RNA–Protein interactions for RNA: ENST00000419890.3

TVP23C-202, Transcript of trans-golgi network vesicle protein 23 homolog C, humanhuman

TSL 5

Gene TVP23C, Length 537 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23C-202ENST00000419890 PPARGC1BQ86YN6 1023 aaKnown RBP11.04□□□□□ -0.64
TVP23C-202ENST00000419890 DPY19L2Q6NUT2 758 aa11.03□□□□□ -0.64
TVP23C-202ENST00000419890 PDAP1Q13442 181 aaKnown RBP11.01□□□□□ -0.65
TVP23C-202ENST00000419890 NESP48681 1621 aa11□□□□□ -0.65
TVP23C-202ENST00000419890 EMP3P54852 163 aa11□□□□□ -0.65
TVP23C-202ENST00000419890 IFNLR1Q8IU57 520 aaPredicted RBP10.99□□□□□ -0.65
TVP23C-202ENST00000419890 KRTAP3-3Q9BYR6 98 aa10.99□□□□□ -0.65
TVP23C-202ENST00000419890 KRTAP3-2Q9BYR7 98 aa10.99□□□□□ -0.65
TVP23C-202ENST00000419890 ERCC6Q03468 1493 aa10.99□□□□□ -0.65
TVP23C-202ENST00000419890 HS3ST6Q96QI5 342 aa10.97□□□□□ -0.65
TVP23C-202ENST00000419890 CABP2Q9NPB3 220 aa10.96□□□□□ -0.65
TVP23C-202ENST00000419890 HOXB3P14651 431 aaPredicted RBP10.95□□□□□ -0.66
TVP23C-202ENST00000419890 SPOCK2Q92563 424 aa10.95□□□□□ -0.66
TVP23C-202ENST00000419890 TOP2AP11388 1531 aaKnown RBP10.94□□□□□ -0.66
TVP23C-202ENST00000419890 CADPSQ9ULU8 1353 aa10.93□□□□□ -0.66
TVP23C-202ENST00000419890 LOC105371045A0A1W2PR82 267 aa10.93□□□□□ -0.66
TVP23C-202ENST00000419890 FAM205CA6NFA0 338 aa10.93□□□□□ -0.66
TVP23C-202ENST00000419890 BOLA1Q9Y3E2 137 aa10.93□□□□□ -0.66
TVP23C-202ENST00000419890 LAMC3Q9Y6N6 1575 aa10.93□□□□□ -0.66
TVP23C-202ENST00000419890 CIZ1Q9ULV3 898 aaPredicted RBP10.92□□□□□ -0.66
TVP23C-202ENST00000419890 PDS5BQ9NTI5 1447 aa10.9□□□□□ -0.66
TVP23C-202ENST00000419890 CCDC88BA6NC98 1476 aa10.86□□□□□ -0.67
TVP23C-202ENST00000419890 HOXB1P14653 301 aaPredicted RBP10.84□□□□□ -0.67
TVP23C-202ENST00000419890 CUX2O14529 1486 aa10.84□□□□□ -0.67
TVP23C-202ENST00000419890 KIF21AQ7Z4S6 1674 aa10.84□□□□□ -0.67
TVP23C-202ENST00000419890 MYT1Q01538 1121 aa10.83□□□□□ -0.68
TVP23C-202ENST00000419890 TRIM41Q8WV44 630 aa10.83□□□□□ -0.68
TVP23C-202ENST00000419890 CFTRP13569 1480 aa10.82□□□□□ -0.68
TVP23C-202ENST00000419890 G3V3G9 751 aa10.82□□□□□ -0.68
TVP23C-202ENST00000419890 EFCAB3Q8N7B9 438 aa10.82□□□□□ -0.68
TVP23C-202ENST00000419890 FANCD2Q9BXW9 1451 aa10.79□□□□□ -0.68
TVP23C-202ENST00000419890 THOC2Q8NI27 1593 aaKnown RBP10.78□□□□□ -0.68
TVP23C-202ENST00000419890 WRNQ14191 1432 aaPredicted RBP eCLIP10.78□□□□□ -0.68
TVP23C-202ENST00000419890 DOK7Q18PE1 504 aa10.78□□□□□ -0.68
TVP23C-202ENST00000419890 TMEM92Q6UXU6 159 aa10.78□□□□□ -0.68
TVP23C-202ENST00000419890 CEP164Q9UPV0 1460 aa10.77□□□□□ -0.69
TVP23C-202ENST00000419890 ZNF710Q8N1W2 664 aa10.77□□□□□ -0.69
TVP23C-202ENST00000419890 MRC2Q9UBG0 1479 aa10.76□□□□□ -0.69
TVP23C-202ENST00000419890 MICALL2Q8IY33 904 aa10.74□□□□□ -0.69
TVP23C-202ENST00000419890 ERBB3P21860 1342 aa10.74□□□□□ -0.69
TVP23C-202ENST00000419890 MS4A4AQ96JQ5 239 aa10.73□□□□□ -0.69
TVP23C-202ENST00000419890 RNF25Q96BH1 459 aaPredicted RBP10.72□□□□□ -0.69
TVP23C-202ENST00000419890 PRDM2Q13029 1718 aa10.71□□□□□ -0.69
TVP23C-202ENST00000419890 WDR62O43379 1518 aa10.7□□□□□ -0.7
TVP23C-202ENST00000419890 EEA1Q15075 1411 aa10.69□□□□□ -0.7
TVP23C-202ENST00000419890 VARS2Q5ST30 1063 aaKnown RBP10.69□□□□□ -0.7
TVP23C-202ENST00000419890 SOX12O15370 315 aa10.68□□□□□ -0.7
TVP23C-202ENST00000419890 GPR153Q6NV75 609 aa10.68□□□□□ -0.7
TVP23C-202ENST00000419890 ZSWIM6Q9HCJ5 1215 aa10.68□□□□□ -0.7
TVP23C-202ENST00000419890 RIMBP2O15034 1052 aa10.67□□□□□ -0.7
TVP23C-202ENST00000419890 URB2Q14146 1524 aaKnown RBP10.67□□□□□ -0.7
TVP23C-202ENST00000419890 ACIN1Q9UKV3 1341 aaKnown RBP10.66□□□□□ -0.7
TVP23C-202ENST00000419890 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.66□□□□□ -0.7
TVP23C-202ENST00000419890 RIOK3O14730 519 aaKnown RBP10.66□□□□□ -0.7
TVP23C-202ENST00000419890 ZFP91Q96JP5 570 aaPredicted RBP10.66□□□□□ -0.7
TVP23C-202ENST00000419890 PHF8Q9UPP1 1060 aa10.65□□□□□ -0.7
TVP23C-202ENST00000419890 CENPBP07199 599 aaPredicted RBP10.64□□□□□ -0.71
TVP23C-202ENST00000419890 ZNF687Q8N1G0 1237 aa10.64□□□□□ -0.71
TVP23C-202ENST00000419890 RNF166Q96A37 237 aaPredicted RBP10.63□□□□□ -0.71
TVP23C-202ENST00000419890 DNAJC5Q9H3Z4 198 aa10.62□□□□□ -0.71
TVP23C-202ENST00000419890 VGFO15240 615 aaPredicted RBP10.61□□□□□ -0.71
TVP23C-202ENST00000419890 TOPBP1Q92547 1522 aa10.61□□□□□ -0.71
TVP23C-202ENST00000419890 ABCC8Q09428 1581 aa10.6□□□□□ -0.71
TVP23C-202ENST00000419890 TNIKQ9UKE5 1360 aa10.59□□□□□ -0.71
TVP23C-202ENST00000419890 DNMBPQ6XZF7 1577 aa10.58□□□□□ -0.72
TVP23C-202ENST00000419890 MYT1LQ9UL68 1186 aa10.58□□□□□ -0.72
TVP23C-202ENST00000419890 ARSIQ5FYB1 569 aa10.57□□□□□ -0.72
TVP23C-202ENST00000419890 FBXO22Q8NEZ5 403 aa10.57□□□□□ -0.72
TVP23C-202ENST00000419890 CEP162Q5TB80 1403 aa10.56□□□□□ -0.72
TVP23C-202ENST00000419890 IFT140Q96RY7 1462 aa10.55□□□□□ -0.72
TVP23C-202ENST00000419890 CCER1Q8TC90 406 aaPredicted RBP10.54□□□□□ -0.72
TVP23C-202ENST00000419890 KHSRPQ92945 711 aaKnown RBP eCLIP10.54□□□□□ -0.72
TVP23C-202ENST00000419890 FAM9AQ8IZU1 332 aaPredicted RBP10.53□□□□□ -0.72
TVP23C-202ENST00000419890 DIEXFQ68CQ4 756 aaKnown RBP10.52□□□□□ -0.73
TVP23C-202ENST00000419890 ZNF608Q9ULD9 1512 aaPredicted RBP10.52□□□□□ -0.73
TVP23C-202ENST00000419890 KIF21BO75037 1637 aa10.51□□□□□ -0.73
TVP23C-202ENST00000419890 SOGA1O94964 1423 aa10.51□□□□□ -0.73
TVP23C-202ENST00000419890 GOLGA3Q08378 1498 aa10.51□□□□□ -0.73
TVP23C-202ENST00000419890 ZNF316A6NFI3 1004 aaPredicted RBP10.51□□□□□ -0.73
TVP23C-202ENST00000419890 NLRP6P59044 892 aa10.51□□□□□ -0.73
TVP23C-202ENST00000419890 CUX1P39880 1505 aa10.51□□□□□ -0.73
TVP23C-202ENST00000419890 POLA1P09884 1462 aaPredicted RBP10.5□□□□□ -0.73
TVP23C-202ENST00000419890 KIF3CO14782 793 aa10.5□□□□□ -0.73
TVP23C-202ENST00000419890 NEUROD1Q13562 356 aa10.5□□□□□ -0.73
TVP23C-202ENST00000419890 RAD54L2Q9Y4B4 1467 aa10.49□□□□□ -0.73
TVP23C-202ENST00000419890 PTGER2P43116 358 aa10.49□□□□□ -0.73
TVP23C-202ENST00000419890 MFRPQ9BY79 579 aa10.49□□□□□ -0.73
TVP23C-202ENST00000419890 BCL11BQ9C0K0 894 aaPredicted RBP10.49□□□□□ -0.73
TVP23C-202ENST00000419890 AQRO60306 1485 aaKnown RBP eCLIP10.49□□□□□ -0.73
TVP23C-202ENST00000419890 FGD5Q6ZNL6 1462 aa10.49□□□□□ -0.73
TVP23C-202ENST00000419890 CLSPNQ9HAW4 1339 aa10.48□□□□□ -0.73
TVP23C-202ENST00000419890 TARBP1Q13395 1621 aaKnown RBP10.47□□□□□ -0.73
TVP23C-202ENST00000419890 TDRD9Q8NDG6 1382 aaKnown RBP10.47□□□□□ -0.73
TVP23C-202ENST00000419890 ANKRD13DQ6ZTN6 518 aa10.45□□□□□ -0.74
TVP23C-202ENST00000419890 C2orf72A6NCS6 295 aa10.44□□□□□ -0.74
TVP23C-202ENST00000419890 LSM11P83369 360 aaKnown RBP eCLIP10.44□□□□□ -0.74
TVP23C-202ENST00000419890 EIF4G3O43432 1585 aaKnown RBP10.43□□□□□ -0.74
TVP23C-202ENST00000419890 POTEEQ6S8J3 1075 aa10.43□□□□□ -0.74
TVP23C-202ENST00000419890 GTF3C3Q9Y5Q9 886 aa10.43□□□□□ -0.74
TVP23C-202ENST00000419890 STK24Q9Y6E0 443 aa10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms