RNA–Protein interactions for RNA: ENST00000447024.5

SMARCE1-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 3

Gene SMARCE1, Length 536 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-206ENST00000447024 NLRP6P59044 892 aa17.05■□□□□ 0.32
SMARCE1-206ENST00000447024 KRTAP3-3Q9BYR6 98 aa17.05■□□□□ 0.32
SMARCE1-206ENST00000447024 KRTAP3-2Q9BYR7 98 aa17.05■□□□□ 0.32
SMARCE1-206ENST00000447024 FBXO22Q8NEZ5 403 aa17.04■□□□□ 0.32
SMARCE1-206ENST00000447024 STK25O00506 426 aa17.01■□□□□ 0.31
SMARCE1-206ENST00000447024 RIMBP2O15034 1052 aa17■□□□□ 0.31
SMARCE1-206ENST00000447024 PKD2Q13563 968 aa16.99■□□□□ 0.31
SMARCE1-206ENST00000447024 MFRPQ9BY79 579 aa16.98■□□□□ 0.31
SMARCE1-206ENST00000447024 RGL2O15211 777 aa16.96■□□□□ 0.31
SMARCE1-206ENST00000447024 ERBB3P21860 1342 aa16.95■□□□□ 0.3
SMARCE1-206ENST00000447024 ZSWIM6Q9HCJ5 1215 aa16.93■□□□□ 0.3
SMARCE1-206ENST00000447024 GPR153Q6NV75 609 aa16.88■□□□□ 0.29
SMARCE1-206ENST00000447024 VARS2Q5ST30 1063 aaKnown RBP16.86■□□□□ 0.29
SMARCE1-206ENST00000447024 CCDC180Q9P1Z9 1646 aa16.79■□□□□ 0.28
SMARCE1-206ENST00000447024 KIF3CO14782 793 aa16.78■□□□□ 0.28
SMARCE1-206ENST00000447024 ARSIQ5FYB1 569 aa16.78■□□□□ 0.28
SMARCE1-206ENST00000447024 C2orf72A6NCS6 295 aa16.76■□□□□ 0.27
SMARCE1-206ENST00000447024 ZNF687Q8N1G0 1237 aa16.74■□□□□ 0.27
SMARCE1-206ENST00000447024 KHSRPQ92945 711 aaKnown RBP eCLIP16.74■□□□□ 0.272e-8■■■■■ 30.3
SMARCE1-206ENST00000447024 PPP1R37O75864 691 aa16.68■□□□□ 0.26
SMARCE1-206ENST00000447024 ZNF316A6NFI3 1004 aaPredicted RBP16.65■□□□□ 0.26
SMARCE1-206ENST00000447024 TMC2Q8TDI7 906 aa16.64■□□□□ 0.25
SMARCE1-206ENST00000447024 NUDT7P0C024 238 aa16.6■□□□□ 0.25
SMARCE1-206ENST00000447024 HS6ST3Q8IZP7 471 aa16.6■□□□□ 0.25
SMARCE1-206ENST00000447024 SLC34A2O95436 690 aa16.59■□□□□ 0.25
SMARCE1-206ENST00000447024 RNF166Q96A37 237 aaPredicted RBP16.57■□□□□ 0.24
SMARCE1-206ENST00000447024 PCDHGA4Q9Y5G9 962 aa16.57■□□□□ 0.24
SMARCE1-206ENST00000447024 MYT1LQ9UL68 1186 aa16.53■□□□□ 0.24
SMARCE1-206ENST00000447024 LHX6Q9UPM6 363 aa16.51■□□□□ 0.23
SMARCE1-206ENST00000447024 CHGAP10645 457 aaKnown RBP16.49■□□□□ 0.23
SMARCE1-206ENST00000447024 ANKRD13DQ6ZTN6 518 aa16.48■□□□□ 0.23
SMARCE1-206ENST00000447024 PTGER2P43116 358 aa16.46■□□□□ 0.23
SMARCE1-206ENST00000447024 LSM11P83369 360 aaKnown RBP eCLIP16.46■□□□□ 0.23
SMARCE1-206ENST00000447024 PBX2P40425 430 aa16.42■□□□□ 0.22
SMARCE1-206ENST00000447024 FOXK1P85037 733 aa16.42■□□□□ 0.22
SMARCE1-206ENST00000447024 POTEEQ6S8J3 1075 aa16.42■□□□□ 0.22
SMARCE1-206ENST00000447024 GPHNQ9NQX3 736 aaPredicted RBP16.4■□□□□ 0.22
SMARCE1-206ENST00000447024 NKX1-1Q15270 411 aaPredicted RBP16.39■□□□□ 0.21
SMARCE1-206ENST00000447024 PLPP6Q8IY26 295 aa16.39■□□□□ 0.21
SMARCE1-206ENST00000447024 PTCD2Q8WV60 388 aaKnown RBP16.39■□□□□ 0.21
SMARCE1-206ENST00000447024 ABCC9O60706 1549 aa16.39■□□□□ 0.21
SMARCE1-206ENST00000447024 DNAJC5Q9H3Z4 198 aa16.38■□□□□ 0.21
SMARCE1-206ENST00000447024 AXIN2Q9Y2T1 843 aa16.38■□□□□ 0.21
SMARCE1-206ENST00000447024 KDM4FA0A1W2PPD8 638 aa16.36■□□□□ 0.21
SMARCE1-206ENST00000447024 DSG2Q14126 1118 aa16.36■□□□□ 0.21
SMARCE1-206ENST00000447024 PSDA5PKW4 1024 aaPredicted RBP16.32■□□□□ 0.2
SMARCE1-206ENST00000447024 RYDENQ9NUL5 291 aaKnown RBP16.28■□□□□ 0.2
SMARCE1-206ENST00000447024 ARHGAP33O14559 1287 aa16.26■□□□□ 0.19
SMARCE1-206ENST00000447024 TBC1D12O60347 775 aa16.23■□□□□ 0.19
SMARCE1-206ENST00000447024 CRISPLD2Q9H0B8 497 aa16.22■□□□□ 0.19
SMARCE1-206ENST00000447024 ADGRD1Q6QNK2 874 aa16.21■□□□□ 0.19
SMARCE1-206ENST00000447024 PPP4R3BQ5MIZ7 849 aa16.19■□□□□ 0.18
SMARCE1-206ENST00000447024 PSEN2P49810 448 aa16.18■□□□□ 0.18
SMARCE1-206ENST00000447024 DMRTA1Q5VZB9 504 aa16.17■□□□□ 0.18
SMARCE1-206ENST00000447024 OXER1Q8TDS5 423 aa16.17■□□□□ 0.18
SMARCE1-206ENST00000447024 UPF1Q92900 1129 aaKnown RBP eCLIP16.16■□□□□ 0.18
SMARCE1-206ENST00000447024 PPP1R15BQ5SWA1 713 aa16.15■□□□□ 0.18
SMARCE1-206ENST00000447024 NCKAP5LQ9HCH0 1330 aa16.14■□□□□ 0.17
SMARCE1-206ENST00000447024 TK2O00142 265 aa16.12■□□□□ 0.17
SMARCE1-206ENST00000447024 GTPBP6O43824 516 aaPredicted RBP16.12■□□□□ 0.17
SMARCE1-206ENST00000447024 HRO43593 1189 aa16.09■□□□□ 0.17
SMARCE1-206ENST00000447024 PDE4AP27815 886 aa16.08■□□□□ 0.16
SMARCE1-206ENST00000447024 KCNK17Q96T54 332 aa16.07■□□□□ 0.16
SMARCE1-206ENST00000447024 ZNF454Q8N9F8 522 aa16.05■□□□□ 0.16
SMARCE1-206ENST00000447024 DCAF8L2P0C7V8 631 aa16.03■□□□□ 0.16
SMARCE1-206ENST00000447024 HCSTQ9UBK5 93 aa16.03■□□□□ 0.16
SMARCE1-206ENST00000447024 KCNH8Q96L42 1107 aa16.02■□□□□ 0.16
SMARCE1-206ENST00000447024 LARP6Q9BRS8 491 aaKnown RBP16■□□□□ 0.15
SMARCE1-206ENST00000447024 FOSBP53539 338 aa15.98■□□□□ 0.15
SMARCE1-206ENST00000447024 DDX27Q96GQ7 796 aaKnown RBP15.98■□□□□ 0.15
SMARCE1-206ENST00000447024 BCL2L12Q9HB09 334 aa15.98■□□□□ 0.15
SMARCE1-206ENST00000447024 MFSD10Q14728 455 aa15.95■□□□□ 0.14
SMARCE1-206ENST00000447024 ANO8Q9HCE9 1232 aaPredicted RBP15.95■□□□□ 0.14
SMARCE1-206ENST00000447024 PLA2G2EQ9NZK7 142 aa15.95■□□□□ 0.14
SMARCE1-206ENST00000447024 VPS9D1Q9Y2B5 631 aa15.95■□□□□ 0.14
SMARCE1-206ENST00000447024 EVI5O60447 810 aa15.94■□□□□ 0.14
SMARCE1-206ENST00000447024 KCTD12Q96CX2 325 aaKnown RBP15.94■□□□□ 0.14
SMARCE1-206ENST00000447024 STAC3Q96MF2 364 aa15.94■□□□□ 0.14
SMARCE1-206ENST00000447024 JPH4Q96JJ6 628 aa15.92■□□□□ 0.14
SMARCE1-206ENST00000447024 PTPREP23469 700 aa15.9■□□□□ 0.14
SMARCE1-206ENST00000447024 SLC4A5Q9BY07 1137 aa15.89■□□□□ 0.13
SMARCE1-206ENST00000447024 MAP3K9P80192 1104 aa15.87■□□□□ 0.13
SMARCE1-206ENST00000447024 EMILIN3Q9NT22 766 aa15.87■□□□□ 0.13
SMARCE1-206ENST00000447024 CADPS2Q86UW7 1296 aa15.86■□□□□ 0.13
SMARCE1-206ENST00000447024 ZDHHC16Q969W1 377 aa15.85■□□□□ 0.13
SMARCE1-206ENST00000447024 ADAM33Q9BZ11 813 aa15.85■□□□□ 0.13
SMARCE1-206ENST00000447024 ZBED2Q9BTP6 218 aa15.84■□□□□ 0.13
SMARCE1-206ENST00000447024 RB1CC1Q8TDY2 1594 aa15.83■□□□□ 0.13
SMARCE1-206ENST00000447024 NACADO15069 1562 aa15.83■□□□□ 0.12
SMARCE1-206ENST00000447024 BHMG1C9JSJ3 638 aaPredicted RBP15.81■□□□□ 0.12
SMARCE1-206ENST00000447024 MYO15BQ96JP2 1530 aa15.78■□□□□ 0.12
SMARCE1-206ENST00000447024 PTPN5P54829 565 aa15.76■□□□□ 0.11
SMARCE1-206ENST00000447024 PCDHGA10Q9Y5H3 936 aa15.76■□□□□ 0.11
SMARCE1-206ENST00000447024 THSD4Q6ZMP0 1018 aa15.72■□□□□ 0.11
SMARCE1-206ENST00000447024 MRPL50Q8N5N7 158 aaKnown RBP15.72■□□□□ 0.11
SMARCE1-206ENST00000447024 PPP1R3GB7ZBB8 358 aa15.71■□□□□ 0.11
SMARCE1-206ENST00000447024 GOLGA8CPA6NN73 597 aa15.7■□□□□ 0.1
SMARCE1-206ENST00000447024 CAMK2BQ13554 666 aa15.69■□□□□ 0.1
SMARCE1-206ENST00000447024 WNT2BQ93097 391 aa15.69■□□□□ 0.1
SMARCE1-206ENST00000447024 NBPF3Q9H094 633 aa15.69■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms