RNA–Protein interactions for RNA: ENST00000460428.5

SFPQ-202, Transcript of splicing factor proline and glutamine rich, humanhuman

TSL 2

Gene SFPQ, Length 464 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFPQ-202ENST00000460428 CFDP1Q9UEE9 299 aaPredicted RBP11.9□□□□□ -0.5
SFPQ-202ENST00000460428 CAMSAP2Q08AD1 1489 aa11.89□□□□□ -0.51
SFPQ-202ENST00000460428 MAPKBP1O60336 1514 aa11.89□□□□□ -0.51
SFPQ-202ENST00000460428 ZCCHC11Q5TAX3 1644 aaKnown RBP11.89□□□□□ -0.51
SFPQ-202ENST00000460428 ADGRL2O95490 1459 aa11.89□□□□□ -0.51
SFPQ-202ENST00000460428 PREX2Q70Z35 1606 aa11.87□□□□□ -0.51
SFPQ-202ENST00000460428 SHANK2Q9UPX8 1470 aa11.87□□□□□ -0.51
SFPQ-202ENST00000460428 ARHGEF5Q12774 1597 aa11.87□□□□□ -0.51
SFPQ-202ENST00000460428 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.86□□□□□ -0.51
SFPQ-202ENST00000460428 RSPH4AQ5TD94 716 aa11.86□□□□□ -0.51
SFPQ-202ENST00000460428 TIMELESSQ9UNS1 1208 aa11.86□□□□□ -0.51
SFPQ-202ENST00000460428 CDC42BPBQ9Y5S2 1711 aa11.86□□□□□ -0.51
SFPQ-202ENST00000460428 ZNF644Q9H582 1327 aaPredicted RBP11.86□□□□□ -0.51
SFPQ-202ENST00000460428 ARAP3Q8WWN8 1544 aa11.85□□□□□ -0.51
SFPQ-202ENST00000460428 CROCC2H7BZ55 1655 aa11.84□□□□□ -0.51
SFPQ-202ENST00000460428 MBD5Q9P267 1494 aa11.84□□□□□ -0.51
SFPQ-202ENST00000460428 NCOA1Q15788 1441 aa11.84□□□□□ -0.51
SFPQ-202ENST00000460428 KIAA1107Q9UPP5 1409 aa11.84□□□□□ -0.51
SFPQ-202ENST00000460428 ADGBQ8N7X0 1667 aa11.84□□□□□ -0.51
SFPQ-202ENST00000460428 PLCH2O75038 1416 aa11.83□□□□□ -0.52
SFPQ-202ENST00000460428 TTC37Q6PGP7 1564 aa11.82□□□□□ -0.52
SFPQ-202ENST00000460428 SAMD9LQ8IVG5 1584 aa11.82□□□□□ -0.52
SFPQ-202ENST00000460428 PLEKHH2Q8IVE3 1493 aa11.82□□□□□ -0.52
SFPQ-202ENST00000460428 MYO5CQ9NQX4 1742 aa11.81□□□□□ -0.52
SFPQ-202ENST00000460428 MAST1Q9Y2H9 1570 aa11.8□□□□□ -0.52
SFPQ-202ENST00000460428 RRP7BPQ9NSQ0 103 aa11.8□□□□□ -0.52
SFPQ-202ENST00000460428 WDR7Q9Y4E6 1490 aa11.8□□□□□ -0.52
SFPQ-202ENST00000460428 CHIC2Q9UKJ5 165 aa11.79□□□□□ -0.52
SFPQ-202ENST00000460428 ANKRD30AQ9BXX3 1397 aa11.79□□□□□ -0.52
SFPQ-202ENST00000460428 KDM6BO15054 1643 aa11.78□□□□□ -0.52
SFPQ-202ENST00000460428 CCDC141Q6ZP82 1450 aa11.78□□□□□ -0.52
SFPQ-202ENST00000460428 DENND4BO75064 1496 aaPredicted RBP11.77□□□□□ -0.52
SFPQ-202ENST00000460428 ABCA9Q8IUA7 1624 aa11.77□□□□□ -0.53
SFPQ-202ENST00000460428 C9orf84Q5VXU9 1444 aa11.77□□□□□ -0.53
SFPQ-202ENST00000460428 ARHGAP5Q13017 1502 aa11.76□□□□□ -0.53
SFPQ-202ENST00000460428 EFCAB2Q5VUJ9 269 aa11.76□□□□□ -0.53
SFPQ-202ENST00000460428 ZNF777Q9ULD5 760 aaPredicted RBP11.76□□□□□ -0.53
SFPQ-202ENST00000460428 TSPY4P0CV99 314 aa11.75□□□□□ -0.53
SFPQ-202ENST00000460428 TSPY10P0CW01 314 aa11.75□□□□□ -0.53
SFPQ-202ENST00000460428 ASXL2Q76L83 1435 aa11.74□□□□□ -0.53
SFPQ-202ENST00000460428 ZNF316A6NFI3 1004 aaPredicted RBP11.73□□□□□ -0.53
SFPQ-202ENST00000460428 ABCC1P33527 1531 aa11.73□□□□□ -0.53
SFPQ-202ENST00000460428 HNRNPMP52272 730 aaKnown RBP eCLIP11.73□□□□□ -0.536e-7■■■□□ 16
SFPQ-202ENST00000460428 MPHOSPH9Q99550 1183 aa11.73□□□□□ -0.53
SFPQ-202ENST00000460428 KDM5DQ9BY66 1539 aa11.73□□□□□ -0.53
SFPQ-202ENST00000460428 ANKRD50Q9ULJ7 1429 aa11.73□□□□□ -0.53
SFPQ-202ENST00000460428 ARHGEF12Q9NZN5 1544 aa11.72□□□□□ -0.53
SFPQ-202ENST00000460428 KCNH8Q96L42 1107 aa11.72□□□□□ -0.53
SFPQ-202ENST00000460428 PLXNC1O60486 1568 aa11.71□□□□□ -0.53
SFPQ-202ENST00000460428 SYCP2Q9BX26 1530 aa11.71□□□□□ -0.53
SFPQ-202ENST00000460428 RTEL1-TNFRSF6BF6WH68 1400 aa11.71□□□□□ -0.53
SFPQ-202ENST00000460428 NPM1P06748 294 aaKnown RBP eCLIP11.71□□□□□ -0.53
SFPQ-202ENST00000460428 SIN3AQ96ST3 1273 aa11.71□□□□□ -0.53
SFPQ-202ENST00000460428 PZPP20742 1482 aa11.7□□□□□ -0.54
SFPQ-202ENST00000460428 ANKRD30BQ9BXX2 1392 aa11.69□□□□□ -0.54
SFPQ-202ENST00000460428 KIF15Q9NS87 1388 aa11.69□□□□□ -0.54
SFPQ-202ENST00000460428 PPP1R15AO75807 674 aaPredicted RBP11.69□□□□□ -0.54
SFPQ-202ENST00000460428 TRIM52Q96A61 297 aa11.68□□□□□ -0.54
SFPQ-202ENST00000460428 DUOX2Q9NRD8 1548 aa11.66□□□□□ -0.54
SFPQ-202ENST00000460428 FANCAO15360 1455 aa11.66□□□□□ -0.54
SFPQ-202ENST00000460428 TRAPPC8Q9Y2L5 1435 aa11.66□□□□□ -0.54
SFPQ-202ENST00000460428 RIMBP3CA6NJZ7 1639 aa11.65□□□□□ -0.54
SFPQ-202ENST00000460428 RIMBP3BA6NNM3 1639 aa11.65□□□□□ -0.54
SFPQ-202ENST00000460428 RIMBP3Q9UFD9 1639 aa11.65□□□□□ -0.54
SFPQ-202ENST00000460428 ERBINQ96RT1 1412 aa11.65□□□□□ -0.54
SFPQ-202ENST00000460428 UNC13BO14795 1591 aa11.65□□□□□ -0.54
SFPQ-202ENST00000460428 RPRD2Q5VT52 1461 aaKnown RBP11.64□□□□□ -0.55
SFPQ-202ENST00000460428 SLC4A1APQ9BWU0 796 aaKnown RBP11.64□□□□□ -0.55
SFPQ-202ENST00000460428 MAGI2Q86UL8 1455 aa11.63□□□□□ -0.55
SFPQ-202ENST00000460428 GLI2P10070 1586 aa11.63□□□□□ -0.55
SFPQ-202ENST00000460428 CFAP74Q9C0B2 1584 aa11.63□□□□□ -0.55
SFPQ-202ENST00000460428 NEUROD1Q13562 356 aa11.63□□□□□ -0.55
SFPQ-202ENST00000460428 TONSLQ96HA7 1378 aa11.63□□□□□ -0.55
SFPQ-202ENST00000460428 CD109Q6YHK3 1445 aa11.61□□□□□ -0.55
SFPQ-202ENST00000460428 ZFYVE16Q7Z3T8 1539 aa11.61□□□□□ -0.55
SFPQ-202ENST00000460428 NUP155O75694 1391 aa11.61□□□□□ -0.55
SFPQ-202ENST00000460428 ADGRL1O94910 1474 aa11.61□□□□□ -0.55
SFPQ-202ENST00000460428 NEO1Q92859 1461 aa11.61□□□□□ -0.55
SFPQ-202ENST00000460428 INO80Q9ULG1 1556 aaPredicted RBP11.61□□□□□ -0.55
SFPQ-202ENST00000460428 IQGAP3Q86VI3 1631 aa11.6□□□□□ -0.55
SFPQ-202ENST00000460428 SCAPERQ9BY12 1400 aa11.6□□□□□ -0.55
SFPQ-202ENST00000460428 SPAG9O60271 1321 aaKnown RBP11.6□□□□□ -0.55
SFPQ-202ENST00000460428 DIEXFQ68CQ4 756 aaKnown RBP11.59□□□□□ -0.55
SFPQ-202ENST00000460428 MAP3K4Q9Y6R4 1608 aa11.58□□□□□ -0.56
SFPQ-202ENST00000460428 PKD2Q13563 968 aa11.58□□□□□ -0.56
SFPQ-202ENST00000460428 ATP7AQ04656 1500 aa11.58□□□□□ -0.56
SFPQ-202ENST00000460428 FAM135AQ9P2D6 1515 aa11.58□□□□□ -0.56
SFPQ-202ENST00000460428 KDM5CP41229 1560 aa11.58□□□□□ -0.56
SFPQ-202ENST00000460428 ATP10AO60312 1499 aa11.57□□□□□ -0.56
SFPQ-202ENST00000460428 ZNF518AQ6AHZ1 1483 aa11.57□□□□□ -0.56
SFPQ-202ENST00000460428 TEX14Q8IWB6 1497 aa11.57□□□□□ -0.56
SFPQ-202ENST00000460428 CYB5RLQ6IPT4 315 aa11.57□□□□□ -0.56
SFPQ-202ENST00000460428 AFAP1Q8N556 730 aa11.57□□□□□ -0.56
SFPQ-202ENST00000460428 MLH3Q9UHC1 1453 aa11.57□□□□□ -0.56
SFPQ-202ENST00000460428 DEPDC5O75140 1603 aa11.57□□□□□ -0.56
SFPQ-202ENST00000460428 EIF2AK4Q9P2K8 1649 aaKnown RBP11.57□□□□□ -0.56
SFPQ-202ENST00000460428 POGZQ7Z3K3 1410 aa11.55□□□□□ -0.56
SFPQ-202ENST00000460428 FOXD1Q16676 465 aa11.55□□□□□ -0.56
SFPQ-202ENST00000460428 DHX29Q7Z478 1369 aaKnown RBP11.54□□□□□ -0.56
SFPQ-202ENST00000460428 VWDEQ8N2E2 1590 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms