RNA–Protein interactions for RNA: ENST00000456133.5

EPCAM-204, Transcript of epithelial cell adhesion molecule, humanhuman

TSL 5

Gene EPCAM, Length 1,501 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPCAM-204ENST00000456133 CERKQ8TCT0 537 aa22.46■■□□□ 1.19
EPCAM-204ENST00000456133 SCAPERQ9BY12 1400 aa22.46■■□□□ 1.19
EPCAM-204ENST00000456133 PLCH2O75038 1416 aa22.43■■□□□ 1.18
EPCAM-204ENST00000456133 MYO5CQ9NQX4 1742 aa22.43■■□□□ 1.18
EPCAM-204ENST00000456133 PREX1Q8TCU6 1659 aa22.42■■□□□ 1.18
EPCAM-204ENST00000456133 ARHGEF12Q9NZN5 1544 aa22.41■■□□□ 1.18
EPCAM-204ENST00000456133 ATP10AO60312 1499 aa22.4■■□□□ 1.18
EPCAM-204ENST00000456133 C9orf84Q5VXU9 1444 aa22.37■■□□□ 1.17
EPCAM-204ENST00000456133 CEBPAP49715 358 aaPredicted RBP22.35■■□□□ 1.17
EPCAM-204ENST00000456133 EFCAB2Q5VUJ9 269 aa22.35■■□□□ 1.17
EPCAM-204ENST00000456133 ATP1B4Q9UN42 357 aaPredicted RBP22.35■■□□□ 1.17
EPCAM-204ENST00000456133 STRCQ7RTU9 1775 aa22.35■■□□□ 1.17
EPCAM-204ENST00000456133 KIF14Q15058 1648 aa22.34■■□□□ 1.17
EPCAM-204ENST00000456133 SETD1BQ9UPS6 1966 aaKnown RBP22.33■■□□□ 1.17
EPCAM-204ENST00000456133 ZNF518AQ6AHZ1 1483 aa22.28■■□□□ 1.16
EPCAM-204ENST00000456133 FMN1Q68DA7 1419 aa22.28■■□□□ 1.16
EPCAM-204ENST00000456133 KDM5CP41229 1560 aa22.27■■□□□ 1.16
EPCAM-204ENST00000456133 ARHGAP5Q13017 1502 aa22.27■■□□□ 1.16
EPCAM-204ENST00000456133 LRRIQ1Q96JM4 1722 aa22.27■■□□□ 1.15
EPCAM-204ENST00000456133 EHMT2Q96KQ7 1210 aa22.26■■□□□ 1.15
EPCAM-204ENST00000456133 AFAP1Q8N556 730 aa22.26■■□□□ 1.15
EPCAM-204ENST00000456133 CDK11AQ9UQ88 783 aaPredicted RBP22.26■■□□□ 1.15
EPCAM-204ENST00000456133 DIP2CQ9Y2E4 1556 aa22.25■■□□□ 1.15
EPCAM-204ENST00000456133 UHRF1BP1Q6BDS2 1440 aa22.25■■□□□ 1.15
EPCAM-204ENST00000456133 ARHGAP35Q9NRY4 1499 aa22.24■■□□□ 1.15
EPCAM-204ENST00000456133 C3P01024 1663 aa22.24■■□□□ 1.15
EPCAM-204ENST00000456133 CDC42BPBQ9Y5S2 1711 aa22.24■■□□□ 1.15
EPCAM-204ENST00000456133 MYT1LQ9UL68 1186 aa22.24■■□□□ 1.15
EPCAM-204ENST00000456133 DMRT2Q9Y5R5 561 aa22.24■■□□□ 1.15
EPCAM-204ENST00000456133 TROQ12816 1431 aaPredicted RBP22.23■■□□□ 1.15
EPCAM-204ENST00000456133 UBTFP17480 764 aaKnown RBP22.23■■□□□ 1.15
EPCAM-204ENST00000456133 ABCA6Q8N139 1617 aa22.22■■□□□ 1.15
EPCAM-204ENST00000456133 REREQ9P2R6 1566 aa22.21■■□□□ 1.15
EPCAM-204ENST00000456133 DISP3Q9P2K9 1392 aa22.2■■□□□ 1.14
EPCAM-204ENST00000456133 CLIP1P30622 1438 aa22.19■■□□□ 1.14
EPCAM-204ENST00000456133 ILDR2Q71H61 639 aa22.18■■□□□ 1.14
EPCAM-204ENST00000456133 MLH3Q9UHC1 1453 aa22.16■■□□□ 1.14
EPCAM-204ENST00000456133 ITSN2Q9NZM3 1697 aa22.15■■□□□ 1.14
EPCAM-204ENST00000456133 PREX2Q70Z35 1606 aa22.15■■□□□ 1.14
EPCAM-204ENST00000456133 PTPRTO14522 1441 aa22.14■■□□□ 1.14
EPCAM-204ENST00000456133 ABCC1P33527 1531 aa22.13■■□□□ 1.13
EPCAM-204ENST00000456133 AGLP35573 1532 aa22.13■■□□□ 1.13
EPCAM-204ENST00000456133 TRAPPC8Q9Y2L5 1435 aa22.13■■□□□ 1.13
EPCAM-204ENST00000456133 KIDINS220Q9ULH0 1771 aa22.12■■□□□ 1.13
EPCAM-204ENST00000456133 ESF1Q9H501 851 aaKnown RBP22.11■■□□□ 1.13
EPCAM-204ENST00000456133 CDC42BPAQ5VT25 1732 aa22.1■■□□□ 1.13
EPCAM-204ENST00000456133 LTBP4Q8N2S1 1624 aa22.09■■□□□ 1.13
EPCAM-204ENST00000456133 SOCS7O14512 581 aa22.08■■□□□ 1.13
EPCAM-204ENST00000456133 SPATA31D1Q6ZQQ2 1576 aa22.08■■□□□ 1.12
EPCAM-204ENST00000456133 NCOA1Q15788 1441 aa22.05■■□□□ 1.12
EPCAM-204ENST00000456133 CNTLNQ9NXG0 1405 aa22.04■■□□□ 1.12
EPCAM-204ENST00000456133 MROH2AA6NES4 1674 aa22.03■■□□□ 1.12
EPCAM-204ENST00000456133 CCDC18Q5T9S5 1454 aa22.03■■□□□ 1.12
EPCAM-204ENST00000456133 SUPT6HQ7KZ85 1726 aaKnown RBP22.01■■□□□ 1.11
EPCAM-204ENST00000456133 CAMSAP1Q5T5Y3 1602 aa22.01■■□□□ 1.11
EPCAM-204ENST00000456133 CASKIN1Q8WXD9 1431 aa22.01■■□□□ 1.11
EPCAM-204ENST00000456133 IQSEC2Q5JU85 1478 aa22.01■■□□□ 1.11
EPCAM-204ENST00000456133 SAMD9LQ8IVG5 1584 aa22■■□□□ 1.11
EPCAM-204ENST00000456133 ZNF777Q9ULD5 760 aaPredicted RBP21.96■■□□□ 1.11
EPCAM-204ENST00000456133 NPATQ14207 1427 aa21.96■■□□□ 1.11
EPCAM-204ENST00000456133 CLTCQ00610 1675 aaKnown RBP21.96■■□□□ 1.11
EPCAM-204ENST00000456133 SYCP2Q9BX26 1530 aa21.95■■□□□ 1.1
EPCAM-204ENST00000456133 ZMYM3Q14202 1370 aa21.95■■□□□ 1.1
EPCAM-204ENST00000456133 NCKAP5LQ9HCH0 1330 aa21.93■■□□□ 1.1
EPCAM-204ENST00000456133 SPAG9O60271 1321 aaKnown RBP21.92■■□□□ 1.1
EPCAM-204ENST00000456133 ZNF142P52746 1687 aaPredicted RBP21.92■■□□□ 1.1
EPCAM-204ENST00000456133 HNRNPMP52272 730 aaKnown RBP eCLIP21.91■■□□□ 1.1
EPCAM-204ENST00000456133 MYO3AQ8NEV4 1616 aa21.91■■□□□ 1.1
EPCAM-204ENST00000456133 ATP7AQ04656 1500 aa21.9■■□□□ 1.1
EPCAM-204ENST00000456133 GPATCH8Q9UKJ3 1502 aaKnown RBP21.9■■□□□ 1.1
EPCAM-204ENST00000456133 CHIC1Q5VXU3 224 aa21.9■■□□□ 1.1
EPCAM-204ENST00000456133 ZNF335Q9H4Z2 1342 aaPredicted RBP21.89■■□□□ 1.09
EPCAM-204ENST00000456133 FYCO1Q9BQS8 1478 aa21.89■■□□□ 1.09
EPCAM-204ENST00000456133 INO80Q9ULG1 1556 aaPredicted RBP21.88■■□□□ 1.09
EPCAM-204ENST00000456133 PLXNC1O60486 1568 aa21.87■■□□□ 1.09
EPCAM-204ENST00000456133 CEP170BQ9Y4F5 1589 aaPredicted RBP21.86■■□□□ 1.09
EPCAM-204ENST00000456133 UBAP1LF5GYI3 381 aa21.85■■□□□ 1.09
EPCAM-204ENST00000456133 A2MP01023 1474 aa21.85■■□□□ 1.09
EPCAM-204ENST00000456133 PLA2R1Q13018 1463 aa21.85■■□□□ 1.09
EPCAM-204ENST00000456133 PTPRKQ15262 1439 aa21.84■■□□□ 1.09
EPCAM-204ENST00000456133 PKD2Q13563 968 aa21.83■■□□□ 1.09
EPCAM-204ENST00000456133 KIAA1107Q9UPP5 1409 aa21.83■■□□□ 1.08
EPCAM-204ENST00000456133 ADGBQ8N7X0 1667 aa21.82■■□□□ 1.08
EPCAM-204ENST00000456133 GGT6Q6P531 493 aa21.82■■□□□ 1.08
EPCAM-204ENST00000456133 TCOF1Q13428 1488 aaKnown RBP21.82■■□□□ 1.08
EPCAM-204ENST00000456133 PLEKHH2Q8IVE3 1493 aa21.82■■□□□ 1.08
EPCAM-204ENST00000456133 CFDP1Q9UEE9 299 aaPredicted RBP21.81■■□□□ 1.08
EPCAM-204ENST00000456133 CCNB3Q8WWL7 1395 aa21.78■■□□□ 1.08
EPCAM-204ENST00000456133 DNMT1P26358 1616 aaKnown RBP21.76■■□□□ 1.07
EPCAM-204ENST00000456133 PPP6R1Q9UPN7 881 aa21.75■■□□□ 1.07
EPCAM-204ENST00000456133 POLR1AO95602 1720 aaPredicted RBP21.75■■□□□ 1.07
EPCAM-204ENST00000456133 A2ML1A8K2U0 1454 aa21.74■■□□□ 1.07
EPCAM-204ENST00000456133 MTUS2Q5JR59 1369 aa21.72■■□□□ 1.07
EPCAM-204ENST00000456133 ZNF644Q9H582 1327 aaPredicted RBP21.71■■□□□ 1.07
EPCAM-204ENST00000456133 TIAM1Q13009 1591 aa21.71■■□□□ 1.07
EPCAM-204ENST00000456133 NEURL4Q96JN8 1562 aa21.68■■□□□ 1.06
EPCAM-204ENST00000456133 MBD5Q9P267 1494 aa21.67■■□□□ 1.06
EPCAM-204ENST00000456133 SCAF1Q9H7N4 1312 aaKnown RBP21.67■■□□□ 1.06
EPCAM-204ENST00000456133 HSPA1LP34931 641 aa21.65■■□□□ 1.06
EPCAM-204ENST00000456133 RTEL1-TNFRSF6BF6WH68 1400 aa21.65■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms