RNA–Protein interactions for RNA: ENST00000424438.5

RPUSD3-204, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 2 BASIC

Gene RPUSD3, Length 1,005 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-204ENST00000424438 ILDR2Q71H61 639 aa26.15■■□□□ 1.78
RPUSD3-204ENST00000424438 FER1L4A9Z1Z3 1794 aa26.13■■□□□ 1.77
RPUSD3-204ENST00000424438 CDK13Q14004 1512 aaKnown RBP26.11■■□□□ 1.77
RPUSD3-204ENST00000424438 ARHGEF12Q9NZN5 1544 aa26.1■■□□□ 1.77
RPUSD3-204ENST00000424438 SCAPERQ9BY12 1400 aa26.1■■□□□ 1.77
RPUSD3-204ENST00000424438 ATP10AO60312 1499 aa26.09■■□□□ 1.77
RPUSD3-204ENST00000424438 MYO5CQ9NQX4 1742 aa26.08■■□□□ 1.76
RPUSD3-204ENST00000424438 FMN1Q68DA7 1419 aa26.07■■□□□ 1.76
RPUSD3-204ENST00000424438 C9orf84Q5VXU9 1444 aa26.06■■□□□ 1.76
RPUSD3-204ENST00000424438 RANGAP1P46060 587 aaPredicted RBP26.06■■□□□ 1.76
RPUSD3-204ENST00000424438 EFCAB2Q5VUJ9 269 aa26.03■■□□□ 1.76
RPUSD3-204ENST00000424438 PREX1Q8TCU6 1659 aa26.03■■□□□ 1.76
RPUSD3-204ENST00000424438 MLECQ14165 292 aa26.02■■□□□ 1.76
RPUSD3-204ENST00000424438 KDM5CP41229 1560 aa26.01■■□□□ 1.75
RPUSD3-204ENST00000424438 ZNF518AQ6AHZ1 1483 aa26.01■■□□□ 1.75
RPUSD3-204ENST00000424438 CDK11AQ9UQ88 783 aaPredicted RBP26.01■■□□□ 1.75
RPUSD3-204ENST00000424438 SETD1BQ9UPS6 1966 aaKnown RBP26■■□□□ 1.75
RPUSD3-204ENST00000424438 DMRT2Q9Y5R5 561 aa26■■□□□ 1.75
RPUSD3-204ENST00000424438 REREQ9P2R6 1566 aa25.99■■□□□ 1.75
RPUSD3-204ENST00000424438 KIF14Q15058 1648 aa25.98■■□□□ 1.75
RPUSD3-204ENST00000424438 TROQ12816 1431 aaPredicted RBP25.97■■□□□ 1.75
RPUSD3-204ENST00000424438 ARHGAP35Q9NRY4 1499 aa25.95■■□□□ 1.74
RPUSD3-204ENST00000424438 CLIP1P30622 1438 aa25.9■■□□□ 1.74
RPUSD3-204ENST00000424438 SPATA31D1Q6ZQQ2 1576 aa25.9■■□□□ 1.74
RPUSD3-204ENST00000424438 MLH3Q9UHC1 1453 aa25.89■■□□□ 1.73
RPUSD3-204ENST00000424438 ARHGAP5Q13017 1502 aa25.88■■□□□ 1.73
RPUSD3-204ENST00000424438 DIP2CQ9Y2E4 1556 aa25.88■■□□□ 1.73
RPUSD3-204ENST00000424438 AGLP35573 1532 aa25.88■■□□□ 1.73
RPUSD3-204ENST00000424438 STRCQ7RTU9 1775 aa25.87■■□□□ 1.73
RPUSD3-204ENST00000424438 UHRF1BP1Q6BDS2 1440 aa25.86■■□□□ 1.73
RPUSD3-204ENST00000424438 CDC42BPBQ9Y5S2 1711 aa25.85■■□□□ 1.73
RPUSD3-204ENST00000424438 LRRIQ1Q96JM4 1722 aa25.83■■□□□ 1.73
RPUSD3-204ENST00000424438 UBTFP17480 764 aaKnown RBP25.83■■□□□ 1.73
RPUSD3-204ENST00000424438 PREX2Q70Z35 1606 aa25.82■■□□□ 1.72
RPUSD3-204ENST00000424438 AFAP1Q8N556 730 aa25.82■■□□□ 1.72
RPUSD3-204ENST00000424438 CEBPAP49715 358 aaPredicted RBP25.81■■□□□ 1.72
RPUSD3-204ENST00000424438 ABCA6Q8N139 1617 aa25.81■■□□□ 1.72
RPUSD3-204ENST00000424438 ABCC1P33527 1531 aa25.8■■□□□ 1.72
RPUSD3-204ENST00000424438 PTPRTO14522 1441 aa25.8■■□□□ 1.72
RPUSD3-204ENST00000424438 ATP1B4Q9UN42 357 aaPredicted RBP25.79■■□□□ 1.72
RPUSD3-204ENST00000424438 C3P01024 1663 aa25.79■■□□□ 1.72
RPUSD3-204ENST00000424438 CCDC18Q5T9S5 1454 aa25.79■■□□□ 1.72
RPUSD3-204ENST00000424438 ITSN2Q9NZM3 1697 aa25.76■■□□□ 1.71
RPUSD3-204ENST00000424438 CNTLNQ9NXG0 1405 aa25.75■■□□□ 1.71
RPUSD3-204ENST00000424438 CASKIN1Q8WXD9 1431 aa25.74■■□□□ 1.71
RPUSD3-204ENST00000424438 TRAPPC8Q9Y2L5 1435 aa25.72■■□□□ 1.71
RPUSD3-204ENST00000424438 KIDINS220Q9ULH0 1771 aa25.72■■□□□ 1.71
RPUSD3-204ENST00000424438 IQSEC2Q5JU85 1478 aa25.71■■□□□ 1.71
RPUSD3-204ENST00000424438 CDC42BPAQ5VT25 1732 aa25.69■■□□□ 1.7
RPUSD3-204ENST00000424438 MROH2AA6NES4 1674 aa25.69■■□□□ 1.7
RPUSD3-204ENST00000424438 NPATQ14207 1427 aa25.67■■□□□ 1.7
RPUSD3-204ENST00000424438 MYT1LQ9UL68 1186 aa25.66■■□□□ 1.7
RPUSD3-204ENST00000424438 ESF1Q9H501 851 aaKnown RBP25.65■■□□□ 1.7
RPUSD3-204ENST00000424438 NCOA1Q15788 1441 aa25.64■■□□□ 1.7
RPUSD3-204ENST00000424438 LTBP4Q8N2S1 1624 aa25.64■■□□□ 1.7
RPUSD3-204ENST00000424438 FYCO1Q9BQS8 1478 aa25.63■■□□□ 1.69
RPUSD3-204ENST00000424438 SAMD9LQ8IVG5 1584 aa25.62■■□□□ 1.69
RPUSD3-204ENST00000424438 KIAA1107Q9UPP5 1409 aa25.57■■□□□ 1.68
RPUSD3-204ENST00000424438 CHIC1Q5VXU3 224 aa25.57■■□□□ 1.68
RPUSD3-204ENST00000424438 PLEKHH2Q8IVE3 1493 aa25.55■■□□□ 1.68
RPUSD3-204ENST00000424438 PLXNC1O60486 1568 aa25.55■■□□□ 1.68
RPUSD3-204ENST00000424438 GPATCH8Q9UKJ3 1502 aaKnown RBP25.54■■□□□ 1.68
RPUSD3-204ENST00000424438 EHMT2Q96KQ7 1210 aa25.54■■□□□ 1.68
RPUSD3-204ENST00000424438 SYCP2Q9BX26 1530 aa25.53■■□□□ 1.68
RPUSD3-204ENST00000424438 ZNF142P52746 1687 aaPredicted RBP25.53■■□□□ 1.68
RPUSD3-204ENST00000424438 UBAP1LF5GYI3 381 aa25.52■■□□□ 1.68
RPUSD3-204ENST00000424438 ZMYM3Q14202 1370 aa25.52■■□□□ 1.68
RPUSD3-204ENST00000424438 INO80Q9ULG1 1556 aaPredicted RBP25.52■■□□□ 1.68
RPUSD3-204ENST00000424438 CAMSAP1Q5T5Y3 1602 aa25.52■■□□□ 1.68
RPUSD3-204ENST00000424438 PLA2R1Q13018 1463 aa25.51■■□□□ 1.67
RPUSD3-204ENST00000424438 ATP7AQ04656 1500 aa25.51■■□□□ 1.67
RPUSD3-204ENST00000424438 SPAG9O60271 1321 aaKnown RBP25.5■■□□□ 1.67
RPUSD3-204ENST00000424438 PPP6R1Q9UPN7 881 aa25.48■■□□□ 1.67
RPUSD3-204ENST00000424438 SUPT6HQ7KZ85 1726 aaKnown RBP25.47■■□□□ 1.67
RPUSD3-204ENST00000424438 A2MP01023 1474 aa25.46■■□□□ 1.67
RPUSD3-204ENST00000424438 MYO3AQ8NEV4 1616 aa25.45■■□□□ 1.66
RPUSD3-204ENST00000424438 CLTCQ00610 1675 aaKnown RBP25.44■■□□□ 1.66
RPUSD3-204ENST00000424438 TCOF1Q13428 1488 aaKnown RBP25.43■■□□□ 1.66
RPUSD3-204ENST00000424438 PKD2Q13563 968 aa25.43■■□□□ 1.66
RPUSD3-204ENST00000424438 PTPRKQ15262 1439 aa25.43■■□□□ 1.66
RPUSD3-204ENST00000424438 ADGBQ8N7X0 1667 aa25.42■■□□□ 1.66
RPUSD3-204ENST00000424438 CEP170BQ9Y4F5 1589 aaPredicted RBP25.42■■□□□ 1.66
RPUSD3-204ENST00000424438 ZNF335Q9H4Z2 1342 aaPredicted RBP25.4■■□□□ 1.66
RPUSD3-204ENST00000424438 ZNF777Q9ULD5 760 aaPredicted RBP25.4■■□□□ 1.66
RPUSD3-204ENST00000424438 HNRNPMP52272 730 aaKnown RBP eCLIP25.39■■□□□ 1.66
RPUSD3-204ENST00000424438 CFDP1Q9UEE9 299 aaPredicted RBP25.39■■□□□ 1.66
RPUSD3-204ENST00000424438 CCNB3Q8WWL7 1395 aa25.38■■□□□ 1.65
RPUSD3-204ENST00000424438 NCKAP5LQ9HCH0 1330 aa25.37■■□□□ 1.65
RPUSD3-204ENST00000424438 FAM135AQ9P2D6 1515 aa25.36■■□□□ 1.65
RPUSD3-204ENST00000424438 RTEL1-TNFRSF6BF6WH68 1400 aa25.35■■□□□ 1.65
RPUSD3-204ENST00000424438 SCAF1Q9H7N4 1312 aaKnown RBP25.33■■□□□ 1.64
RPUSD3-204ENST00000424438 A2ML1A8K2U0 1454 aa25.32■■□□□ 1.64
RPUSD3-204ENST00000424438 MBD5Q9P267 1494 aa25.32■■□□□ 1.64
RPUSD3-204ENST00000424438 MTUS2Q5JR59 1369 aa25.31■■□□□ 1.64
RPUSD3-204ENST00000424438 TIAM1Q13009 1591 aa25.31■■□□□ 1.64
RPUSD3-204ENST00000424438 EHBP1L1Q8N3D4 1523 aa25.28■■□□□ 1.64
RPUSD3-204ENST00000424438 DNMT1P26358 1616 aaKnown RBP25.27■■□□□ 1.64
RPUSD3-204ENST00000424438 GGT6Q6P531 493 aa25.27■■□□□ 1.64
RPUSD3-204ENST00000424438 HSPA1LP34931 641 aa25.26■■□□□ 1.63
RPUSD3-204ENST00000424438 DHX29Q7Z478 1369 aaKnown RBP25.26■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms