RNA–Protein interactions for RNA: ENST00000426509.1

LINC00407-201, long intergenic non-protein coding RNA 407, humanhuman

TSL 5 BASIC

Gene LINC00407, Length 295 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00407-201ENST00000426509 MKRN3Q13064 507 aaKnown RBP4.57□□□□□ -1.68
LINC00407-201ENST00000426509 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP4.57□□□□□ -1.68
LINC00407-201ENST00000426509 KIF21AQ7Z4S6 1674 aa4.57□□□□□ -1.68
LINC00407-201ENST00000426509 FAM163AQ96GL9 167 aaPredicted RBP4.55□□□□□ -1.68
LINC00407-201ENST00000426509 BCL11BQ9C0K0 894 aaPredicted RBP4.55□□□□□ -1.68
LINC00407-201ENST00000426509 MROH2BQ7Z745 1585 aa4.55□□□□□ -1.68
LINC00407-201ENST00000426509 ARAP1Q96P48 1450 aa4.55□□□□□ -1.68
LINC00407-201ENST00000426509 MRC2Q9UBG0 1479 aa4.55□□□□□ -1.68
LINC00407-201ENST00000426509 PDS5BQ9NTI5 1447 aa4.55□□□□□ -1.68
LINC00407-201ENST00000426509 GOLGA2Q08379 1002 aa4.54□□□□□ -1.68
LINC00407-201ENST00000426509 MS4A4AQ96JQ5 239 aa4.54□□□□□ -1.68
LINC00407-201ENST00000426509 WDR62O43379 1518 aa4.54□□□□□ -1.68
LINC00407-201ENST00000426509 LAMC3Q9Y6N6 1575 aa4.53□□□□□ -1.68
LINC00407-201ENST00000426509 HMGXB3Q12766 1538 aa4.53□□□□□ -1.68
LINC00407-201ENST00000426509 SOX12O15370 315 aa4.53□□□□□ -1.68
LINC00407-201ENST00000426509 LCE2DQ5TA82 110 aaPredicted RBP4.53□□□□□ -1.68
LINC00407-201ENST00000426509 PHF8Q9UPP1 1060 aa4.53□□□□□ -1.68
LINC00407-201ENST00000426509 FBXO22Q8NEZ5 403 aa4.52□□□□□ -1.69
LINC00407-201ENST00000426509 STK24Q9Y6E0 443 aa4.52□□□□□ -1.69
LINC00407-201ENST00000426509 WIZO95785 1651 aa4.51□□□□□ -1.69
LINC00407-201ENST00000426509 STK25O00506 426 aa4.51□□□□□ -1.69
LINC00407-201ENST00000426509 L3MBTL3Q96JM7 780 aaPredicted RBP4.51□□□□□ -1.69
LINC00407-201ENST00000426509 TMEM121BQ9BXQ6 578 aaPredicted RBP4.51□□□□□ -1.69
LINC00407-201ENST00000426509 MFRPQ9BY79 579 aa4.51□□□□□ -1.69
LINC00407-201ENST00000426509 CADPSQ9ULU8 1353 aa4.51□□□□□ -1.69
LINC00407-201ENST00000426509 BAZ1BQ9UIG0 1483 aaKnown RBP4.5□□□□□ -1.69
LINC00407-201ENST00000426509 CDAN1Q8IWY9 1227 aa4.5□□□□□ -1.69
LINC00407-201ENST00000426509 SLAIN1Q8ND83 568 aa4.5□□□□□ -1.69
LINC00407-201ENST00000426509 TAOK2Q9UL54 1235 aa4.5□□□□□ -1.69
LINC00407-201ENST00000426509 BOLA1Q9Y3E2 137 aa4.49□□□□□ -1.69
LINC00407-201ENST00000426509 ZNF608Q9ULD9 1512 aaPredicted RBP4.49□□□□□ -1.69
LINC00407-201ENST00000426509 SMARCA4P51532 1647 aa4.48□□□□□ -1.69
LINC00407-201ENST00000426509 NLRP6P59044 892 aa4.48□□□□□ -1.69
LINC00407-201ENST00000426509 NKX1-1Q15270 411 aaPredicted RBP4.48□□□□□ -1.69
LINC00407-201ENST00000426509 TMEM92Q6UXU6 159 aa4.48□□□□□ -1.69
LINC00407-201ENST00000426509 HS6ST3Q8IZP7 471 aa4.48□□□□□ -1.69
LINC00407-201ENST00000426509 EIF2AK3Q9NZJ5 1116 aaKnown RBP4.48□□□□□ -1.69
LINC00407-201ENST00000426509 URB2Q14146 1524 aaKnown RBP4.47□□□□□ -1.69
LINC00407-201ENST00000426509 KDM4FA0A1W2PPD8 638 aa4.47□□□□□ -1.69
LINC00407-201ENST00000426509 LOC105371045A0A1W2PR82 267 aa4.47□□□□□ -1.69
LINC00407-201ENST00000426509 PPP1R37O75864 691 aa4.47□□□□□ -1.69
LINC00407-201ENST00000426509 MICALL2Q8IY33 904 aa4.47□□□□□ -1.69
LINC00407-201ENST00000426509 TOP2AP11388 1531 aaKnown RBP4.46□□□□□ -1.69
LINC00407-201ENST00000426509 CHGAP10645 457 aaKnown RBP4.46□□□□□ -1.7
LINC00407-201ENST00000426509 FANCD2Q9BXW9 1451 aa4.45□□□□□ -1.7
LINC00407-201ENST00000426509 CEP164Q9UPV0 1460 aa4.45□□□□□ -1.7
LINC00407-201ENST00000426509 C3orf67Q6ZVT6 689 aa4.45□□□□□ -1.7
LINC00407-201ENST00000426509 ST18O60284 1047 aa4.44□□□□□ -1.7
LINC00407-201ENST00000426509 HOXB3P14651 431 aaPredicted RBP4.43□□□□□ -1.7
LINC00407-201ENST00000426509 HRCP23327 699 aa4.42□□□□□ -1.7
LINC00407-201ENST00000426509 PEG3Q9GZU2 1588 aa4.42□□□□□ -1.7
LINC00407-201ENST00000426509 CCDC88BA6NC98 1476 aa4.42□□□□□ -1.7
LINC00407-201ENST00000426509 KIF3CO14782 793 aa4.41□□□□□ -1.7
LINC00407-201ENST00000426509 GTPBP6O43824 516 aaPredicted RBP4.41□□□□□ -1.7
LINC00407-201ENST00000426509 MMRN1Q13201 1228 aa4.41□□□□□ -1.7
LINC00407-201ENST00000426509 G3V3G9 751 aa4.4□□□□□ -1.71
LINC00407-201ENST00000426509 PCGF6Q9BYE7 350 aa4.4□□□□□ -1.71
LINC00407-201ENST00000426509 AQRO60306 1485 aaKnown RBP eCLIP4.4□□□□□ -1.71
LINC00407-201ENST00000426509 SNPHO15079 494 aa4.39□□□□□ -1.71
LINC00407-201ENST00000426509 SPNS2Q8IVW8 549 aa4.39□□□□□ -1.71
LINC00407-201ENST00000426509 ABCC8Q09428 1581 aa4.39□□□□□ -1.71
LINC00407-201ENST00000426509 CFTRP13569 1480 aa4.38□□□□□ -1.71
LINC00407-201ENST00000426509 POTEB3A0JP26 581 aa4.38□□□□□ -1.71
LINC00407-201ENST00000426509 C2orf72A6NCS6 295 aa4.38□□□□□ -1.71
LINC00407-201ENST00000426509 SLC24A1O60721 1099 aa4.38□□□□□ -1.71
LINC00407-201ENST00000426509 POTEBQ6S5H4 581 aa4.38□□□□□ -1.71
LINC00407-201ENST00000426509 ILDR2Q71H61 639 aa4.38□□□□□ -1.71
LINC00407-201ENST00000426509 FAM9AQ8IZU1 332 aaPredicted RBP4.38□□□□□ -1.71
LINC00407-201ENST00000426509 IFT140Q96RY7 1462 aa4.37□□□□□ -1.71
LINC00407-201ENST00000426509 PLCB2Q00722 1185 aa4.37□□□□□ -1.71
LINC00407-201ENST00000426509 MARVELD3Q96A59 401 aa4.37□□□□□ -1.71
LINC00407-201ENST00000426509 TRIM26Q12899 539 aaPredicted RBP4.36□□□□□ -1.71
LINC00407-201ENST00000426509 GPR153Q6NV75 609 aa4.36□□□□□ -1.71
LINC00407-201ENST00000426509 BBXQ8WY36 941 aaPredicted RBP4.36□□□□□ -1.71
LINC00407-201ENST00000426509 CLASP1Q7Z460 1538 aa4.36□□□□□ -1.71
LINC00407-201ENST00000426509 EIF4G3O43432 1585 aaKnown RBP4.36□□□□□ -1.71
LINC00407-201ENST00000426509 CHD1O14646 1710 aa4.35□□□□□ -1.71
LINC00407-201ENST00000426509 HOXB1P14653 301 aaPredicted RBP4.35□□□□□ -1.71
LINC00407-201ENST00000426509 DOK7Q18PE1 504 aa4.34□□□□□ -1.71
LINC00407-201ENST00000426509 PAXIP1Q6ZW49 1069 aaPredicted RBP4.34□□□□□ -1.71
LINC00407-201ENST00000426509 FBXO41Q8TF61 875 aa4.34□□□□□ -1.71
LINC00407-201ENST00000426509 GPHNQ9NQX3 736 aaPredicted RBP4.34□□□□□ -1.71
LINC00407-201ENST00000426509 GAPVD1Q14C86 1478 aa4.34□□□□□ -1.71
LINC00407-201ENST00000426509 ERCC6L2Q5T890 1561 aa4.33□□□□□ -1.72
LINC00407-201ENST00000426509 TOPBP1Q92547 1522 aa4.33□□□□□ -1.72
LINC00407-201ENST00000426509 SOGA1O94964 1423 aa4.33□□□□□ -1.72
LINC00407-201ENST00000426509 NCKAP5LQ9HCH0 1330 aa4.33□□□□□ -1.72
LINC00407-201ENST00000426509 ARSIQ5FYB1 569 aa4.33□□□□□ -1.72
LINC00407-201ENST00000426509 CADPS2Q86UW7 1296 aa4.33□□□□□ -1.72
LINC00407-201ENST00000426509 KHSRPQ92945 711 aaKnown RBP eCLIP4.33□□□□□ -1.72
LINC00407-201ENST00000426509 CFAP44Q96MT7 982 aa4.33□□□□□ -1.72
LINC00407-201ENST00000426509 CRISPLD2Q9H0B8 497 aa4.33□□□□□ -1.72
LINC00407-201ENST00000426509 ZBTB4Q9P1Z0 1013 aaPredicted RBP4.33□□□□□ -1.72
LINC00407-201ENST00000426509 SYNJ1O43426 1573 aa4.32□□□□□ -1.72
LINC00407-201ENST00000426509 RUSC2Q8N2Y8 1516 aa4.32□□□□□ -1.72
LINC00407-201ENST00000426509 EEA1Q15075 1411 aa4.32□□□□□ -1.72
LINC00407-201ENST00000426509 TDRD9Q8NDG6 1382 aaKnown RBP4.32□□□□□ -1.72
LINC00407-201ENST00000426509 SLC34A2O95436 690 aa4.32□□□□□ -1.72
LINC00407-201ENST00000426509 FOXK1P85037 733 aa4.32□□□□□ -1.72
LINC00407-201ENST00000426509 DSG2Q14126 1118 aa4.32□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms