RNA–Protein interactions for RNA: ENST00000452375.5

COPS7B-216, Transcript of COP9 signalosome subunit 7B, humanhuman

TSL 4

Gene COPS7B, Length 600 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7B-216ENST00000452375 PKD2Q13563 968 aa15.81■□□□□ 0.12
COPS7B-216ENST00000452375 SPNS2Q8IVW8 549 aa15.8■□□□□ 0.12
COPS7B-216ENST00000452375 HOXB1P14653 301 aaPredicted RBP15.77■□□□□ 0.12
COPS7B-216ENST00000452375 FBXO22Q8NEZ5 403 aa15.77■□□□□ 0.12
COPS7B-216ENST00000452375 MMRN1Q13201 1228 aa15.76■□□□□ 0.11
COPS7B-216ENST00000452375 MFRPQ9BY79 579 aa15.76■□□□□ 0.11
COPS7B-216ENST00000452375 RIMBP2O15034 1052 aa15.75■□□□□ 0.11
COPS7B-216ENST00000452375 ERBB3P21860 1342 aa15.74■□□□□ 0.11
COPS7B-216ENST00000452375 KRTAP3-3Q9BYR6 98 aa15.73■□□□□ 0.11
COPS7B-216ENST00000452375 KRTAP3-2Q9BYR7 98 aa15.73■□□□□ 0.11
COPS7B-216ENST00000452375 ABCC9O60706 1549 aa15.73■□□□□ 0.11
COPS7B-216ENST00000452375 VARS2Q5ST30 1063 aaKnown RBP15.66■□□□□ 0.1
COPS7B-216ENST00000452375 ARSIQ5FYB1 569 aa15.6■□□□□ 0.09
COPS7B-216ENST00000452375 GPR153Q6NV75 609 aa15.6■□□□□ 0.09
COPS7B-216ENST00000452375 KHSRPQ92945 711 aaKnown RBP eCLIP15.59■□□□□ 0.09
COPS7B-216ENST00000452375 ZSWIM6Q9HCJ5 1215 aa15.59■□□□□ 0.09
COPS7B-216ENST00000452375 C2orf72A6NCS6 295 aa15.57■□□□□ 0.08
COPS7B-216ENST00000452375 PPP1R37O75864 691 aa15.53■□□□□ 0.08
COPS7B-216ENST00000452375 KIF3CO14782 793 aa15.49■□□□□ 0.07
COPS7B-216ENST00000452375 TMC2Q8TDI7 906 aa15.48■□□□□ 0.07
COPS7B-216ENST00000452375 ZNF687Q8N1G0 1237 aa15.46■□□□□ 0.07
COPS7B-216ENST00000452375 NUDT7P0C024 238 aa15.43■□□□□ 0.06
COPS7B-216ENST00000452375 ZNF316A6NFI3 1004 aaPredicted RBP15.42■□□□□ 0.06
COPS7B-216ENST00000452375 CHGAP10645 457 aaKnown RBP15.42■□□□□ 0.06
COPS7B-216ENST00000452375 HS6ST3Q8IZP7 471 aa15.4■□□□□ 0.06
COPS7B-216ENST00000452375 PCDHGA4Q9Y5G9 962 aa15.37■□□□□ 0.05
COPS7B-216ENST00000452375 ANKRD13DQ6ZTN6 518 aa15.35■□□□□ 0.05
COPS7B-216ENST00000452375 RNF166Q96A37 237 aaPredicted RBP15.33■□□□□ 0.04
COPS7B-216ENST00000452375 LHX6Q9UPM6 363 aa15.33■□□□□ 0.04
COPS7B-216ENST00000452375 MYT1LQ9UL68 1186 aa15.31■□□□□ 0.04
COPS7B-216ENST00000452375 SLC34A2O95436 690 aa15.29■□□□□ 0.04
COPS7B-216ENST00000452375 AXIN2Q9Y2T1 843 aa15.26■□□□□ 0.03
COPS7B-216ENST00000452375 NKX1-1Q15270 411 aaPredicted RBP15.25■□□□□ 0.03
COPS7B-216ENST00000452375 LSM11P83369 360 aaKnown RBP eCLIP15.24■□□□□ 0.039e-7■■■□□ 16.4
COPS7B-216ENST00000452375 PLPP6Q8IY26 295 aa15.24■□□□□ 0.03
COPS7B-216ENST00000452375 DSG2Q14126 1118 aa15.21■□□□□ 0.03
COPS7B-216ENST00000452375 FOXK1P85037 733 aa15.2■□□□□ 0.02
COPS7B-216ENST00000452375 GPHNQ9NQX3 736 aaPredicted RBP15.2■□□□□ 0.02
COPS7B-216ENST00000452375 CCDC180Q9P1Z9 1646 aa15.19■□□□□ 0.02
COPS7B-216ENST00000452375 POTEEQ6S8J3 1075 aa15.19■□□□□ 0.02
COPS7B-216ENST00000452375 DCAF8L2P0C7V8 631 aa15.15■□□□□ 0.02
COPS7B-216ENST00000452375 PTCD2Q8WV60 388 aaKnown RBP15.15■□□□□ 0.02
COPS7B-216ENST00000452375 PBX2P40425 430 aa15.14■□□□□ 0.01
COPS7B-216ENST00000452375 PTGER2P43116 358 aa15.14■□□□□ 0.01
COPS7B-216ENST00000452375 UPF1Q92900 1129 aaKnown RBP eCLIP15.1■□□□□ 0.01
COPS7B-216ENST00000452375 KDM4FA0A1W2PPD8 638 aa15.08■□□□□ 0
COPS7B-216ENST00000452375 DNAJC5Q9H3Z4 198 aa15.08■□□□□ 0
COPS7B-216ENST00000452375 RYDENQ9NUL5 291 aaKnown RBP15.08■□□□□ 0
COPS7B-216ENST00000452375 TBC1D12O60347 775 aa15.07■□□□□ 0
COPS7B-216ENST00000452375 PSDA5PKW4 1024 aaPredicted RBP15.06■□□□□ 0
COPS7B-216ENST00000452375 ARHGAP33O14559 1287 aa15.06■□□□□ 0
COPS7B-216ENST00000452375 PSEN2P49810 448 aa15.05■□□□□ -0
COPS7B-216ENST00000452375 PPP4R3BQ5MIZ7 849 aa15.02■□□□□ -0
COPS7B-216ENST00000452375 DMRTA1Q5VZB9 504 aa15.02■□□□□ -0
COPS7B-216ENST00000452375 ADGRD1Q6QNK2 874 aa15.02■□□□□ -0
COPS7B-216ENST00000452375 PPP1R15BQ5SWA1 713 aa15.01□□□□□ -0.01
COPS7B-216ENST00000452375 CRISPLD2Q9H0B8 497 aa15.01□□□□□ -0.01
COPS7B-216ENST00000452375 GTPBP6O43824 516 aaPredicted RBP14.99□□□□□ -0.01
COPS7B-216ENST00000452375 NCKAP5LQ9HCH0 1330 aa14.98□□□□□ -0.01
COPS7B-216ENST00000452375 OXER1Q8TDS5 423 aa14.98□□□□□ -0.01
COPS7B-216ENST00000452375 KCNK17Q96T54 332 aa14.96□□□□□ -0.01
COPS7B-216ENST00000452375 PDE4AP27815 886 aa14.95□□□□□ -0.02
COPS7B-216ENST00000452375 ZNF454Q8N9F8 522 aa14.93□□□□□ -0.02
COPS7B-216ENST00000452375 LARP6Q9BRS8 491 aaKnown RBP14.93□□□□□ -0.02
COPS7B-216ENST00000452375 KCNH8Q96L42 1107 aa14.89□□□□□ -0.03
COPS7B-216ENST00000452375 TK2O00142 265 aa14.87□□□□□ -0.03
COPS7B-216ENST00000452375 DDX27Q96GQ7 796 aaKnown RBP14.87□□□□□ -0.03
COPS7B-216ENST00000452375 STAC3Q96MF2 364 aa14.86□□□□□ -0.03
COPS7B-216ENST00000452375 HRO43593 1189 aa14.85□□□□□ -0.03
COPS7B-216ENST00000452375 KCTD12Q96CX2 325 aaKnown RBP14.83□□□□□ -0.04
COPS7B-216ENST00000452375 HCSTQ9UBK5 93 aa14.83□□□□□ -0.04
COPS7B-216ENST00000452375 EVI5O60447 810 aa14.82□□□□□ -0.04
COPS7B-216ENST00000452375 CADPS2Q86UW7 1296 aa14.8□□□□□ -0.04
COPS7B-216ENST00000452375 FOSBP53539 338 aa14.79□□□□□ -0.04
COPS7B-216ENST00000452375 MAP3K9P80192 1104 aa14.79□□□□□ -0.04
COPS7B-216ENST00000452375 PLA2G2EQ9NZK7 142 aa14.78□□□□□ -0.04
COPS7B-216ENST00000452375 VPS9D1Q9Y2B5 631 aa14.78□□□□□ -0.04
COPS7B-216ENST00000452375 BCL2L12Q9HB09 334 aa14.77□□□□□ -0.05
COPS7B-216ENST00000452375 PTPREP23469 700 aa14.75□□□□□ -0.05
COPS7B-216ENST00000452375 MFSD10Q14728 455 aa14.75□□□□□ -0.05
COPS7B-216ENST00000452375 EMILIN3Q9NT22 766 aa14.75□□□□□ -0.05
COPS7B-216ENST00000452375 JPH4Q96JJ6 628 aa14.73□□□□□ -0.05
COPS7B-216ENST00000452375 ANO8Q9HCE9 1232 aaPredicted RBP14.73□□□□□ -0.05
COPS7B-216ENST00000452375 ADAM33Q9BZ11 813 aa14.72□□□□□ -0.05
COPS7B-216ENST00000452375 ZDHHC16Q969W1 377 aa14.71□□□□□ -0.05
COPS7B-216ENST00000452375 RB1CC1Q8TDY2 1594 aa14.7□□□□□ -0.06
COPS7B-216ENST00000452375 PTPN5P54829 565 aa14.7□□□□□ -0.06
COPS7B-216ENST00000452375 ZBED2Q9BTP6 218 aa14.66□□□□□ -0.06
COPS7B-216ENST00000452375 GOLGA8CPA6NN73 597 aa14.63□□□□□ -0.07
COPS7B-216ENST00000452375 SLC4A5Q9BY07 1137 aa14.63□□□□□ -0.07
COPS7B-216ENST00000452375 PCDHGA10Q9Y5H3 936 aa14.63□□□□□ -0.07
COPS7B-216ENST00000452375 MRPL50Q8N5N7 158 aaKnown RBP14.61□□□□□ -0.07
COPS7B-216ENST00000452375 BHMG1C9JSJ3 638 aaPredicted RBP14.6□□□□□ -0.07
COPS7B-216ENST00000452375 DPYSL4O14531 572 aa14.58□□□□□ -0.08
COPS7B-216ENST00000452375 WNT2BQ93097 391 aa14.58□□□□□ -0.08
COPS7B-216ENST00000452375 PROX2Q3B8N5 592 aa14.56□□□□□ -0.08
COPS7B-216ENST00000452375 THSD4Q6ZMP0 1018 aa14.56□□□□□ -0.08
COPS7B-216ENST00000452375 BBXQ8WY36 941 aaPredicted RBP14.56□□□□□ -0.08
COPS7B-216ENST00000452375 COL9A1P20849 921 aa14.55□□□□□ -0.08
COPS7B-216ENST00000452375 TYW1BQ6NUM6 668 aa14.55□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms