RNA–Protein interactions for RNA: ENST00000429374.5

HDAC10-204, Transcript of histone deacetylase 10, humanhuman

TSL 1 (best)

Gene HDAC10, Length 1,634 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC10-204ENST00000429374 CAMSAP2Q08AD1 1489 aa27.94■■■□□ 2.06
HDAC10-204ENST00000429374 ABCC5O15440 1437 aa27.93■■■□□ 2.06
HDAC10-204ENST00000429374 ZCCHC11Q5TAX3 1644 aaKnown RBP27.92■■■□□ 2.06
HDAC10-204ENST00000429374 MAPKBP1O60336 1514 aa27.89■■■□□ 2.06
HDAC10-204ENST00000429374 PREX2Q70Z35 1606 aa27.87■■■□□ 2.05
HDAC10-204ENST00000429374 ZNF644Q9H582 1327 aaPredicted RBP27.86■■■□□ 2.05
HDAC10-204ENST00000429374 CROCC2H7BZ55 1655 aa27.85■■■□□ 2.05
HDAC10-204ENST00000429374 ADGBQ8N7X0 1667 aa27.83■■■□□ 2.05
HDAC10-204ENST00000429374 ADGRL2O95490 1459 aa27.83■■■□□ 2.05
HDAC10-204ENST00000429374 CDC42BPBQ9Y5S2 1711 aa27.83■■■□□ 2.04
HDAC10-204ENST00000429374 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP27.81■■■□□ 2.04
HDAC10-204ENST00000429374 ARHGEF5Q12774 1597 aa27.81■■■□□ 2.04
HDAC10-204ENST00000429374 SHANK2Q9UPX8 1470 aa27.81■■■□□ 2.04
HDAC10-204ENST00000429374 CHIC2Q9UKJ5 165 aa27.79■■■□□ 2.04
HDAC10-204ENST00000429374 MYO5CQ9NQX4 1742 aa27.78■■■□□ 2.04
HDAC10-204ENST00000429374 RSPH4AQ5TD94 716 aa27.78■■■□□ 2.04
HDAC10-204ENST00000429374 RRP7BPQ9NSQ0 103 aa27.78■■■□□ 2.04
HDAC10-204ENST00000429374 TTC37Q6PGP7 1564 aa27.76■■■□□ 2.03
HDAC10-204ENST00000429374 TIMELESSQ9UNS1 1208 aa27.76■■■□□ 2.03
HDAC10-204ENST00000429374 NCOA1Q15788 1441 aa27.74■■■□□ 2.03
HDAC10-204ENST00000429374 ZNF777Q9ULD5 760 aaPredicted RBP27.74■■■□□ 2.03
HDAC10-204ENST00000429374 PLEKHH2Q8IVE3 1493 aa27.72■■■□□ 2.03
HDAC10-204ENST00000429374 SAMD9LQ8IVG5 1584 aa27.72■■■□□ 2.03
HDAC10-204ENST00000429374 MBD5Q9P267 1494 aa27.71■■■□□ 2.03
HDAC10-204ENST00000429374 DNAJC5Q9H3Z4 198 aa27.7■■■□□ 2.03
HDAC10-204ENST00000429374 ARAP3Q8WWN8 1544 aa27.7■■■□□ 2.03
HDAC10-204ENST00000429374 ANKRD30AQ9BXX3 1397 aa27.7■■■□□ 2.02
HDAC10-204ENST00000429374 PLCH2O75038 1416 aa27.69■■■□□ 2.02
HDAC10-204ENST00000429374 KIAA1107Q9UPP5 1409 aa27.69■■■□□ 2.02
HDAC10-204ENST00000429374 KDM6BO15054 1643 aa27.68■■■□□ 2.02
HDAC10-204ENST00000429374 WDR7Q9Y4E6 1490 aa27.67■■■□□ 2.02
HDAC10-204ENST00000429374 ARHGAP5Q13017 1502 aa27.67■■■□□ 2.02
HDAC10-204ENST00000429374 CCDC141Q6ZP82 1450 aa27.65■■■□□ 2.02
HDAC10-204ENST00000429374 TSPY4P0CV99 314 aa27.64■■■□□ 2.02
HDAC10-204ENST00000429374 TSPY10P0CW01 314 aa27.64■■■□□ 2.02
HDAC10-204ENST00000429374 C9orf84Q5VXU9 1444 aa27.63■■■□□ 2.01
HDAC10-204ENST00000429374 MAST1Q9Y2H9 1570 aa27.62■■■□□ 2.01
HDAC10-204ENST00000429374 KCNH8Q96L42 1107 aa27.6■■■□□ 2.01
HDAC10-204ENST00000429374 ZNF316A6NFI3 1004 aaPredicted RBP27.59■■■□□ 2.01
HDAC10-204ENST00000429374 ABCA9Q8IUA7 1624 aa27.59■■■□□ 2.01
HDAC10-204ENST00000429374 EFCAB2Q5VUJ9 269 aa27.58■■■□□ 2.01
HDAC10-204ENST00000429374 HNRNPMP52272 730 aaKnown RBP eCLIP27.56■■■□□ 2
HDAC10-204ENST00000429374 TRIM52Q96A61 297 aa27.56■■■□□ 2
HDAC10-204ENST00000429374 SYCP2Q9BX26 1530 aa27.55■■■□□ 2
HDAC10-204ENST00000429374 NPM1P06748 294 aaKnown RBP eCLIP27.55■■■□□ 2
HDAC10-204ENST00000429374 ASXL2Q76L83 1435 aa27.54■■■□□ 2
HDAC10-204ENST00000429374 MPHOSPH9Q99550 1183 aa27.54■■■□□ 2
HDAC10-204ENST00000429374 DENND4BO75064 1496 aaPredicted RBP27.54■■■□□ 2
HDAC10-204ENST00000429374 ANKRD50Q9ULJ7 1429 aa27.53■■■□□ 2
HDAC10-204ENST00000429374 SIN3AQ96ST3 1273 aa27.52■■■□□ 2
HDAC10-204ENST00000429374 ABCC1P33527 1531 aa27.5■■□□□ 1.99
HDAC10-204ENST00000429374 PLXNC1O60486 1568 aa27.48■■□□□ 1.99
HDAC10-204ENST00000429374 KIF15Q9NS87 1388 aa27.47■■□□□ 1.99
HDAC10-204ENST00000429374 NEUROD1Q13562 356 aa27.45■■□□□ 1.99
HDAC10-204ENST00000429374 KDM5DQ9BY66 1539 aa27.45■■□□□ 1.98
HDAC10-204ENST00000429374 ARHGEF12Q9NZN5 1544 aa27.44■■□□□ 1.98
HDAC10-204ENST00000429374 PZPP20742 1482 aa27.43■■□□□ 1.98
HDAC10-204ENST00000429374 TONSLQ96HA7 1378 aa27.4■■□□□ 1.98
HDAC10-204ENST00000429374 PPP1R15AO75807 674 aaPredicted RBP27.4■■□□□ 1.98
HDAC10-204ENST00000429374 RTEL1-TNFRSF6BF6WH68 1400 aa27.39■■□□□ 1.98
HDAC10-204ENST00000429374 ANKRD30BQ9BXX2 1392 aa27.39■■□□□ 1.97
HDAC10-204ENST00000429374 SLC4A1APQ9BWU0 796 aaKnown RBP27.38■■□□□ 1.97
HDAC10-204ENST00000429374 FANCAO15360 1455 aa27.38■■□□□ 1.97
HDAC10-204ENST00000429374 DUOX2Q9NRD8 1548 aa27.35■■□□□ 1.97
HDAC10-204ENST00000429374 DIEXFQ68CQ4 756 aaKnown RBP27.34■■□□□ 1.97
HDAC10-204ENST00000429374 CFAP74Q9C0B2 1584 aa27.34■■□□□ 1.97
HDAC10-204ENST00000429374 RIMBP3CA6NJZ7 1639 aa27.33■■□□□ 1.97
HDAC10-204ENST00000429374 RIMBP3BA6NNM3 1639 aa27.33■■□□□ 1.97
HDAC10-204ENST00000429374 RIMBP3Q9UFD9 1639 aa27.33■■□□□ 1.97
HDAC10-204ENST00000429374 TRAPPC8Q9Y2L5 1435 aa27.32■■□□□ 1.96
HDAC10-204ENST00000429374 ERBINQ96RT1 1412 aa27.31■■□□□ 1.96
HDAC10-204ENST00000429374 RPRD2Q5VT52 1461 aaKnown RBP27.31■■□□□ 1.96
HDAC10-204ENST00000429374 UNC13BO14795 1591 aa27.3■■□□□ 1.96
HDAC10-204ENST00000429374 NUP155O75694 1391 aa27.29■■□□□ 1.96
HDAC10-204ENST00000429374 ADGRL1O94910 1474 aa27.26■■□□□ 1.95
HDAC10-204ENST00000429374 CD109Q6YHK3 1445 aa27.25■■□□□ 1.95
HDAC10-204ENST00000429374 SPAG9O60271 1321 aaKnown RBP27.25■■□□□ 1.95
HDAC10-204ENST00000429374 ZFYVE16Q7Z3T8 1539 aa27.24■■□□□ 1.95
HDAC10-204ENST00000429374 INO80Q9ULG1 1556 aaPredicted RBP27.23■■□□□ 1.95
HDAC10-204ENST00000429374 SCAPERQ9BY12 1400 aa27.22■■□□□ 1.95
HDAC10-204ENST00000429374 MAGI2Q86UL8 1455 aa27.22■■□□□ 1.95
HDAC10-204ENST00000429374 PKD2Q13563 968 aa27.21■■□□□ 1.95
HDAC10-204ENST00000429374 GLI2P10070 1586 aa27.2■■□□□ 1.94
HDAC10-204ENST00000429374 FAM135AQ9P2D6 1515 aa27.2■■□□□ 1.94
HDAC10-204ENST00000429374 IQGAP3Q86VI3 1631 aa27.19■■□□□ 1.94
HDAC10-204ENST00000429374 FOXD1Q16676 465 aa27.19■■□□□ 1.94
HDAC10-204ENST00000429374 ATP7AQ04656 1500 aa27.18■■□□□ 1.94
HDAC10-204ENST00000429374 CYB5RLQ6IPT4 315 aa27.18■■□□□ 1.94
HDAC10-204ENST00000429374 AFAP1Q8N556 730 aa27.17■■□□□ 1.94
HDAC10-204ENST00000429374 NEO1Q92859 1461 aa27.17■■□□□ 1.94
HDAC10-204ENST00000429374 ZNF518AQ6AHZ1 1483 aa27.16■■□□□ 1.94
HDAC10-204ENST00000429374 TEX14Q8IWB6 1497 aa27.14■■□□□ 1.93
HDAC10-204ENST00000429374 MAP3K4Q9Y6R4 1608 aa27.13■■□□□ 1.93
HDAC10-204ENST00000429374 EIF2AK4Q9P2K8 1649 aaKnown RBP27.11■■□□□ 1.93
HDAC10-204ENST00000429374 KDM5CP41229 1560 aa27.11■■□□□ 1.93
HDAC10-204ENST00000429374 L3MBTL2Q969R5 705 aa27.1■■□□□ 1.93
HDAC10-204ENST00000429374 DEPDC5O75140 1603 aa27.09■■□□□ 1.93
HDAC10-204ENST00000429374 POGZQ7Z3K3 1410 aa27.07■■□□□ 1.92
HDAC10-204ENST00000429374 KIDINS220Q9ULH0 1771 aa27.07■■□□□ 1.92
HDAC10-204ENST00000429374 DHX29Q7Z478 1369 aaKnown RBP27.07■■□□□ 1.92
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms