RNA–Protein interactions for RNA: ENST00000449339.1

AP000253.1-201, humanhuman

TSL 3 BASIC

Gene AP000253.1, Length 2,233 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP000253.1-201ENST00000449339 DNMT1P26358 1616 aaKnown RBP23.49■■□□□ 1.35
AP000253.1-201ENST00000449339 ABCC5O15440 1437 aa23.49■■□□□ 1.35
AP000253.1-201ENST00000449339 GCC2Q8IWJ2 1684 aa23.47■■□□□ 1.35
AP000253.1-201ENST00000449339 KDM6BO15054 1643 aa23.45■■□□□ 1.34
AP000253.1-201ENST00000449339 AKNAQ7Z591 1439 aa23.42■■□□□ 1.34
AP000253.1-201ENST00000449339 SIN3AQ96ST3 1273 aa23.42■■□□□ 1.34
AP000253.1-201ENST00000449339 ZCCHC11Q5TAX3 1644 aaKnown RBP23.39■■□□□ 1.34
AP000253.1-201ENST00000449339 UHRF1BP1LA0JNW5 1464 aa23.37■■□□□ 1.33
AP000253.1-201ENST00000449339 NEUROD1Q13562 356 aa23.37■■□□□ 1.33
AP000253.1-201ENST00000449339 OSCARQ8IYS5 282 aa23.37■■□□□ 1.33
AP000253.1-201ENST00000449339 ROCK1Q13464 1354 aa23.36■■□□□ 1.33
AP000253.1-201ENST00000449339 TTC37Q6PGP7 1564 aa23.35■■□□□ 1.33
AP000253.1-201ENST00000449339 CDC42BPBQ9Y5S2 1711 aa23.35■■□□□ 1.33
AP000253.1-201ENST00000449339 CROCC2H7BZ55 1655 aa23.34■■□□□ 1.33
AP000253.1-201ENST00000449339 KCNH8Q96L42 1107 aa23.34■■□□□ 1.33
AP000253.1-201ENST00000449339 KDM5BQ9UGL1 1544 aa23.34■■□□□ 1.33
AP000253.1-201ENST00000449339 TRIM52Q96A61 297 aa23.33■■□□□ 1.33
AP000253.1-201ENST00000449339 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP23.33■■□□□ 1.32
AP000253.1-201ENST00000449339 PREX2Q70Z35 1606 aa23.33■■□□□ 1.32
AP000253.1-201ENST00000449339 ADGBQ8N7X0 1667 aa23.31■■□□□ 1.32
AP000253.1-201ENST00000449339 HNRNPMP52272 730 aaKnown RBP eCLIP23.28■■□□□ 1.32
AP000253.1-201ENST00000449339 SAMD9LQ8IVG5 1584 aa23.28■■□□□ 1.32
AP000253.1-201ENST00000449339 NCOA1Q15788 1441 aa23.27■■□□□ 1.32
AP000253.1-201ENST00000449339 TIMELESSQ9UNS1 1208 aa23.27■■□□□ 1.31
AP000253.1-201ENST00000449339 DENND4BO75064 1496 aaPredicted RBP23.26■■□□□ 1.31
AP000253.1-201ENST00000449339 ADGRL2O95490 1459 aa23.25■■□□□ 1.31
AP000253.1-201ENST00000449339 ARHGAP5Q13017 1502 aa23.24■■□□□ 1.31
AP000253.1-201ENST00000449339 MYO5CQ9NQX4 1742 aa23.24■■□□□ 1.31
AP000253.1-201ENST00000449339 MBD5Q9P267 1494 aa23.23■■□□□ 1.31
AP000253.1-201ENST00000449339 C9orf84Q5VXU9 1444 aa23.22■■□□□ 1.31
AP000253.1-201ENST00000449339 ANKRD30AQ9BXX3 1397 aa23.21■■□□□ 1.31
AP000253.1-201ENST00000449339 MPHOSPH9Q99550 1183 aa23.21■■□□□ 1.31
AP000253.1-201ENST00000449339 ARHGEF5Q12774 1597 aa23.2■■□□□ 1.31
AP000253.1-201ENST00000449339 SHANK2Q9UPX8 1470 aa23.2■■□□□ 1.3
AP000253.1-201ENST00000449339 MIER1Q8N108 512 aa23.18■■□□□ 1.3
AP000253.1-201ENST00000449339 SYCP2Q9BX26 1530 aa23.18■■□□□ 1.3
AP000253.1-201ENST00000449339 TSPY4P0CV99 314 aa23.17■■□□□ 1.3
AP000253.1-201ENST00000449339 TSPY10P0CW01 314 aa23.17■■□□□ 1.3
AP000253.1-201ENST00000449339 FOXD1Q16676 465 aa23.17■■□□□ 1.3
AP000253.1-201ENST00000449339 CCDC141Q6ZP82 1450 aa23.16■■□□□ 1.3
AP000253.1-201ENST00000449339 PLCH2O75038 1416 aa23.14■■□□□ 1.29
AP000253.1-201ENST00000449339 WDR7Q9Y4E6 1490 aa23.13■■□□□ 1.29
AP000253.1-201ENST00000449339 TONSLQ96HA7 1378 aa23.12■■□□□ 1.29
AP000253.1-201ENST00000449339 ANKRD50Q9ULJ7 1429 aa23.12■■□□□ 1.29
AP000253.1-201ENST00000449339 PPP1R15AO75807 674 aaPredicted RBP23.12■■□□□ 1.29
AP000253.1-201ENST00000449339 SLC4A1APQ9BWU0 796 aaKnown RBP23.1■■□□□ 1.29
AP000253.1-201ENST00000449339 PZPP20742 1482 aa23.1■■□□□ 1.29
AP000253.1-201ENST00000449339 ARHGEF12Q9NZN5 1544 aa23.1■■□□□ 1.29
AP000253.1-201ENST00000449339 KIF15Q9NS87 1388 aa23.09■■□□□ 1.29
AP000253.1-201ENST00000449339 ACIN1Q9UKV3 1341 aaKnown RBP23.08■■□□□ 1.29
AP000253.1-201ENST00000449339 ASXL2Q76L83 1435 aa23.08■■□□□ 1.28
AP000253.1-201ENST00000449339 RSPH4AQ5TD94 716 aa23.07■■□□□ 1.28
AP000253.1-201ENST00000449339 EFCAB2Q5VUJ9 269 aa23.07■■□□□ 1.28
AP000253.1-201ENST00000449339 KIAA1107Q9UPP5 1409 aa23.06■■□□□ 1.28
AP000253.1-201ENST00000449339 PLEKHH2Q8IVE3 1493 aa23.06■■□□□ 1.28
AP000253.1-201ENST00000449339 CENPBP07199 599 aaPredicted RBP23.04■■□□□ 1.28
AP000253.1-201ENST00000449339 ANKRD30BQ9BXX2 1392 aa23.03■■□□□ 1.28
AP000253.1-201ENST00000449339 ABCC1P33527 1531 aa23.03■■□□□ 1.28
AP000253.1-201ENST00000449339 MAST1Q9Y2H9 1570 aa23.02■■□□□ 1.28
AP000253.1-201ENST00000449339 NPM1P06748 294 aaKnown RBP eCLIP23.01■■□□□ 1.27
AP000253.1-201ENST00000449339 ABCA9Q8IUA7 1624 aa23.01■■□□□ 1.27
AP000253.1-201ENST00000449339 TRAPPC8Q9Y2L5 1435 aa22.99■■□□□ 1.27
AP000253.1-201ENST00000449339 NUP155O75694 1391 aa22.99■■□□□ 1.27
AP000253.1-201ENST00000449339 ARAP3Q8WWN8 1544 aa22.98■■□□□ 1.27
AP000253.1-201ENST00000449339 PKD2Q13563 968 aa22.97■■□□□ 1.27
AP000253.1-201ENST00000449339 PLXNC1O60486 1568 aa22.94■■□□□ 1.26
AP000253.1-201ENST00000449339 FANCAO15360 1455 aa22.94■■□□□ 1.26
AP000253.1-201ENST00000449339 YTHDC1Q96MU7 727 aaKnown RBP22.94■■□□□ 1.26
AP000253.1-201ENST00000449339 RPRD2Q5VT52 1461 aaKnown RBP22.93■■□□□ 1.26
AP000253.1-201ENST00000449339 SCAF1Q9H7N4 1312 aaKnown RBP22.93■■□□□ 1.26
AP000253.1-201ENST00000449339 AFAP1Q8N556 730 aa22.93■■□□□ 1.26
AP000253.1-201ENST00000449339 KDM5DQ9BY66 1539 aa22.92■■□□□ 1.26
AP000253.1-201ENST00000449339 L3MBTL2Q969R5 705 aa22.92■■□□□ 1.26
AP000253.1-201ENST00000449339 HIRIP3Q9BW71 556 aaPredicted RBP22.91■■□□□ 1.26
AP000253.1-201ENST00000449339 CYB5RLQ6IPT4 315 aa22.87■■□□□ 1.25
AP000253.1-201ENST00000449339 DUOX2Q9NRD8 1548 aa22.87■■□□□ 1.25
AP000253.1-201ENST00000449339 SPAG9O60271 1321 aaKnown RBP22.87■■□□□ 1.25
AP000253.1-201ENST00000449339 TEX14Q8IWB6 1497 aa22.86■■□□□ 1.25
AP000253.1-201ENST00000449339 ADGRL1O94910 1474 aa22.85■■□□□ 1.25
AP000253.1-201ENST00000449339 RIMBP3CA6NJZ7 1639 aa22.85■■□□□ 1.25
AP000253.1-201ENST00000449339 RIMBP3BA6NNM3 1639 aa22.85■■□□□ 1.25
AP000253.1-201ENST00000449339 RIMBP3Q9UFD9 1639 aa22.85■■□□□ 1.25
AP000253.1-201ENST00000449339 FAM135AQ9P2D6 1515 aa22.85■■□□□ 1.25
AP000253.1-201ENST00000449339 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.85■■□□□ 1.25
AP000253.1-201ENST00000449339 UNC13BO14795 1591 aa22.85■■□□□ 1.25
AP000253.1-201ENST00000449339 SCAPERQ9BY12 1400 aa22.84■■□□□ 1.25
AP000253.1-201ENST00000449339 ZFYVE16Q7Z3T8 1539 aa22.84■■□□□ 1.25
AP000253.1-201ENST00000449339 CD109Q6YHK3 1445 aa22.81■■□□□ 1.24
AP000253.1-201ENST00000449339 DDX10Q13206 875 aaKnown RBP22.81■■□□□ 1.24
AP000253.1-201ENST00000449339 ERBINQ96RT1 1412 aa22.81■■□□□ 1.24
AP000253.1-201ENST00000449339 RTEL1-TNFRSF6BF6WH68 1400 aa22.8■■□□□ 1.24
AP000253.1-201ENST00000449339 PELP1Q8IZL8 1130 aaKnown RBP22.8■■□□□ 1.24
AP000253.1-201ENST00000449339 NBPF8Q3BBV2 869 aa22.78■■□□□ 1.24
AP000253.1-201ENST00000449339 INO80Q9ULG1 1556 aaPredicted RBP22.78■■□□□ 1.24
AP000253.1-201ENST00000449339 ATP7AQ04656 1500 aa22.78■■□□□ 1.24
AP000253.1-201ENST00000449339 MYT1LQ9UL68 1186 aa22.76■■□□□ 1.23
AP000253.1-201ENST00000449339 IQGAP3Q86VI3 1631 aa22.76■■□□□ 1.23
AP000253.1-201ENST00000449339 MAGI2Q86UL8 1455 aa22.74■■□□□ 1.23
AP000253.1-201ENST00000449339 CFAP74Q9C0B2 1584 aa22.7■■□□□ 1.22
AP000253.1-201ENST00000449339 KIDINS220Q9ULH0 1771 aa22.69■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms