RNA–Protein interactions for RNA: ENST00000438923.1

AC005550.1-201, humanhuman

TSL 2 BASIC

Gene AC005550.1, Length 312 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC005550.1-201ENST00000438923 DPY19L2Q6NUT2 758 aa13.41□□□□□ -0.26
AC005550.1-201ENST00000438923 BOLA1Q9Y3E2 137 aa13.41□□□□□ -0.26
AC005550.1-201ENST00000438923 ERCC6Q03468 1493 aa13.41□□□□□ -0.26
AC005550.1-201ENST00000438923 ILDR1Q86SU0 546 aaPredicted RBP13.37□□□□□ -0.27
AC005550.1-201ENST00000438923 CADPSQ9ULU8 1353 aa13.33□□□□□ -0.27
AC005550.1-201ENST00000438923 EFCAB3Q8N7B9 438 aa13.32□□□□□ -0.28
AC005550.1-201ENST00000438923 LAMC3Q9Y6N6 1575 aa13.31□□□□□ -0.28
AC005550.1-201ENST00000438923 CUX2O14529 1486 aa13.3□□□□□ -0.28
AC005550.1-201ENST00000438923 ZNF710Q8N1W2 664 aa13.3□□□□□ -0.28
AC005550.1-201ENST00000438923 FAM205CA6NFA0 338 aa13.29□□□□□ -0.28
AC005550.1-201ENST00000438923 PDS5BQ9NTI5 1447 aa13.29□□□□□ -0.28
AC005550.1-201ENST00000438923 RIOK3O14730 519 aaKnown RBP13.28□□□□□ -0.28
AC005550.1-201ENST00000438923 TOP2AP11388 1531 aaKnown RBP13.27□□□□□ -0.29
AC005550.1-201ENST00000438923 SPNS2Q8IVW8 549 aa13.26□□□□□ -0.29
AC005550.1-201ENST00000438923 HS3ST6Q96QI5 342 aa13.25□□□□□ -0.29
AC005550.1-201ENST00000438923 MMRN1Q13201 1228 aa13.24□□□□□ -0.29
AC005550.1-201ENST00000438923 DOK7Q18PE1 504 aa13.24□□□□□ -0.29
AC005550.1-201ENST00000438923 RIMBP2O15034 1052 aa13.22□□□□□ -0.29
AC005550.1-201ENST00000438923 VGFO15240 615 aaPredicted RBP13.22□□□□□ -0.29
AC005550.1-201ENST00000438923 DNAJC5Q9H3Z4 198 aa13.22□□□□□ -0.29
AC005550.1-201ENST00000438923 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.21□□□□□ -0.29
AC005550.1-201ENST00000438923 ZFP91Q96JP5 570 aaPredicted RBP13.21□□□□□ -0.29
AC005550.1-201ENST00000438923 SOX12O15370 315 aa13.2□□□□□ -0.3
AC005550.1-201ENST00000438923 KIF21AQ7Z4S6 1674 aa13.19□□□□□ -0.3
AC005550.1-201ENST00000438923 TAOK2Q9UL54 1235 aa13.19□□□□□ -0.3
AC005550.1-201ENST00000438923 CFTRP13569 1480 aa13.18□□□□□ -0.3
AC005550.1-201ENST00000438923 THOC2Q8NI27 1593 aaKnown RBP13.18□□□□□ -0.3
AC005550.1-201ENST00000438923 HOXB3P14651 431 aaPredicted RBP13.16□□□□□ -0.3
AC005550.1-201ENST00000438923 MICALL2Q8IY33 904 aa13.16□□□□□ -0.3
AC005550.1-201ENST00000438923 CCDC88BA6NC98 1476 aa13.16□□□□□ -0.3
AC005550.1-201ENST00000438923 RNF25Q96BH1 459 aaPredicted RBP13.15□□□□□ -0.3
AC005550.1-201ENST00000438923 ERBB3P21860 1342 aa13.14□□□□□ -0.31
AC005550.1-201ENST00000438923 HOXB1P14653 301 aaPredicted RBP13.14□□□□□ -0.31
AC005550.1-201ENST00000438923 FANCD2Q9BXW9 1451 aa13.14□□□□□ -0.31
AC005550.1-201ENST00000438923 MRC2Q9UBG0 1479 aa13.13□□□□□ -0.31
AC005550.1-201ENST00000438923 POTEB3A0JP26 581 aa13.12□□□□□ -0.31
AC005550.1-201ENST00000438923 POTEBQ6S5H4 581 aa13.12□□□□□ -0.31
AC005550.1-201ENST00000438923 PHF8Q9UPP1 1060 aa13.12□□□□□ -0.31
AC005550.1-201ENST00000438923 CEP164Q9UPV0 1460 aa13.1□□□□□ -0.31
AC005550.1-201ENST00000438923 KRTAP3-3Q9BYR6 98 aa13.09□□□□□ -0.31
AC005550.1-201ENST00000438923 KRTAP3-2Q9BYR7 98 aa13.09□□□□□ -0.31
AC005550.1-201ENST00000438923 NLRP6P59044 892 aa13.07□□□□□ -0.32
AC005550.1-201ENST00000438923 BCL11BQ9C0K0 894 aaPredicted RBP13.07□□□□□ -0.32
AC005550.1-201ENST00000438923 STK24Q9Y6E0 443 aa13.07□□□□□ -0.32
AC005550.1-201ENST00000438923 WDR62O43379 1518 aa13.06□□□□□ -0.32
AC005550.1-201ENST00000438923 MS4A4AQ96JQ5 239 aa13.05□□□□□ -0.32
AC005550.1-201ENST00000438923 ZSWIM6Q9HCJ5 1215 aa13.04□□□□□ -0.32
AC005550.1-201ENST00000438923 VARS2Q5ST30 1063 aaKnown RBP13.03□□□□□ -0.32
AC005550.1-201ENST00000438923 TMEM92Q6UXU6 159 aa13.02□□□□□ -0.33
AC005550.1-201ENST00000438923 URB2Q14146 1524 aaKnown RBP13.02□□□□□ -0.33
AC005550.1-201ENST00000438923 STK25O00506 426 aa13.01□□□□□ -0.33
AC005550.1-201ENST00000438923 ECM2O94769 699 aaPredicted RBP13.01□□□□□ -0.33
AC005550.1-201ENST00000438923 PRDM2Q13029 1718 aa12.93□□□□□ -0.34
AC005550.1-201ENST00000438923 ARSIQ5FYB1 569 aa12.92□□□□□ -0.34
AC005550.1-201ENST00000438923 FBXO22Q8NEZ5 403 aa12.92□□□□□ -0.34
AC005550.1-201ENST00000438923 GPR153Q6NV75 609 aa12.91□□□□□ -0.34
AC005550.1-201ENST00000438923 TOPBP1Q92547 1522 aa12.9□□□□□ -0.34
AC005550.1-201ENST00000438923 ZNF687Q8N1G0 1237 aa12.89□□□□□ -0.35
AC005550.1-201ENST00000438923 MFRPQ9BY79 579 aa12.89□□□□□ -0.35
AC005550.1-201ENST00000438923 RNF166Q96A37 237 aaPredicted RBP12.88□□□□□ -0.35
AC005550.1-201ENST00000438923 ABCC8Q09428 1581 aa12.88□□□□□ -0.35
AC005550.1-201ENST00000438923 IFT140Q96RY7 1462 aa12.86□□□□□ -0.35
AC005550.1-201ENST00000438923 ZNF608Q9ULD9 1512 aaPredicted RBP12.85□□□□□ -0.35
AC005550.1-201ENST00000438923 MYT1LQ9UL68 1186 aa12.84□□□□□ -0.35
AC005550.1-201ENST00000438923 DNMBPQ6XZF7 1577 aa12.83□□□□□ -0.36
AC005550.1-201ENST00000438923 TMC2Q8TDI7 906 aa12.83□□□□□ -0.36
AC005550.1-201ENST00000438923 C2orf72A6NCS6 295 aa12.82□□□□□ -0.36
AC005550.1-201ENST00000438923 ZNF316A6NFI3 1004 aaPredicted RBP12.82□□□□□ -0.36
AC005550.1-201ENST00000438923 RGL2O15211 777 aa12.82□□□□□ -0.36
AC005550.1-201ENST00000438923 ANKRD13DQ6ZTN6 518 aa12.81□□□□□ -0.36
AC005550.1-201ENST00000438923 KHSRPQ92945 711 aaKnown RBP eCLIP12.81□□□□□ -0.36
AC005550.1-201ENST00000438923 SOGA1O94964 1423 aa12.79□□□□□ -0.36
AC005550.1-201ENST00000438923 EEA1Q15075 1411 aa12.79□□□□□ -0.36
AC005550.1-201ENST00000438923 AQRO60306 1485 aaKnown RBP eCLIP12.78□□□□□ -0.36
AC005550.1-201ENST00000438923 POLA1P09884 1462 aaPredicted RBP12.78□□□□□ -0.36
AC005550.1-201ENST00000438923 PTGER2P43116 358 aa12.78□□□□□ -0.36
AC005550.1-201ENST00000438923 PKD2Q13563 968 aa12.78□□□□□ -0.36
AC005550.1-201ENST00000438923 WRNQ14191 1432 aaPredicted RBP eCLIP12.78□□□□□ -0.36
AC005550.1-201ENST00000438923 RAD54L2Q9Y4B4 1467 aa12.78□□□□□ -0.36
AC005550.1-201ENST00000438923 NUDT7P0C024 238 aa12.76□□□□□ -0.37
AC005550.1-201ENST00000438923 KIF3CO14782 793 aa12.75□□□□□ -0.37
AC005550.1-201ENST00000438923 CUX1P39880 1505 aa12.75□□□□□ -0.37
AC005550.1-201ENST00000438923 TDRD9Q8NDG6 1382 aaKnown RBP12.75□□□□□ -0.37
AC005550.1-201ENST00000438923 TARBP1Q13395 1621 aaKnown RBP12.74□□□□□ -0.37
AC005550.1-201ENST00000438923 FGD5Q6ZNL6 1462 aa12.73□□□□□ -0.37
AC005550.1-201ENST00000438923 LOC105371045A0A1W2PR82 267 aa12.73□□□□□ -0.37
AC005550.1-201ENST00000438923 PCDHGA4Q9Y5G9 962 aa12.71□□□□□ -0.37
AC005550.1-201ENST00000438923 TOP2BQ02880 1626 aa12.7□□□□□ -0.38
AC005550.1-201ENST00000438923 LSM11P83369 360 aaKnown RBP eCLIP12.7□□□□□ -0.38
AC005550.1-201ENST00000438923 EIF4G3O43432 1585 aaKnown RBP12.69□□□□□ -0.38
AC005550.1-201ENST00000438923 PBX2P40425 430 aa12.69□□□□□ -0.38
AC005550.1-201ENST00000438923 BIVM-ERCC5R4GMW8 1640 aa12.69□□□□□ -0.38
AC005550.1-201ENST00000438923 SYNJ1O43426 1573 aa12.69□□□□□ -0.38
AC005550.1-201ENST00000438923 LHX6Q9UPM6 363 aa12.68□□□□□ -0.38
AC005550.1-201ENST00000438923 SLC34A2O95436 690 aa12.67□□□□□ -0.38
AC005550.1-201ENST00000438923 PPP1R37O75864 691 aa12.65□□□□□ -0.38
AC005550.1-201ENST00000438923 CHMP7Q8WUX9 453 aaPredicted RBP12.64□□□□□ -0.39
AC005550.1-201ENST00000438923 AXIN2Q9Y2T1 843 aa12.62□□□□□ -0.39
AC005550.1-201ENST00000438923 PSDA5PKW4 1024 aaPredicted RBP12.61□□□□□ -0.39
AC005550.1-201ENST00000438923 GRIN2BQ13224 1484 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms