RNA–Protein interactions for RNA: ENST00000442225.5

MDH1-207, Transcript of malate dehydrogenase 1, humanhuman

TSL 5

Gene MDH1, Length 785 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDH1-207ENST00000442225 STK24Q9Y6E0 443 aa10.26□□□□□ -0.77
MDH1-207ENST00000442225 CDAN1Q8IWY9 1227 aa10.24□□□□□ -0.77
MDH1-207ENST00000442225 FBXO22Q8NEZ5 403 aa10.24□□□□□ -0.77
MDH1-207ENST00000442225 CUX2O14529 1486 aa10.22□□□□□ -0.77
MDH1-207ENST00000442225 MFRPQ9BY79 579 aa10.21□□□□□ -0.77
MDH1-207ENST00000442225 SHROOM4Q9ULL8 1493 aa10.21□□□□□ -0.78
MDH1-207ENST00000442225 HOXB3P14651 431 aaPredicted RBP10.2□□□□□ -0.78
MDH1-207ENST00000442225 DOK7Q18PE1 504 aa10.18□□□□□ -0.78
MDH1-207ENST00000442225 MARVELD3Q96A59 401 aa10.18□□□□□ -0.78
MDH1-207ENST00000442225 TMEM92Q6UXU6 159 aa10.17□□□□□ -0.78
MDH1-207ENST00000442225 EMP3P54852 163 aa10.15□□□□□ -0.78
MDH1-207ENST00000442225 ERCC6Q03468 1493 aa10.13□□□□□ -0.79
MDH1-207ENST00000442225 RIMBP2O15034 1052 aa10.13□□□□□ -0.79
MDH1-207ENST00000442225 HOXB1P14653 301 aaPredicted RBP10.13□□□□□ -0.79
MDH1-207ENST00000442225 ZNF710Q8N1W2 664 aa10.13□□□□□ -0.79
MDH1-207ENST00000442225 ZSWIM6Q9HCJ5 1215 aa10.13□□□□□ -0.79
MDH1-207ENST00000442225 MYO15BQ96JP2 1530 aa10.12□□□□□ -0.79
MDH1-207ENST00000442225 HS6ST3Q8IZP7 471 aa10.11□□□□□ -0.79
MDH1-207ENST00000442225 SCRIBQ14160 1630 aa10.09□□□□□ -0.79
MDH1-207ENST00000442225 HS3ST6Q96QI5 342 aa10.08□□□□□ -0.8
MDH1-207ENST00000442225 FAM205CA6NFA0 338 aa10.07□□□□□ -0.8
MDH1-207ENST00000442225 KIF3CO14782 793 aa10.06□□□□□ -0.8
MDH1-207ENST00000442225 POTEB3A0JP26 581 aa10.05□□□□□ -0.8
MDH1-207ENST00000442225 POTEBQ6S5H4 581 aa10.05□□□□□ -0.8
MDH1-207ENST00000442225 GPR153Q6NV75 609 aa10.03□□□□□ -0.8
MDH1-207ENST00000442225 C2orf72A6NCS6 295 aa10.01□□□□□ -0.81
MDH1-207ENST00000442225 CHGAP10645 457 aaKnown RBP10.01□□□□□ -0.81
MDH1-207ENST00000442225 PPP1R37O75864 691 aa10□□□□□ -0.81
MDH1-207ENST00000442225 SPNS2Q8IVW8 549 aa10□□□□□ -0.81
MDH1-207ENST00000442225 ERBB3P21860 1342 aa10□□□□□ -0.81
MDH1-207ENST00000442225 KRTAP3-3Q9BYR6 98 aa9.99□□□□□ -0.81
MDH1-207ENST00000442225 KRTAP3-2Q9BYR7 98 aa9.99□□□□□ -0.81
MDH1-207ENST00000442225 RYDENQ9NUL5 291 aaKnown RBP9.98□□□□□ -0.81
MDH1-207ENST00000442225 SLC34A2O95436 690 aa9.97□□□□□ -0.81
MDH1-207ENST00000442225 TMC2Q8TDI7 906 aa9.97□□□□□ -0.81
MDH1-207ENST00000442225 ARSIQ5FYB1 569 aa9.95□□□□□ -0.82
MDH1-207ENST00000442225 MMRN1Q13201 1228 aa9.94□□□□□ -0.82
MDH1-207ENST00000442225 VARS2Q5ST30 1063 aaKnown RBP9.94□□□□□ -0.82
MDH1-207ENST00000442225 NKX1-1Q15270 411 aaPredicted RBP9.93□□□□□ -0.82
MDH1-207ENST00000442225 ZNF687Q8N1G0 1237 aa9.92□□□□□ -0.82
MDH1-207ENST00000442225 GPHNQ9NQX3 736 aaPredicted RBP9.9□□□□□ -0.82
MDH1-207ENST00000442225 ZNF316A6NFI3 1004 aaPredicted RBP9.89□□□□□ -0.83
MDH1-207ENST00000442225 FOXK1P85037 733 aa9.89□□□□□ -0.83
MDH1-207ENST00000442225 PCDHGA4Q9Y5G9 962 aa9.88□□□□□ -0.83
MDH1-207ENST00000442225 KHSRPQ92945 711 aaKnown RBP eCLIP9.87□□□□□ -0.832e-8■■□□□ 14.2
MDH1-207ENST00000442225 PTCD2Q8WV60 388 aaKnown RBP9.85□□□□□ -0.83
MDH1-207ENST00000442225 NESP48681 1621 aa9.83□□□□□ -0.84
MDH1-207ENST00000442225 NUDT7P0C024 238 aa9.83□□□□□ -0.84
MDH1-207ENST00000442225 PLPP6Q8IY26 295 aa9.83□□□□□ -0.84
MDH1-207ENST00000442225 THOC2Q8NI27 1593 aaKnown RBP9.83□□□□□ -0.84
MDH1-207ENST00000442225 KDM4FA0A1W2PPD8 638 aa9.81□□□□□ -0.84
MDH1-207ENST00000442225 GTPBP6O43824 516 aaPredicted RBP9.81□□□□□ -0.84
MDH1-207ENST00000442225 DSG2Q14126 1118 aa9.81□□□□□ -0.84
MDH1-207ENST00000442225 PSDA5PKW4 1024 aaPredicted RBP9.8□□□□□ -0.84
MDH1-207ENST00000442225 PBX2P40425 430 aa9.8□□□□□ -0.84
MDH1-207ENST00000442225 CRISPLD2Q9H0B8 497 aa9.8□□□□□ -0.84
MDH1-207ENST00000442225 DCAF1Q9Y4B6 1507 aa9.8□□□□□ -0.84
MDH1-207ENST00000442225 ZCCHC6Q5VYS8 1495 aaKnown RBP9.79□□□□□ -0.84
MDH1-207ENST00000442225 LHX6Q9UPM6 363 aa9.79□□□□□ -0.84
MDH1-207ENST00000442225 SMARCA2P51531 1590 aa9.79□□□□□ -0.84
MDH1-207ENST00000442225 TBC1D12O60347 775 aa9.78□□□□□ -0.84
MDH1-207ENST00000442225 PTGER2P43116 358 aa9.77□□□□□ -0.85
MDH1-207ENST00000442225 PDE4AP27815 886 aa9.75□□□□□ -0.85
MDH1-207ENST00000442225 KIF21AQ7Z4S6 1674 aa9.74□□□□□ -0.85
MDH1-207ENST00000442225 LSM11P83369 360 aaKnown RBP eCLIP9.74□□□□□ -0.85
MDH1-207ENST00000442225 BAZ1AQ9NRL2 1556 aaPredicted RBP9.74□□□□□ -0.85
MDH1-207ENST00000442225 OXER1Q8TDS5 423 aa9.73□□□□□ -0.85
MDH1-207ENST00000442225 NCKAP5LQ9HCH0 1330 aa9.73□□□□□ -0.85
MDH1-207ENST00000442225 PPP1R15BQ5SWA1 713 aa9.72□□□□□ -0.85
MDH1-207ENST00000442225 MYT1LQ9UL68 1186 aa9.71□□□□□ -0.86
MDH1-207ENST00000442225 POTEEQ6S8J3 1075 aa9.7□□□□□ -0.86
MDH1-207ENST00000442225 ANKRD13DQ6ZTN6 518 aa9.7□□□□□ -0.86
MDH1-207ENST00000442225 RNF166Q96A37 237 aaPredicted RBP9.7□□□□□ -0.86
MDH1-207ENST00000442225 NCAPD3P42695 1498 aa9.7□□□□□ -0.86
MDH1-207ENST00000442225 ARHGAP33O14559 1287 aa9.68□□□□□ -0.86
MDH1-207ENST00000442225 MFSD10Q14728 455 aa9.68□□□□□ -0.86
MDH1-207ENST00000442225 RIMBP3CA6NJZ7 1639 aa9.67□□□□□ -0.86
MDH1-207ENST00000442225 RIMBP3BA6NNM3 1639 aa9.67□□□□□ -0.86
MDH1-207ENST00000442225 RIMBP3Q9UFD9 1639 aa9.67□□□□□ -0.86
MDH1-207ENST00000442225 AMER1Q5JTC6 1135 aaPredicted RBP9.66□□□□□ -0.86
MDH1-207ENST00000442225 PPP4R3BQ5MIZ7 849 aa9.66□□□□□ -0.86
MDH1-207ENST00000442225 DDX27Q96GQ7 796 aaKnown RBP9.66□□□□□ -0.86
MDH1-207ENST00000442225 LARP6Q9BRS8 491 aaKnown RBP9.65□□□□□ -0.86
MDH1-207ENST00000442225 AXIN2Q9Y2T1 843 aa9.65□□□□□ -0.86
MDH1-207ENST00000442225 LAMC3Q9Y6N6 1575 aa9.64□□□□□ -0.87
MDH1-207ENST00000442225 BBXQ8WY36 941 aaPredicted RBP9.64□□□□□ -0.87
MDH1-207ENST00000442225 TK2O00142 265 aa9.63□□□□□ -0.87
MDH1-207ENST00000442225 UPF1Q92900 1129 aaKnown RBP eCLIP9.63□□□□□ -0.87
MDH1-207ENST00000442225 ANO8Q9HCE9 1232 aaPredicted RBP9.63□□□□□ -0.87
MDH1-207ENST00000442225 ATAD2BQ9ULI0 1458 aa9.62□□□□□ -0.87
MDH1-207ENST00000442225 HMGXB3Q12766 1538 aa9.61□□□□□ -0.87
MDH1-207ENST00000442225 PDS5BQ9NTI5 1447 aa9.6□□□□□ -0.87
MDH1-207ENST00000442225 ADGRD1Q6QNK2 874 aa9.6□□□□□ -0.87
MDH1-207ENST00000442225 FOSBP53539 338 aa9.58□□□□□ -0.88
MDH1-207ENST00000442225 CADPS2Q86UW7 1296 aa9.58□□□□□ -0.88
MDH1-207ENST00000442225 KCNH8Q96L42 1107 aa9.58□□□□□ -0.88
MDH1-207ENST00000442225 EVI5O60447 810 aa9.57□□□□□ -0.88
MDH1-207ENST00000442225 PSEN2P49810 448 aa9.57□□□□□ -0.88
MDH1-207ENST00000442225 BCL2L12Q9HB09 334 aa9.57□□□□□ -0.88
MDH1-207ENST00000442225 HRO43593 1189 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 96.4 ms