RNA–Protein interactions for RNA: ENST00000426246.2

USP42-203, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 2

Gene USP42, Length 3,611 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-203ENST00000426246 NEFLP07196 543 aa19.03■□□□□ 0.64
USP42-203ENST00000426246 RAB3GAP2Q9H2M9 1393 aa19.03■□□□□ 0.64
USP42-203ENST00000426246 SETD5Q9C0A6 1442 aa19.01■□□□□ 0.63
USP42-203ENST00000426246 UACAQ9BZF9 1416 aa19■□□□□ 0.63
USP42-203ENST00000426246 ABCC2Q92887 1545 aa18.99■□□□□ 0.63
USP42-203ENST00000426246 ABCC10Q5T3U5 1492 aa18.98■□□□□ 0.63
USP42-203ENST00000426246 ITSN2Q9NZM3 1697 aa18.97■□□□□ 0.63
USP42-203ENST00000426246 CDC42BPAQ5VT25 1732 aa18.97■□□□□ 0.63
USP42-203ENST00000426246 GPATCH8Q9UKJ3 1502 aaKnown RBP18.96■□□□□ 0.63
USP42-203ENST00000426246 CDK11AQ9UQ88 783 aaPredicted RBP18.96■□□□□ 0.63
USP42-203ENST00000426246 HFM1A2PYH4 1435 aa18.96■□□□□ 0.63
USP42-203ENST00000426246 MAPKBP1O60336 1514 aa18.95■□□□□ 0.62
USP42-203ENST00000426246 DNMT1P26358 1616 aaKnown RBP18.93■□□□□ 0.62
USP42-203ENST00000426246 UHRF1BP1LA0JNW5 1464 aa18.93■□□□□ 0.62
USP42-203ENST00000426246 GCC2Q8IWJ2 1684 aa18.93■□□□□ 0.62
USP42-203ENST00000426246 CLSPNQ9HAW4 1339 aa18.93■□□□□ 0.62
USP42-203ENST00000426246 NAIPQ13075 1403 aa18.92■□□□□ 0.62
USP42-203ENST00000426246 ZCCHC11Q5TAX3 1644 aaKnown RBP18.9■□□□□ 0.62
USP42-203ENST00000426246 ZNF326Q5BKZ1 582 aaKnown RBP18.9■□□□□ 0.62
USP42-203ENST00000426246 ANP32CO43423 234 aa18.89■□□□□ 0.62
USP42-203ENST00000426246 RRP7BPQ9NSQ0 103 aa18.89■□□□□ 0.61
USP42-203ENST00000426246 AKNAQ7Z591 1439 aa18.89■□□□□ 0.61
USP42-203ENST00000426246 CAMSAP2Q08AD1 1489 aa18.88■□□□□ 0.61
USP42-203ENST00000426246 KDM5BQ9UGL1 1544 aa18.88■□□□□ 0.61
USP42-203ENST00000426246 ZNF644Q9H582 1327 aaPredicted RBP18.88■□□□□ 0.61
USP42-203ENST00000426246 CROCC2H7BZ55 1655 aa18.88■□□□□ 0.61
USP42-203ENST00000426246 DAPK1P53355 1430 aa18.87■□□□□ 0.61
USP42-203ENST00000426246 ABCC5O15440 1437 aa18.87■□□□□ 0.61
USP42-203ENST00000426246 KDM6BO15054 1643 aa18.87■□□□□ 0.61
USP42-203ENST00000426246 CDC42BPBQ9Y5S2 1711 aa18.86■□□□□ 0.61
USP42-203ENST00000426246 PLEKHD1A6NEE1 506 aa18.86■□□□□ 0.61
USP42-203ENST00000426246 TTC37Q6PGP7 1564 aa18.84■□□□□ 0.61
USP42-203ENST00000426246 PREX2Q70Z35 1606 aa18.84■□□□□ 0.61
USP42-203ENST00000426246 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.83■□□□□ 0.6
USP42-203ENST00000426246 HNRNPUQ00839 825 aaKnown RBP eCLIP18.82■□□□□ 0.6
USP42-203ENST00000426246 FOXD1Q16676 465 aa18.81■□□□□ 0.6
USP42-203ENST00000426246 ROCK1Q13464 1354 aa18.8■□□□□ 0.6
USP42-203ENST00000426246 ADGBQ8N7X0 1667 aa18.79■□□□□ 0.6
USP42-203ENST00000426246 CFDP1Q9UEE9 299 aaPredicted RBP18.78■□□□□ 0.6
USP42-203ENST00000426246 OSCARQ8IYS5 282 aa18.78■□□□□ 0.6
USP42-203ENST00000426246 SAMD9LQ8IVG5 1584 aa18.78■□□□□ 0.6
USP42-203ENST00000426246 FAM9BQ8IZU0 186 aa18.77■□□□□ 0.6
USP42-203ENST00000426246 DENND4BO75064 1496 aaPredicted RBP18.77■□□□□ 0.59
USP42-203ENST00000426246 TONSLQ96HA7 1378 aa18.76■□□□□ 0.59
USP42-203ENST00000426246 TSHZ2Q9NRE2 1034 aa18.76■□□□□ 0.59
USP42-203ENST00000426246 ADGRL2O95490 1459 aa18.76■□□□□ 0.59
USP42-203ENST00000426246 MYO5CQ9NQX4 1742 aa18.75■□□□□ 0.59
USP42-203ENST00000426246 MBD5Q9P267 1494 aa18.74■□□□□ 0.59
USP42-203ENST00000426246 ARHGEF5Q12774 1597 aa18.74■□□□□ 0.59
USP42-203ENST00000426246 SHANK2Q9UPX8 1470 aa18.72■□□□□ 0.59
USP42-203ENST00000426246 NCOA1Q15788 1441 aa18.71■□□□□ 0.59
USP42-203ENST00000426246 ERICH6Q7L0X2 663 aa18.71■□□□□ 0.59
USP42-203ENST00000426246 ZNF777Q9ULD5 760 aaPredicted RBP18.69■□□□□ 0.58
USP42-203ENST00000426246 WDR7Q9Y4E6 1490 aa18.65■□□□□ 0.58
USP42-203ENST00000426246 SALL2Q9Y467 1007 aaPredicted RBP18.65■□□□□ 0.58
USP42-203ENST00000426246 ARHGAP5Q13017 1502 aa18.64■□□□□ 0.58
USP42-203ENST00000426246 SYCP2Q9BX26 1530 aa18.64■□□□□ 0.58
USP42-203ENST00000426246 PLCH2O75038 1416 aa18.64■□□□□ 0.57
USP42-203ENST00000426246 C9orf84Q5VXU9 1444 aa18.63■□□□□ 0.57
USP42-203ENST00000426246 ARHGEF12Q9NZN5 1544 aa18.63■□□□□ 0.57
USP42-203ENST00000426246 ABCA9Q8IUA7 1624 aa18.63■□□□□ 0.57
USP42-203ENST00000426246 ARAP3Q8WWN8 1544 aa18.62■□□□□ 0.57
USP42-203ENST00000426246 MAST1Q9Y2H9 1570 aa18.62■□□□□ 0.57
USP42-203ENST00000426246 CCDC141Q6ZP82 1450 aa18.61■□□□□ 0.57
USP42-203ENST00000426246 MYT1Q01538 1121 aa18.6■□□□□ 0.57
USP42-203ENST00000426246 KIAA1107Q9UPP5 1409 aa18.6■□□□□ 0.57
USP42-203ENST00000426246 HNRNPMP52272 730 aaKnown RBP eCLIP18.59■□□□□ 0.571e-6■■■□□ 14.6
USP42-203ENST00000426246 ABCC1P33527 1531 aa18.59■□□□□ 0.57
USP42-203ENST00000426246 PPP1R15AO75807 674 aaPredicted RBP18.59■□□□□ 0.57
USP42-203ENST00000426246 ASXL2Q76L83 1435 aa18.58■□□□□ 0.56
USP42-203ENST00000426246 ANKRD30AQ9BXX3 1397 aa18.57■□□□□ 0.56
USP42-203ENST00000426246 PZPP20742 1482 aa18.57■□□□□ 0.56
USP42-203ENST00000426246 PLXNC1O60486 1568 aa18.55■□□□□ 0.56
USP42-203ENST00000426246 PLEKHH2Q8IVE3 1493 aa18.55■□□□□ 0.56
USP42-203ENST00000426246 ANKRD50Q9ULJ7 1429 aa18.54■□□□□ 0.56
USP42-203ENST00000426246 MPHOSPH9Q99550 1183 aa18.53■□□□□ 0.56
USP42-203ENST00000426246 KDM5DQ9BY66 1539 aa18.52■□□□□ 0.56
USP42-203ENST00000426246 RSPH4AQ5TD94 716 aa18.51■□□□□ 0.55
USP42-203ENST00000426246 MRS2Q9HD23 443 aa18.51■□□□□ 0.55
USP42-203ENST00000426246 TIMELESSQ9UNS1 1208 aa18.51■□□□□ 0.55
USP42-203ENST00000426246 RIMBP3CA6NJZ7 1639 aa18.51■□□□□ 0.55
USP42-203ENST00000426246 RIMBP3BA6NNM3 1639 aa18.51■□□□□ 0.55
USP42-203ENST00000426246 RIMBP3Q9UFD9 1639 aa18.51■□□□□ 0.55
USP42-203ENST00000426246 RBM19Q9Y4C8 960 aaKnown RBP18.5■□□□□ 0.55
USP42-203ENST00000426246 KIF15Q9NS87 1388 aa18.5■□□□□ 0.55
USP42-203ENST00000426246 KDM2AQ9Y2K7 1162 aa18.49■□□□□ 0.55
USP42-203ENST00000426246 HSPA5P11021 654 aaKnown RBP18.48■□□□□ 0.55
USP42-203ENST00000426246 B4GALNT3Q6L9W6 998 aa18.48■□□□□ 0.55
USP42-203ENST00000426246 TRAPPC8Q9Y2L5 1435 aa18.48■□□□□ 0.55
USP42-203ENST00000426246 TSPY4P0CV99 314 aa18.48■□□□□ 0.55
USP42-203ENST00000426246 TSPY10P0CW01 314 aa18.48■□□□□ 0.55
USP42-203ENST00000426246 ANKRD30BQ9BXX2 1392 aa18.48■□□□□ 0.55
USP42-203ENST00000426246 CCDC184Q52MB2 194 aa18.46■□□□□ 0.55
USP42-203ENST00000426246 EFCAB2Q5VUJ9 269 aa18.46■□□□□ 0.54
USP42-203ENST00000426246 ANP32EQ9BTT0 268 aa18.46■□□□□ 0.54
USP42-203ENST00000426246 FANCAO15360 1455 aa18.45■□□□□ 0.54
USP42-203ENST00000426246 UNC13BO14795 1591 aa18.45■□□□□ 0.54
USP42-203ENST00000426246 ZFYVE16Q7Z3T8 1539 aa18.44■□□□□ 0.54
USP42-203ENST00000426246 INO80Q9ULG1 1556 aaPredicted RBP18.42■□□□□ 0.54
USP42-203ENST00000426246 SLC4A1APQ9BWU0 796 aaKnown RBP18.42■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms