q13009 1591 aa22.32■■□□□ 1.16
PABPC4-208ENST00000461578 HSPA1LP34931 641 aa22.3■■□□□ 1.16
PABPC4-208ENST00000461578 POLR1AO95602 1720 aaPredicted RBP22.3■■□□□ 1.16
PABPC4-208ENST00000461578 FBXO31Q5XUX0 539 aaPredicted RBP22.29■■□□□ 1.16
PABPC4-208ENST00000461578 MBD5Q9P267 1494 aa22.28■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms