RNA–Protein interactions for RNA: ENST00000431429.1

HMGB1P27-201, Transcript of high mobility group box 1 pseudogene 27, humanhuman

BASIC

Gene HMGB1P27, Length 603 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P27-201ENST00000431429 MICALL2Q8IY33 904 aa6.88□□□□□ -1.31
HMGB1P27-201ENST00000431429 ZC3H15Q8WU90 426 aaKnown RBP6.88□□□□□ -1.31
HMGB1P27-201ENST00000431429 KIF3CO14782 793 aa6.87□□□□□ -1.31
HMGB1P27-201ENST00000431429 FOXK1P85037 733 aa6.85□□□□□ -1.31
HMGB1P27-201ENST00000431429 DSG2Q14126 1118 aa6.85□□□□□ -1.31
HMGB1P27-201ENST00000431429 EMILIN3Q9NT22 766 aa6.85□□□□□ -1.31
HMGB1P27-201ENST00000431429 HAX1O00165 279 aa6.84□□□□□ -1.31
HMGB1P27-201ENST00000431429 TULP1O00294 542 aaPredicted RBP6.84□□□□□ -1.31
HMGB1P27-201ENST00000431429 ZMYND10O75800 440 aa6.84□□□□□ -1.31
HMGB1P27-201ENST00000431429 PDIA6Q15084 440 aa6.83□□□□□ -1.32
HMGB1P27-201ENST00000431429 OCEL1Q9H607 264 aa6.83□□□□□ -1.32
HMGB1P27-201ENST00000431429 TMEM132AQ24JP5 1023 aa6.82□□□□□ -1.32
HMGB1P27-201ENST00000431429 MLLT3P42568 568 aaPredicted RBP6.81□□□□□ -1.32
HMGB1P27-201ENST00000431429 SMYD5Q6GMV2 418 aa6.81□□□□□ -1.32
HMGB1P27-201ENST00000431429 BOLA1Q9Y3E2 137 aa6.81□□□□□ -1.32
HMGB1P27-201ENST00000431429 SPDYE16A6NNV3 312 aaPredicted RBP6.8□□□□□ -1.32
HMGB1P27-201ENST00000431429 BRPF1P55201 1214 aaPredicted RBP6.8□□□□□ -1.32
HMGB1P27-201ENST00000431429 C2orf72A6NCS6 295 aa6.79□□□□□ -1.32
HMGB1P27-201ENST00000431429 GABBR2O75899 941 aa6.79□□□□□ -1.32
HMGB1P27-201ENST00000431429 TMEM92Q6UXU6 159 aa6.79□□□□□ -1.32
HMGB1P27-201ENST00000431429 BARGINQ6ZT62 677 aa6.79□□□□□ -1.32
HMGB1P27-201ENST00000431429 DPYSL4O14531 572 aa6.78□□□□□ -1.32
HMGB1P27-201ENST00000431429 PELP1Q8IZL8 1130 aaKnown RBP6.78□□□□□ -1.32
HMGB1P27-201ENST00000431429 POTEFA5A3E0 1075 aa6.77□□□□□ -1.33
HMGB1P27-201ENST00000431429 GPR37O15354 613 aa6.77□□□□□ -1.33
HMGB1P27-201ENST00000431429 PLPP6Q8IY26 295 aa6.77□□□□□ -1.33
HMGB1P27-201ENST00000431429 TMC2Q8TDI7 906 aa6.77□□□□□ -1.33
HMGB1P27-201ENST00000431429 SLC24A3Q9HC58 644 aa6.77□□□□□ -1.33
HMGB1P27-201ENST00000431429 RBM26Q5T8P6 1007 aaKnown RBP6.76□□□□□ -1.33
HMGB1P27-201ENST00000431429 COLQQ9Y215 455 aaPredicted RBP6.76□□□□□ -1.33
HMGB1P27-201ENST00000431429 PLCG2P16885 1265 aa6.74□□□□□ -1.33
HMGB1P27-201ENST00000431429 OXER1Q8TDS5 423 aa6.74□□□□□ -1.33
HMGB1P27-201ENST00000431429 L3MBTL3Q96JM7 780 aaPredicted RBP6.74□□□□□ -1.33
HMGB1P27-201ENST00000431429 PTGER2P43116 358 aa6.73□□□□□ -1.33
HMGB1P27-201ENST00000431429 GTF3C3Q9Y5Q9 886 aa6.73□□□□□ -1.33
HMGB1P27-201ENST00000431429 GPIHBP1Q8IV16 184 aa6.72□□□□□ -1.33
HMGB1P27-201ENST00000431429 POTEIP0CG38 1075 aa6.71□□□□□ -1.34
HMGB1P27-201ENST00000431429 SLC39A7Q92504 469 aa6.71□□□□□ -1.34
HMGB1P27-201ENST00000431429 C7P10643 843 aa6.69□□□□□ -1.34
HMGB1P27-201ENST00000431429 OSBPP22059 807 aa6.69□□□□□ -1.34
HMGB1P27-201ENST00000431429 AK7Q96M32 723 aa6.69□□□□□ -1.34
HMGB1P27-201ENST00000431429 TIMELESSQ9UNS1 1208 aa6.69□□□□□ -1.34
HMGB1P27-201ENST00000431429 SLC34A2O95436 690 aa6.68□□□□□ -1.34
HMGB1P27-201ENST00000431429 PTCD2Q8WV60 388 aaKnown RBP6.68□□□□□ -1.34
HMGB1P27-201ENST00000431429 G3V3G9 751 aa6.67□□□□□ -1.34
HMGB1P27-201ENST00000431429 NEUROD2Q15784 382 aa6.67□□□□□ -1.34
HMGB1P27-201ENST00000431429 MAP3K9P80192 1104 aa6.66□□□□□ -1.34
HMGB1P27-201ENST00000431429 POTEHQ6S545 545 aa6.66□□□□□ -1.34
HMGB1P27-201ENST00000431429 DCBLD2Q96PD2 775 aa6.66□□□□□ -1.34
HMGB1P27-201ENST00000431429 ANO8Q9HCE9 1232 aaPredicted RBP6.66□□□□□ -1.34
HMGB1P27-201ENST00000431429 METRNQ9UJH8 293 aa6.66□□□□□ -1.34
HMGB1P27-201ENST00000431429 TRIM66O15016 1216 aa6.65□□□□□ -1.34
HMGB1P27-201ENST00000431429 SEC24BO95487 1268 aa6.65□□□□□ -1.34
HMGB1P27-201ENST00000431429 PRIM1P49642 420 aaKnown RBP6.65□□□□□ -1.34
HMGB1P27-201ENST00000431429 UPF1Q92900 1129 aaKnown RBP eCLIP6.64□□□□□ -1.35
HMGB1P27-201ENST00000431429 MINK1Q8N4C8 1332 aaPredicted RBP6.62□□□□□ -1.35
HMGB1P27-201ENST00000431429 KDM4FA0A1W2PPD8 638 aa6.62□□□□□ -1.35
HMGB1P27-201ENST00000431429 GRXCR2A6NFK2 248 aa6.62□□□□□ -1.35
HMGB1P27-201ENST00000431429 EVI5O60447 810 aa6.62□□□□□ -1.35
HMGB1P27-201ENST00000431429 MAP2K5Q13163 448 aa6.62□□□□□ -1.35
HMGB1P27-201ENST00000431429 PDE4DQ08499 809 aa6.61□□□□□ -1.35
HMGB1P27-201ENST00000431429 ERICH6Q7L0X2 663 aa6.61□□□□□ -1.35
HMGB1P27-201ENST00000431429 GPBP1L1Q9HC44 474 aaPredicted RBP6.61□□□□□ -1.35
HMGB1P27-201ENST00000431429 GNPATO15228 680 aa6.6□□□□□ -1.35
HMGB1P27-201ENST00000431429 TBC1D12O60347 775 aa6.6□□□□□ -1.35
HMGB1P27-201ENST00000431429 HIC1Q14526 733 aa6.6□□□□□ -1.35
HMGB1P27-201ENST00000431429 AMHR2Q16671 573 aa6.6□□□□□ -1.35
HMGB1P27-201ENST00000431429 KDM4CQ9H3R0 1056 aa6.6□□□□□ -1.35
HMGB1P27-201ENST00000431429 IRF6O14896 467 aa6.59□□□□□ -1.35
HMGB1P27-201ENST00000431429 PTGDRQ13258 359 aa6.59□□□□□ -1.35
HMGB1P27-201ENST00000431429 C3orf67Q6ZVT6 689 aa6.59□□□□□ -1.35
HMGB1P27-201ENST00000431429 KRI1Q8N9T8 703 aaKnown RBP6.59□□□□□ -1.35
HMGB1P27-201ENST00000431429 SP7Q8TDD2 431 aaPredicted RBP6.59□□□□□ -1.35
HMGB1P27-201ENST00000431429 DDX12PQ92771 950 aa6.59□□□□□ -1.35
HMGB1P27-201ENST00000431429 CCDC102AQ96A19 550 aa6.59□□□□□ -1.35
HMGB1P27-201ENST00000431429 FCHSD2O94868 740 aa6.58□□□□□ -1.36
HMGB1P27-201ENST00000431429 FECHP22830 423 aa6.58□□□□□ -1.36
HMGB1P27-201ENST00000431429 NPDC1Q9NQX5 325 aaPredicted RBP6.58□□□□□ -1.36
HMGB1P27-201ENST00000431429 PHF14O94880 888 aa6.57□□□□□ -1.36
HMGB1P27-201ENST00000431429 EN1Q05925 392 aaPredicted RBP6.57□□□□□ -1.36
HMGB1P27-201ENST00000431429 NUTM2FA1L443 756 aa6.56□□□□□ -1.36
HMGB1P27-201ENST00000431429 EPAS1Q99814 870 aa6.56□□□□□ -1.36
HMGB1P27-201ENST00000431429 DAXXQ9UER7 740 aaPredicted RBP6.56□□□□□ -1.36
HMGB1P27-201ENST00000431429 POTEJP0CG39 1038 aa6.55□□□□□ -1.36
HMGB1P27-201ENST00000431429 PCDHGA4Q9Y5G9 962 aa6.55□□□□□ -1.36
HMGB1P27-201ENST00000431429 PARP9Q8IXQ6 854 aa6.54□□□□□ -1.36
HMGB1P27-201ENST00000431429 TMUB1Q9BVT8 246 aa6.54□□□□□ -1.36
HMGB1P27-201ENST00000431429 EIF2AK3Q9NZJ5 1116 aaKnown RBP6.54□□□□□ -1.36
HMGB1P27-201ENST00000431429 PCDHGA10Q9Y5H3 936 aa6.54□□□□□ -1.36
HMGB1P27-201ENST00000431429 PLEKHG3A1L390 1219 aa6.53□□□□□ -1.36
HMGB1P27-201ENST00000431429 JPH4Q96JJ6 628 aa6.53□□□□□ -1.36
HMGB1P27-201ENST00000431429 CDHR5Q9HBB8 845 aa6.53□□□□□ -1.36
HMGB1P27-201ENST00000431429 ZNF316A6NFI3 1004 aaPredicted RBP6.52□□□□□ -1.37
HMGB1P27-201ENST00000431429 FAM117AQ9C073 453 aa6.52□□□□□ -1.37
HMGB1P27-201ENST00000431429 HOXB3P14651 431 aaPredicted RBP6.51□□□□□ -1.37
HMGB1P27-201ENST00000431429 FOSBP53539 338 aa6.51□□□□□ -1.37
HMGB1P27-201ENST00000431429 SLAIN1Q8ND83 568 aa6.51□□□□□ -1.37
HMGB1P27-201ENST00000431429 TYW1BQ6NUM6 668 aa6.5□□□□□ -1.37
HMGB1P27-201ENST00000431429 TTC13Q8NBP0 860 aa6.5□□□□□ -1.37
HMGB1P27-201ENST00000431429 IL27Q8NEV9 243 aa6.5□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms