RNA–Protein interactions for RNA: ENST00000419629.1

SDCBPP3-201, Transcript of syndecan binding protein pseudogene 3, humanhuman

BASIC

Gene SDCBPP3, Length 891 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBPP3-201ENST00000419629 NLRP6P59044 892 aa10.46□□□□□ -0.73
SDCBPP3-201ENST00000419629 STK24Q9Y6E0 443 aa10.44□□□□□ -0.74
SDCBPP3-201ENST00000419629 ECM2O94769 699 aaPredicted RBP10.43□□□□□ -0.74
SDCBPP3-201ENST00000419629 PKD2Q13563 968 aa10.43□□□□□ -0.74
SDCBPP3-201ENST00000419629 MFRPQ9BY79 579 aa10.42□□□□□ -0.74
SDCBPP3-201ENST00000419629 STK25O00506 426 aa10.41□□□□□ -0.74
SDCBPP3-201ENST00000419629 RIMBP2O15034 1052 aa10.41□□□□□ -0.74
SDCBPP3-201ENST00000419629 ERBB3P21860 1342 aa10.4□□□□□ -0.74
SDCBPP3-201ENST00000419629 ZSWIM6Q9HCJ5 1215 aa10.4□□□□□ -0.74
SDCBPP3-201ENST00000419629 RGL2O15211 777 aa10.39□□□□□ -0.75
SDCBPP3-201ENST00000419629 GPR153Q6NV75 609 aa10.38□□□□□ -0.75
SDCBPP3-201ENST00000419629 VARS2Q5ST30 1063 aaKnown RBP10.35□□□□□ -0.75
SDCBPP3-201ENST00000419629 KIF3CO14782 793 aa10.31□□□□□ -0.76
SDCBPP3-201ENST00000419629 ARSIQ5FYB1 569 aa10.31□□□□□ -0.76
SDCBPP3-201ENST00000419629 C2orf72A6NCS6 295 aa10.29□□□□□ -0.76
SDCBPP3-201ENST00000419629 ZNF687Q8N1G0 1237 aa10.28□□□□□ -0.76
SDCBPP3-201ENST00000419629 KHSRPQ92945 711 aaKnown RBP eCLIP10.27□□□□□ -0.77
SDCBPP3-201ENST00000419629 PPP1R37O75864 691 aa10.24□□□□□ -0.77
SDCBPP3-201ENST00000419629 ZNF316A6NFI3 1004 aaPredicted RBP10.23□□□□□ -0.77
SDCBPP3-201ENST00000419629 SLC34A2O95436 690 aa10.2□□□□□ -0.78
SDCBPP3-201ENST00000419629 TMC2Q8TDI7 906 aa10.19□□□□□ -0.78
SDCBPP3-201ENST00000419629 NUDT7P0C024 238 aa10.17□□□□□ -0.78
SDCBPP3-201ENST00000419629 HS6ST3Q8IZP7 471 aa10.17□□□□□ -0.78
SDCBPP3-201ENST00000419629 PCDHGA4Q9Y5G9 962 aa10.17□□□□□ -0.78
SDCBPP3-201ENST00000419629 RNF166Q96A37 237 aaPredicted RBP10.15□□□□□ -0.78
SDCBPP3-201ENST00000419629 MYT1LQ9UL68 1186 aa10.15□□□□□ -0.78
SDCBPP3-201ENST00000419629 LHX6Q9UPM6 363 aa10.14□□□□□ -0.79
SDCBPP3-201ENST00000419629 ANKRD13DQ6ZTN6 518 aa10.12□□□□□ -0.79
SDCBPP3-201ENST00000419629 LSM11P83369 360 aaKnown RBP eCLIP10.11□□□□□ -0.79
SDCBPP3-201ENST00000419629 KDM4FA0A1W2PPD8 638 aa10.09□□□□□ -0.79
SDCBPP3-201ENST00000419629 CHGAP10645 457 aaKnown RBP10.09□□□□□ -0.79
SDCBPP3-201ENST00000419629 PTGER2P43116 358 aa10.09□□□□□ -0.79
SDCBPP3-201ENST00000419629 POTEEQ6S8J3 1075 aa10.09□□□□□ -0.79
SDCBPP3-201ENST00000419629 PBX2P40425 430 aa10.08□□□□□ -0.8
SDCBPP3-201ENST00000419629 FOXK1P85037 733 aa10.08□□□□□ -0.8
SDCBPP3-201ENST00000419629 PTCD2Q8WV60 388 aaKnown RBP10.08□□□□□ -0.8
SDCBPP3-201ENST00000419629 NKX1-1Q15270 411 aaPredicted RBP10.07□□□□□ -0.8
SDCBPP3-201ENST00000419629 DNAJC5Q9H3Z4 198 aa10.07□□□□□ -0.8
SDCBPP3-201ENST00000419629 GPHNQ9NQX3 736 aaPredicted RBP10.07□□□□□ -0.8
SDCBPP3-201ENST00000419629 PLPP6Q8IY26 295 aa10.06□□□□□ -0.8
SDCBPP3-201ENST00000419629 AXIN2Q9Y2T1 843 aa10.05□□□□□ -0.8
SDCBPP3-201ENST00000419629 DSG2Q14126 1118 aa10.04□□□□□ -0.8
SDCBPP3-201ENST00000419629 PSDA5PKW4 1024 aaPredicted RBP10.01□□□□□ -0.81
SDCBPP3-201ENST00000419629 ARHGAP33O14559 1287 aa9.99□□□□□ -0.81
SDCBPP3-201ENST00000419629 RYDENQ9NUL5 291 aaKnown RBP9.97□□□□□ -0.81
SDCBPP3-201ENST00000419629 TBC1D12O60347 775 aa9.96□□□□□ -0.82
SDCBPP3-201ENST00000419629 CRISPLD2Q9H0B8 497 aa9.96□□□□□ -0.82
SDCBPP3-201ENST00000419629 ADGRD1Q6QNK2 874 aa9.95□□□□□ -0.82
SDCBPP3-201ENST00000419629 OXER1Q8TDS5 423 aa9.94□□□□□ -0.82
SDCBPP3-201ENST00000419629 DMRTA1Q5VZB9 504 aa9.93□□□□□ -0.82
SDCBPP3-201ENST00000419629 PSEN2P49810 448 aa9.92□□□□□ -0.82
SDCBPP3-201ENST00000419629 TK2O00142 265 aa9.91□□□□□ -0.82
SDCBPP3-201ENST00000419629 PPP4R3BQ5MIZ7 849 aa9.91□□□□□ -0.82
SDCBPP3-201ENST00000419629 NCKAP5LQ9HCH0 1330 aa9.9□□□□□ -0.82
SDCBPP3-201ENST00000419629 GTPBP6O43824 516 aaPredicted RBP9.9□□□□□ -0.82
SDCBPP3-201ENST00000419629 HRO43593 1189 aa9.89□□□□□ -0.83
SDCBPP3-201ENST00000419629 PPP1R15BQ5SWA1 713 aa9.89□□□□□ -0.83
SDCBPP3-201ENST00000419629 UPF1Q92900 1129 aaKnown RBP eCLIP9.89□□□□□ -0.83
SDCBPP3-201ENST00000419629 PDE4AP27815 886 aa9.86□□□□□ -0.83
SDCBPP3-201ENST00000419629 KCNK17Q96T54 332 aa9.85□□□□□ -0.83
SDCBPP3-201ENST00000419629 HCSTQ9UBK5 93 aa9.85□□□□□ -0.83
SDCBPP3-201ENST00000419629 ANO8Q9HCE9 1232 aaPredicted RBP9.83□□□□□ -0.84
SDCBPP3-201ENST00000419629 ZNF454Q8N9F8 522 aa9.82□□□□□ -0.84
SDCBPP3-201ENST00000419629 FOSBP53539 338 aa9.81□□□□□ -0.84
SDCBPP3-201ENST00000419629 LARP6Q9BRS8 491 aaKnown RBP9.81□□□□□ -0.84
SDCBPP3-201ENST00000419629 BCL2L12Q9HB09 334 aa9.81□□□□□ -0.84
SDCBPP3-201ENST00000419629 VPS9D1Q9Y2B5 631 aa9.8□□□□□ -0.84
SDCBPP3-201ENST00000419629 KCNH8Q96L42 1107 aa9.79□□□□□ -0.84
SDCBPP3-201ENST00000419629 PLA2G2EQ9NZK7 142 aa9.79□□□□□ -0.84
SDCBPP3-201ENST00000419629 MFSD10Q14728 455 aa9.78□□□□□ -0.84
SDCBPP3-201ENST00000419629 DDX27Q96GQ7 796 aaKnown RBP9.78□□□□□ -0.84
SDCBPP3-201ENST00000419629 SLC4A5Q9BY07 1137 aa9.78□□□□□ -0.84
SDCBPP3-201ENST00000419629 EVI5O60447 810 aa9.77□□□□□ -0.85
SDCBPP3-201ENST00000419629 KCTD12Q96CX2 325 aaKnown RBP9.76□□□□□ -0.85
SDCBPP3-201ENST00000419629 JPH4Q96JJ6 628 aa9.76□□□□□ -0.85
SDCBPP3-201ENST00000419629 STAC3Q96MF2 364 aa9.76□□□□□ -0.85
SDCBPP3-201ENST00000419629 DCAF8L2P0C7V8 631 aa9.75□□□□□ -0.85
SDCBPP3-201ENST00000419629 EMILIN3Q9NT22 766 aa9.74□□□□□ -0.85
SDCBPP3-201ENST00000419629 BHMG1C9JSJ3 638 aaPredicted RBP9.73□□□□□ -0.85
SDCBPP3-201ENST00000419629 PTPREP23469 700 aa9.73□□□□□ -0.85
SDCBPP3-201ENST00000419629 MAP3K9P80192 1104 aa9.73□□□□□ -0.85
SDCBPP3-201ENST00000419629 CADPS2Q86UW7 1296 aa9.73□□□□□ -0.85
SDCBPP3-201ENST00000419629 ZDHHC16Q969W1 377 aa9.72□□□□□ -0.85
SDCBPP3-201ENST00000419629 ZBED2Q9BTP6 218 aa9.72□□□□□ -0.85
SDCBPP3-201ENST00000419629 ADAM33Q9BZ11 813 aa9.72□□□□□ -0.85
SDCBPP3-201ENST00000419629 PCDHGA10Q9Y5H3 936 aa9.67□□□□□ -0.86
SDCBPP3-201ENST00000419629 PTPN5P54829 565 aa9.66□□□□□ -0.86
SDCBPP3-201ENST00000419629 THSD4Q6ZMP0 1018 aa9.64□□□□□ -0.87
SDCBPP3-201ENST00000419629 CAMK2BQ13554 666 aa9.63□□□□□ -0.87
SDCBPP3-201ENST00000419629 MRPL50Q8N5N7 158 aaKnown RBP9.63□□□□□ -0.87
SDCBPP3-201ENST00000419629 PPP1R3GB7ZBB8 358 aa9.62□□□□□ -0.87
SDCBPP3-201ENST00000419629 COL9A1P20849 921 aa9.62□□□□□ -0.87
SDCBPP3-201ENST00000419629 WNT2BQ93097 391 aa9.62□□□□□ -0.87
SDCBPP3-201ENST00000419629 GOLGA8CPA6NN73 597 aa9.61□□□□□ -0.87
SDCBPP3-201ENST00000419629 PHF14O94880 888 aa9.61□□□□□ -0.87
SDCBPP3-201ENST00000419629 TYW1BQ6NUM6 668 aa9.61□□□□□ -0.87
SDCBPP3-201ENST00000419629 FBXW7Q969H0 707 aa9.6□□□□□ -0.87
SDCBPP3-201ENST00000419629 NBPF3Q9H094 633 aa9.6□□□□□ -0.87
SDCBPP3-201ENST00000419629 PROX2Q3B8N5 592 aa9.59□□□□□ -0.87
SDCBPP3-201ENST00000419629 RABGEF1Q9UJ41 708 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms