RNA–Protein interactions for RNA: ENST00000448494.1

LINC00342-202, long intergenic non-protein coding RNA 342, humanhuman

TSL 2 BASIC

Gene LINC00342, Length 2,351 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00342-202ENST00000448494 ESPNB1AK53 854 aa13.97□□□□□ -0.17
LINC00342-202ENST00000448494 POGKQ9P215 609 aa13.97□□□□□ -0.17
LINC00342-202ENST00000448494 LAMC3Q9Y6N6 1575 aa13.97□□□□□ -0.17
LINC00342-202ENST00000448494 XRCC6P12956 609 aaKnown RBP eCLIP13.96□□□□□ -0.17
LINC00342-202ENST00000448494 MROH2BQ7Z745 1585 aa13.96□□□□□ -0.17
LINC00342-202ENST00000448494 FSD2A1L4K1 749 aa13.96□□□□□ -0.18
LINC00342-202ENST00000448494 DMTNQ08495 405 aa13.96□□□□□ -0.18
LINC00342-202ENST00000448494 GOLGA6L3A6NEY3 463 aa13.95□□□□□ -0.18
LINC00342-202ENST00000448494 KIF21AQ7Z4S6 1674 aa13.94□□□□□ -0.18
LINC00342-202ENST00000448494 TMEM51Q9NW97 253 aa13.94□□□□□ -0.18
LINC00342-202ENST00000448494 ARID4BQ4LE39 1312 aaPredicted RBP13.94□□□□□ -0.18
LINC00342-202ENST00000448494 HIRIP3Q9BW71 556 aaPredicted RBP13.94□□□□□ -0.18
LINC00342-202ENST00000448494 BAZ1BQ9UIG0 1483 aaKnown RBP13.94□□□□□ -0.18
LINC00342-202ENST00000448494 RAB3GAP2Q9H2M9 1393 aa13.93□□□□□ -0.18
LINC00342-202ENST00000448494 TEX2Q8IWB9 1127 aa13.93□□□□□ -0.18
LINC00342-202ENST00000448494 ZHX1Q9UKY1 873 aaPredicted RBP13.93□□□□□ -0.18
LINC00342-202ENST00000448494 KIF21BO75037 1637 aa13.92□□□□□ -0.18
LINC00342-202ENST00000448494 SLC4A3P48751 1232 aa13.92□□□□□ -0.18
LINC00342-202ENST00000448494 CHRM1P11229 460 aaPredicted RBP13.91□□□□□ -0.18
LINC00342-202ENST00000448494 VGFO15240 615 aaPredicted RBP13.91□□□□□ -0.18
LINC00342-202ENST00000448494 TNNT2P45379 298 aaPredicted RBP13.91□□□□□ -0.18
LINC00342-202ENST00000448494 PPP4R3BQ5MIZ7 849 aa13.9□□□□□ -0.18
LINC00342-202ENST00000448494 KIAA1211Q6ZU35 1233 aa13.9□□□□□ -0.18
LINC00342-202ENST00000448494 KIF20AO95235 890 aa13.9□□□□□ -0.18
LINC00342-202ENST00000448494 FAM9BQ8IZU0 186 aa13.88□□□□□ -0.19
LINC00342-202ENST00000448494 ZFP91Q96JP5 570 aaPredicted RBP13.88□□□□□ -0.19
LINC00342-202ENST00000448494 MRE11P49959 708 aa13.88□□□□□ -0.19
LINC00342-202ENST00000448494 CCNB3Q8WWL7 1395 aa13.87□□□□□ -0.19
LINC00342-202ENST00000448494 RIPK4P57078 832 aa13.87□□□□□ -0.19
LINC00342-202ENST00000448494 ZNF830Q96NB3 372 aaPredicted RBP13.87□□□□□ -0.19
LINC00342-202ENST00000448494 NCOA2Q15596 1464 aa13.87□□□□□ -0.19
LINC00342-202ENST00000448494 FHAD1B1AJZ9 1412 aa13.86□□□□□ -0.19
LINC00342-202ENST00000448494 CCDC184Q52MB2 194 aa13.86□□□□□ -0.19
LINC00342-202ENST00000448494 TAF3Q5VWG9 929 aa13.86□□□□□ -0.19
LINC00342-202ENST00000448494 ISY1Q9ULR0 285 aaKnown RBP13.86□□□□□ -0.19
LINC00342-202ENST00000448494 PDS5BQ9NTI5 1447 aa13.86□□□□□ -0.19
LINC00342-202ENST00000448494 GTPBP4Q9BZE4 634 aaKnown RBP13.86□□□□□ -0.19
LINC00342-202ENST00000448494 MRS2Q9HD23 443 aa13.86□□□□□ -0.19
LINC00342-202ENST00000448494 CNTLNQ9NXG0 1405 aa13.85□□□□□ -0.19
LINC00342-202ENST00000448494 ERBB4Q15303 1308 aa13.85□□□□□ -0.19
LINC00342-202ENST00000448494 MYH16Q9H6N6 1097 aa13.85□□□□□ -0.19
LINC00342-202ENST00000448494 WIZO95785 1651 aa13.84□□□□□ -0.19
LINC00342-202ENST00000448494 PANK2Q9BZ23 570 aa13.84□□□□□ -0.19
LINC00342-202ENST00000448494 SETD5Q9C0A6 1442 aa13.84□□□□□ -0.19
LINC00342-202ENST00000448494 OFD1O75665 1012 aa13.83□□□□□ -0.19
LINC00342-202ENST00000448494 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.83□□□□□ -0.19
LINC00342-202ENST00000448494 ANP32BQ92688 251 aaKnown RBP13.83□□□□□ -0.2
LINC00342-202ENST00000448494 CHMP4AQ9BY43 222 aa13.83□□□□□ -0.2
LINC00342-202ENST00000448494 RUSC2Q8N2Y8 1516 aa13.82□□□□□ -0.2
LINC00342-202ENST00000448494 LETM1O95202 739 aaPredicted RBP13.82□□□□□ -0.2
LINC00342-202ENST00000448494 ZSCAN20P17040 1043 aaPredicted RBP13.82□□□□□ -0.2
LINC00342-202ENST00000448494 PRKRIP1Q9H875 184 aaPredicted RBP13.82□□□□□ -0.2
LINC00342-202ENST00000448494 TRIM44Q96DX7 344 aaPredicted RBP13.82□□□□□ -0.2
LINC00342-202ENST00000448494 DHX37Q8IY37 1157 aaKnown RBP13.81□□□□□ -0.2
LINC00342-202ENST00000448494 FAM13BQ9NYF5 915 aa13.8□□□□□ -0.2
LINC00342-202ENST00000448494 RRP1P56182 461 aaKnown RBP13.8□□□□□ -0.2
LINC00342-202ENST00000448494 FOXD1Q16676 465 aa13.8□□□□□ -0.2
LINC00342-202ENST00000448494 WDR62O43379 1518 aa13.79□□□□□ -0.2
LINC00342-202ENST00000448494 MRC2Q9UBG0 1479 aa13.79□□□□□ -0.2
LINC00342-202ENST00000448494 EXOC6Q8TAG9 804 aa13.79□□□□□ -0.2
LINC00342-202ENST00000448494 PLCD3Q8N3E9 789 aa13.79□□□□□ -0.2
LINC00342-202ENST00000448494 SECISBP2LQ93073 1101 aaKnown RBP13.79□□□□□ -0.2
LINC00342-202ENST00000448494 FAM161AQ3B820 660 aa13.78□□□□□ -0.2
LINC00342-202ENST00000448494 CCDC94Q9BW85 323 aaPredicted RBP13.78□□□□□ -0.2
LINC00342-202ENST00000448494 BCCIPQ9P287 314 aaKnown RBP eCLIP13.77□□□□□ -0.21
LINC00342-202ENST00000448494 PRDM10Q9NQV6 1147 aa13.76□□□□□ -0.21
LINC00342-202ENST00000448494 PHLDB1Q86UU1 1377 aa13.75□□□□□ -0.21
LINC00342-202ENST00000448494 DYNC1I1O14576 645 aa13.75□□□□□ -0.21
LINC00342-202ENST00000448494 GRPEL1Q9HAV7 217 aa13.75□□□□□ -0.21
LINC00342-202ENST00000448494 ERICH3Q5RHP9 1530 aa13.75□□□□□ -0.21
LINC00342-202ENST00000448494 TOP2AP11388 1531 aaKnown RBP13.75□□□□□ -0.21
LINC00342-202ENST00000448494 TONSLQ96HA7 1378 aa13.74□□□□□ -0.21
LINC00342-202ENST00000448494 VGLL3A8MV65 326 aa13.74□□□□□ -0.21
LINC00342-202ENST00000448494 CADPSQ9ULU8 1353 aa13.73□□□□□ -0.21
LINC00342-202ENST00000448494 CDK11BP21127 795 aaKnown RBP13.73□□□□□ -0.21
LINC00342-202ENST00000448494 BECN1Q14457 450 aa13.72□□□□□ -0.21
LINC00342-202ENST00000448494 C8orf34Q49A92 452 aa13.72□□□□□ -0.21
LINC00342-202ENST00000448494 IRX3P78415 501 aaPredicted RBP13.72□□□□□ -0.21
LINC00342-202ENST00000448494 KANK4Q5T7N3 995 aaPredicted RBP13.72□□□□□ -0.21
LINC00342-202ENST00000448494 ZSCAN30Q86W11 494 aa13.72□□□□□ -0.21
LINC00342-202ENST00000448494 RGS22Q8NE09 1264 aa13.72□□□□□ -0.21
LINC00342-202ENST00000448494 RNF216Q9NWF9 866 aaPredicted RBP13.71□□□□□ -0.21
LINC00342-202ENST00000448494 SLC20A2Q08357 652 aa13.71□□□□□ -0.22
LINC00342-202ENST00000448494 KTN1Q86UP2 1357 aaKnown RBP13.7□□□□□ -0.22
LINC00342-202ENST00000448494 SAMD1Q6SPF0 538 aaPredicted RBP13.7□□□□□ -0.22
LINC00342-202ENST00000448494 HOMEZQ8IX15 550 aa13.7□□□□□ -0.22
LINC00342-202ENST00000448494 ANTXR1Q9H6X2 564 aa13.69□□□□□ -0.22
LINC00342-202ENST00000448494 DNTTIP2Q5QJE6 756 aaKnown RBP13.68□□□□□ -0.22
LINC00342-202ENST00000448494 UQCRHLA0A096LP55 91 aa13.68□□□□□ -0.22
LINC00342-202ENST00000448494 UQCRHP07919 91 aa13.68□□□□□ -0.22
LINC00342-202ENST00000448494 MCM4P33991 863 aa13.67□□□□□ -0.22
LINC00342-202ENST00000448494 SYNJ1O43426 1573 aa13.67□□□□□ -0.22
LINC00342-202ENST00000448494 CCDC173Q0VFZ6 552 aa13.66□□□□□ -0.22
LINC00342-202ENST00000448494 MSNP26038 577 aaKnown RBP13.65□□□□□ -0.22
LINC00342-202ENST00000448494 PPP1R9BQ96SB3 815 aa13.65□□□□□ -0.22
LINC00342-202ENST00000448494 RCAN3Q9UKA8 241 aa13.65□□□□□ -0.22
LINC00342-202ENST00000448494 R3HCC1Q9Y3T6 440 aaKnown RBP13.65□□□□□ -0.22
LINC00342-202ENST00000448494 MAP3K1Q13233 1512 aa13.65□□□□□ -0.22
LINC00342-202ENST00000448494 ABCA5Q8WWZ7 1642 aa13.64□□□□□ -0.23
LINC00342-202ENST00000448494 TRAK2O60296 914 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 81.5 ms