RNA–Protein interactions for RNA: ENST00000453091.6

RIF1-206, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RIF1, Length 8,053 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-206ENST00000453091 RCAN3Q9UKA8 241 aa10.02□□□□□ -0.81
RIF1-206ENST00000453091 GOLGA6L22H0YM25 854 aa10.01□□□□□ -0.81
RIF1-206ENST00000453091 EXOC6Q8TAG9 804 aa10.01□□□□□ -0.81
RIF1-206ENST00000453091 L3MBTL2Q969R5 705 aa10.01□□□□□ -0.81
RIF1-206ENST00000453091 CFAP53Q96M91 514 aa10□□□□□ -0.81
RIF1-206ENST00000453091 ERCC6Q03468 1493 aa10□□□□□ -0.81
RIF1-206ENST00000453091 IPO9Q96P70 1041 aaKnown RBP10□□□□□ -0.81
RIF1-206ENST00000453091 CLUAP1Q96AJ1 413 aa9.99□□□□□ -0.81
RIF1-206ENST00000453091 MAPK8IP3Q9UPT6 1336 aa9.99□□□□□ -0.81
RIF1-206ENST00000453091 MPHOSPH9Q99550 1183 aa9.99□□□□□ -0.81
RIF1-206ENST00000453091 FHOD3Q2V2M9 1422 aa9.99□□□□□ -0.81
RIF1-206ENST00000453091 NUTM2FA1L443 756 aa9.98□□□□□ -0.81
RIF1-206ENST00000453091 NUDCQ9Y266 331 aa9.98□□□□□ -0.81
RIF1-206ENST00000453091 TRHP20396 242 aaPredicted RBP9.97□□□□□ -0.81
RIF1-206ENST00000453091 MFAP1P55081 439 aaKnown RBP9.97□□□□□ -0.81
RIF1-206ENST00000453091 SRPK2P78362 688 aaKnown RBP9.97□□□□□ -0.81
RIF1-206ENST00000453091 HAP1P54257 671 aaPredicted RBP9.97□□□□□ -0.81
RIF1-206ENST00000453091 TMF1P82094 1093 aa9.96□□□□□ -0.82
RIF1-206ENST00000453091 HSCBQ8IWL3 235 aa9.95□□□□□ -0.82
RIF1-206ENST00000453091 TULP1O00294 542 aaPredicted RBP9.95□□□□□ -0.82
RIF1-206ENST00000453091 RRP7AQ9Y3A4 280 aaKnown RBP9.95□□□□□ -0.82
RIF1-206ENST00000453091 NOL8Q76FK4 1167 aaKnown RBP9.94□□□□□ -0.82
RIF1-206ENST00000453091 MORC1Q86VD1 984 aa9.94□□□□□ -0.82
RIF1-206ENST00000453091 FOXD4L5Q5VV16 416 aaPredicted RBP9.94□□□□□ -0.82
RIF1-206ENST00000453091 FOXD4L4Q8WXT5 416 aaPredicted RBP9.94□□□□□ -0.82
RIF1-206ENST00000453091 BCL2L13Q9BXK5 485 aa9.93□□□□□ -0.82
RIF1-206ENST00000453091 ITPRIPQ8IWB1 547 aa9.92□□□□□ -0.82
RIF1-206ENST00000453091 RAPGEF2Q9Y4G8 1499 aa9.92□□□□□ -0.82
RIF1-206ENST00000453091 KTN1Q86UP2 1357 aaKnown RBP9.92□□□□□ -0.82
RIF1-206ENST00000453091 PDE4AP27815 886 aa9.92□□□□□ -0.82
RIF1-206ENST00000453091 NAP1L2Q9ULW6 460 aaPredicted RBP9.92□□□□□ -0.82
RIF1-206ENST00000453091 ARHGAP35Q9NRY4 1499 aa9.92□□□□□ -0.82
RIF1-206ENST00000453091 TCERG1O14776 1098 aaKnown RBP9.92□□□□□ -0.82
RIF1-206ENST00000453091 CRBNQ96SW2 442 aa9.92□□□□□ -0.82
RIF1-206ENST00000453091 BAZ1AQ9NRL2 1556 aaPredicted RBP9.91□□□□□ -0.82
RIF1-206ENST00000453091 NUP155O75694 1391 aa9.9□□□□□ -0.82
RIF1-206ENST00000453091 CDCA8Q53HL2 280 aa9.9□□□□□ -0.82
RIF1-206ENST00000453091 TIMELESSQ9UNS1 1208 aa9.9□□□□□ -0.82
RIF1-206ENST00000453091 CASC1Q6TDU7 716 aa9.9□□□□□ -0.82
RIF1-206ENST00000453091 ROCK2O75116 1388 aaKnown RBP9.89□□□□□ -0.83
RIF1-206ENST00000453091 NACADO15069 1562 aa9.89□□□□□ -0.83
RIF1-206ENST00000453091 KIF3BO15066 747 aa9.89□□□□□ -0.83
RIF1-206ENST00000453091 OS9Q13438 667 aaPredicted RBP9.88□□□□□ -0.83
RIF1-206ENST00000453091 WIZO95785 1651 aa9.88□□□□□ -0.83
RIF1-206ENST00000453091 U2AF1L5P0DN76 240 aaPredicted RBP9.88□□□□□ -0.83
RIF1-206ENST00000453091 U2AF1Q01081 240 aaKnown RBP eCLIP9.88□□□□□ -0.832e-6■■■■□ 20.3
RIF1-206ENST00000453091 L1TD1Q5T7N2 865 aaKnown RBP9.88□□□□□ -0.83
RIF1-206ENST00000453091 PAK3O75914 559 aaPredicted RBP9.88□□□□□ -0.83
RIF1-206ENST00000453091 PRKRIP1Q9H875 184 aaPredicted RBP9.88□□□□□ -0.83
RIF1-206ENST00000453091 MSNP26038 577 aaKnown RBP9.87□□□□□ -0.83
RIF1-206ENST00000453091 TRAK1Q9UPV9 953 aa9.87□□□□□ -0.83
RIF1-206ENST00000453091 ZNF644Q9H582 1327 aaPredicted RBP9.87□□□□□ -0.83
RIF1-206ENST00000453091 ST20-MTHFSA0A0A6YYL1 179 aa9.86□□□□□ -0.83
RIF1-206ENST00000453091 GOLGA6L3A6NEY3 463 aa9.86□□□□□ -0.83
RIF1-206ENST00000453091 FOXD4L6Q3SYB3 417 aaPredicted RBP9.85□□□□□ -0.83
RIF1-206ENST00000453091 FOXD4L3Q6VB84 417 aaPredicted RBP9.85□□□□□ -0.83
RIF1-206ENST00000453091 ZNF330Q9Y3S2 320 aaPredicted RBP9.85□□□□□ -0.83
RIF1-206ENST00000453091 ELL2O00472 640 aaPredicted RBP9.85□□□□□ -0.83
RIF1-206ENST00000453091 SUGP2Q8IX01 1082 aaKnown RBP eCLIP9.85□□□□□ -0.83
RIF1-206ENST00000453091 PNNQ9H307 717 aaKnown RBP9.85□□□□□ -0.83
RIF1-206ENST00000453091 RRP1P56182 461 aaKnown RBP9.85□□□□□ -0.83
RIF1-206ENST00000453091 IL27Q8NEV9 243 aa9.85□□□□□ -0.83
RIF1-206ENST00000453091 ANO8Q9HCE9 1232 aaPredicted RBP9.85□□□□□ -0.83
RIF1-206ENST00000453091 FHAD1B1AJZ9 1412 aa9.84□□□□□ -0.83
RIF1-206ENST00000453091 KCNJ4P48050 445 aa9.84□□□□□ -0.83
RIF1-206ENST00000453091 LTV1Q96GA3 475 aaPredicted RBP9.84□□□□□ -0.83
RIF1-206ENST00000453091 PANK3Q9H999 370 aa9.84□□□□□ -0.83
RIF1-206ENST00000453091 GOLGA2Q08379 1002 aa9.84□□□□□ -0.83
RIF1-206ENST00000453091 COG6Q9Y2V7 657 aa9.84□□□□□ -0.83
RIF1-206ENST00000453091 RALBP1Q15311 655 aa9.83□□□□□ -0.84
RIF1-206ENST00000453091 CCDC184Q52MB2 194 aa9.83□□□□□ -0.84
RIF1-206ENST00000453091 ZRSR1Q15695 479 aaKnown RBP9.82□□□□□ -0.84
RIF1-206ENST00000453091 SMC4Q9NTJ3 1288 aa9.82□□□□□ -0.84
RIF1-206ENST00000453091 SKAP1Q86WV1 359 aa9.82□□□□□ -0.84
RIF1-206ENST00000453091 DRC7Q8IY82 874 aa9.82□□□□□ -0.84
RIF1-206ENST00000453091 FGD1P98174 961 aa9.81□□□□□ -0.84
RIF1-206ENST00000453091 RWDD1Q9H446 243 aaPredicted RBP9.81□□□□□ -0.84
RIF1-206ENST00000453091 GSE1Q14687 1217 aa9.81□□□□□ -0.84
RIF1-206ENST00000453091 FANCIQ9NVI1 1328 aa9.81□□□□□ -0.84
RIF1-206ENST00000453091 BRPF3Q9ULD4 1205 aa9.81□□□□□ -0.84
RIF1-206ENST00000453091 FMN1Q68DA7 1419 aa9.8□□□□□ -0.84
RIF1-206ENST00000453091 CDCA7LQ96GN5 454 aa9.8□□□□□ -0.84
RIF1-206ENST00000453091 VSIG10Q8N0Z9 540 aa9.8□□□□□ -0.84
RIF1-206ENST00000453091 CCDC9Q9Y3X0 531 aaKnown RBP9.79□□□□□ -0.84
RIF1-206ENST00000453091 CENPJQ9HC77 1338 aaPredicted RBP9.79□□□□□ -0.84
RIF1-206ENST00000453091 JPH4Q96JJ6 628 aa9.79□□□□□ -0.84
RIF1-206ENST00000453091 BCL11BQ9C0K0 894 aaPredicted RBP9.78□□□□□ -0.84
RIF1-206ENST00000453091 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.78□□□□□ -0.84
RIF1-206ENST00000453091 NLRP13Q86W25 1043 aa9.78□□□□□ -0.84
RIF1-206ENST00000453091 APAF1O14727 1248 aa9.78□□□□□ -0.84
RIF1-206ENST00000453091 SLC4A10Q6U841 1118 aa9.78□□□□□ -0.84
RIF1-206ENST00000453091 MYBBP1AQ9BQG0 1328 aaKnown RBP9.78□□□□□ -0.84
RIF1-206ENST00000453091 GOLGA6L4A6NEF3 574 aa9.78□□□□□ -0.84
RIF1-206ENST00000453091 MSH5O43196 834 aa9.78□□□□□ -0.84
RIF1-206ENST00000453091 RAD54L2Q9Y4B4 1467 aa9.77□□□□□ -0.85
RIF1-206ENST00000453091 GBP4Q96PP9 640 aa9.77□□□□□ -0.85
RIF1-206ENST00000453091 FAM161AQ3B820 660 aa9.77□□□□□ -0.85
RIF1-206ENST00000453091 MS4A1P11836 297 aa9.76□□□□□ -0.85
RIF1-206ENST00000453091 KANK1Q14678 1352 aa9.76□□□□□ -0.85
RIF1-206ENST00000453091 ZBED9Q6R2W3 1325 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms