RNA–Protein interactions for RNA: ENST00000438097.6

UBE3A-204, Transcript of ubiquitin protein ligase E3A, humanhuman

APPRIS P3 TSL 5 BASIC

Gene UBE3A, Length 8,939 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3A-204ENST00000438097 PHF14O94880 888 aa17.66■□□□□ 0.42
UBE3A-204ENST00000438097 FRAT1Q92837 279 aaPredicted RBP17.65■□□□□ 0.42
UBE3A-204ENST00000438097 TMF1P82094 1093 aa17.65■□□□□ 0.42
UBE3A-204ENST00000438097 SPAG9O60271 1321 aaKnown RBP17.65■□□□□ 0.42
UBE3A-204ENST00000438097 U2SURPO15042 1029 aaKnown RBP17.65■□□□□ 0.42
UBE3A-204ENST00000438097 CEP164Q9UPV0 1460 aa17.65■□□□□ 0.42
UBE3A-204ENST00000438097 G3V3G9 751 aa17.64■□□□□ 0.41
UBE3A-204ENST00000438097 DCAF8Q5TAQ9 597 aa17.64■□□□□ 0.41
UBE3A-204ENST00000438097 EIF4G1Q04637 1599 aaKnown RBP17.63■□□□□ 0.41
UBE3A-204ENST00000438097 KIF3AQ9Y496 699 aa17.63■□□□□ 0.41
UBE3A-204ENST00000438097 CHMP4CQ96CF2 233 aa17.62■□□□□ 0.41
UBE3A-204ENST00000438097 ANO8Q9HCE9 1232 aaPredicted RBP17.62■□□□□ 0.41
UBE3A-204ENST00000438097 IRX6P78412 446 aaPredicted RBP17.61■□□□□ 0.41
UBE3A-204ENST00000438097 NEUROD2Q15784 382 aa17.6■□□□□ 0.41
UBE3A-204ENST00000438097 NOP58Q9Y2X3 529 aaKnown RBP17.6■□□□□ 0.41
UBE3A-204ENST00000438097 SETQ01105 290 aaPredicted RBP17.59■□□□□ 0.41
UBE3A-204ENST00000438097 SENP3Q9H4L4 574 aaPredicted RBP17.59■□□□□ 0.41
UBE3A-204ENST00000438097 CCNB3Q8WWL7 1395 aa17.59■□□□□ 0.41
UBE3A-204ENST00000438097 GORABQ5T7V8 394 aa17.58■□□□□ 0.4
UBE3A-204ENST00000438097 CEP162Q5TB80 1403 aa17.58■□□□□ 0.4
UBE3A-204ENST00000438097 SRPK2P78362 688 aaKnown RBP17.58■□□□□ 0.4
UBE3A-204ENST00000438097 RGS3P49796 1198 aa17.58■□□□□ 0.4
UBE3A-204ENST00000438097 PPP4R2Q9NY27 417 aa17.58■□□□□ 0.4
UBE3A-204ENST00000438097 HDGFL2Q7Z4V5 671 aaPredicted RBP17.57■□□□□ 0.4
UBE3A-204ENST00000438097 RASSF8Q8NHQ8 419 aa17.56■□□□□ 0.4
UBE3A-204ENST00000438097 TPM3P06753 285 aa17.55■□□□□ 0.4
UBE3A-204ENST00000438097 TAF7LQ5H9L4 462 aa17.55■□□□□ 0.4
UBE3A-204ENST00000438097 TSR1Q2NL82 804 aaKnown RBP17.54■□□□□ 0.4
UBE3A-204ENST00000438097 TCEAL9Q9UHQ7 104 aa17.54■□□□□ 0.4
UBE3A-204ENST00000438097 TNNT3P45378 269 aaPredicted RBP17.54■□□□□ 0.4
UBE3A-204ENST00000438097 CCDC70Q6NSX1 233 aa17.54■□□□□ 0.4
UBE3A-204ENST00000438097 TPM2P07951 284 aa17.53■□□□□ 0.4
UBE3A-204ENST00000438097 HMMRO75330 724 aa17.51■□□□□ 0.39
UBE3A-204ENST00000438097 KTN1Q86UP2 1357 aaKnown RBP17.51■□□□□ 0.39
UBE3A-204ENST00000438097 LRRFIP1Q32MZ4 808 aaKnown RBP17.51■□□□□ 0.39
UBE3A-204ENST00000438097 MORC1Q86VD1 984 aa17.51■□□□□ 0.39
UBE3A-204ENST00000438097 TRHP20396 242 aaPredicted RBP17.5■□□□□ 0.39
UBE3A-204ENST00000438097 ARHGAP35Q9NRY4 1499 aa17.5■□□□□ 0.39
UBE3A-204ENST00000438097 HSP90B1P14625 803 aaKnown RBP17.49■□□□□ 0.39
UBE3A-204ENST00000438097 STK31Q9BXU1 1019 aa17.48■□□□□ 0.39
UBE3A-204ENST00000438097 PRDM2Q13029 1718 aa17.48■□□□□ 0.39
UBE3A-204ENST00000438097 TPM1P09493 284 aa17.47■□□□□ 0.39
UBE3A-204ENST00000438097 CSB-PGBD3P0DP91 1061 aa17.47■□□□□ 0.39
UBE3A-204ENST00000438097 CC2D1BQ5T0F9 858 aaKnown RBP17.46■□□□□ 0.39
UBE3A-204ENST00000438097 AMOTL1Q8IY63 956 aa17.46■□□□□ 0.39
UBE3A-204ENST00000438097 BAZ1AQ9NRL2 1556 aaPredicted RBP17.46■□□□□ 0.39
UBE3A-204ENST00000438097 WRNQ14191 1432 aaPredicted RBP eCLIP17.46■□□□□ 0.395e-6■■■■■ 29.2
UBE3A-204ENST00000438097 VPS53Q5VIR6 699 aa17.46■□□□□ 0.39
UBE3A-204ENST00000438097 CARMIL2Q6F5E8 1435 aa17.45■□□□□ 0.38
UBE3A-204ENST00000438097 SUPT16HQ9Y5B9 1047 aaKnown RBP17.45■□□□□ 0.38
UBE3A-204ENST00000438097 LMOD3Q0VAK6 560 aa17.45■□□□□ 0.38
UBE3A-204ENST00000438097 MARCH6O60337 910 aa17.44■□□□□ 0.38
UBE3A-204ENST00000438097 PAK3O75914 559 aaPredicted RBP17.44■□□□□ 0.38
UBE3A-204ENST00000438097 CHMP3Q9Y3E7 222 aa17.44■□□□□ 0.38
UBE3A-204ENST00000438097 RWDD1Q9H446 243 aaPredicted RBP17.43■□□□□ 0.38
UBE3A-204ENST00000438097 KIF16BQ96L93 1317 aa17.43■□□□□ 0.38
UBE3A-204ENST00000438097 TRIM34Q9BYJ4 488 aa17.42■□□□□ 0.38
UBE3A-204ENST00000438097 GPS2Q13227 327 aa17.42■□□□□ 0.38
UBE3A-204ENST00000438097 CNKSR2Q8WXI2 1034 aa17.41■□□□□ 0.38
UBE3A-204ENST00000438097 PMFBP1Q8TBY8 1022 aa17.41■□□□□ 0.38
UBE3A-204ENST00000438097 PHLDB1Q86UU1 1377 aa17.41■□□□□ 0.38
UBE3A-204ENST00000438097 TPD52L1Q16890 204 aaPredicted RBP17.4■□□□□ 0.38
UBE3A-204ENST00000438097 MIER1Q8N108 512 aa17.4■□□□□ 0.38
UBE3A-204ENST00000438097 NOL10Q9BSC4 688 aaKnown RBP17.4■□□□□ 0.38
UBE3A-204ENST00000438097 EID1Q9Y6B2 187 aa17.39■□□□□ 0.38
UBE3A-204ENST00000438097 FRAT2O75474 233 aaPredicted RBP17.39■□□□□ 0.37
UBE3A-204ENST00000438097 TCERG1O14776 1098 aaKnown RBP17.39■□□□□ 0.37
UBE3A-204ENST00000438097 ATP6V1DQ9Y5K8 247 aa17.39■□□□□ 0.37
UBE3A-204ENST00000438097 ZNF330Q9Y3S2 320 aaPredicted RBP17.38■□□□□ 0.37
UBE3A-204ENST00000438097 ROCK2O75116 1388 aaKnown RBP17.38■□□□□ 0.37
UBE3A-204ENST00000438097 HIRIP3Q9BW71 556 aaPredicted RBP17.38■□□□□ 0.37
UBE3A-204ENST00000438097 ST18O60284 1047 aa17.38■□□□□ 0.37
UBE3A-204ENST00000438097 AKAP17AQ02040 695 aaKnown RBP17.37■□□□□ 0.37
UBE3A-204ENST00000438097 HOOK1Q9UJC3 728 aaKnown RBP17.37■□□□□ 0.37
UBE3A-204ENST00000438097 TERF2IPQ9NYB0 399 aa17.37■□□□□ 0.37
UBE3A-204ENST00000438097 CTDP1Q9Y5B0 961 aaPredicted RBP17.37■□□□□ 0.37
UBE3A-204ENST00000438097 TRIM6-TRIM34B2RNG4 842 aa17.37■□□□□ 0.37
UBE3A-204ENST00000438097 GTF2E1P29083 439 aaPredicted RBP17.37■□□□□ 0.37
UBE3A-204ENST00000438097 DCAF11Q8TEB1 546 aa17.36■□□□□ 0.37
UBE3A-204ENST00000438097 CCDC9Q9Y3X0 531 aaKnown RBP17.36■□□□□ 0.37
UBE3A-204ENST00000438097 ITPRIPQ8IWB1 547 aa17.35■□□□□ 0.37
UBE3A-204ENST00000438097 SOX12O15370 315 aa17.35■□□□□ 0.37
UBE3A-204ENST00000438097 UACAQ9BZF9 1416 aa17.35■□□□□ 0.37
UBE3A-204ENST00000438097 ANKRD20A12PQ8NF67 263 aa17.35■□□□□ 0.37
UBE3A-204ENST00000438097 SMARCA2P51531 1590 aa17.34■□□□□ 0.37
UBE3A-204ENST00000438097 IPO7O95373 1038 aaKnown RBP17.33■□□□□ 0.37
UBE3A-204ENST00000438097 TIMELESSQ9UNS1 1208 aa17.33■□□□□ 0.37
UBE3A-204ENST00000438097 RDXP35241 583 aaKnown RBP17.33■□□□□ 0.36
UBE3A-204ENST00000438097 RALBP1Q15311 655 aa17.32■□□□□ 0.36
UBE3A-204ENST00000438097 CALRP27797 417 aaKnown RBP17.32■□□□□ 0.36
UBE3A-204ENST00000438097 WASHC2AQ641Q2 1341 aa17.32■□□□□ 0.36
UBE3A-204ENST00000438097 SF3A1Q15459 793 aaKnown RBP17.31■□□□□ 0.36
UBE3A-204ENST00000438097 DCAF8L1A6NGE4 600 aa17.31■□□□□ 0.36
UBE3A-204ENST00000438097 RRP12Q5JTH9 1297 aaKnown RBP17.31■□□□□ 0.36
UBE3A-204ENST00000438097 CREBRFQ8IUR6 639 aa17.31■□□□□ 0.36
UBE3A-204ENST00000438097 CCDC47Q96A33 483 aaKnown RBP17.3■□□□□ 0.36
UBE3A-204ENST00000438097 H3BQV1 296 aa17.3■□□□□ 0.36
UBE3A-204ENST00000438097 IFFO2Q5TF58 517 aa17.3■□□□□ 0.36
UBE3A-204ENST00000438097 PES1O00541 588 aaKnown RBP17.3■□□□□ 0.36
UBE3A-204ENST00000438097 GOLGA6L19H0YKK7 550 aa17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms