RNA–Protein interactions for RNA: ENST00000419338.5

DDX39B-206, Transcript of DExD-box helicase 39B, humanhuman

TSL 5

Gene DDX39B, Length 928 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-206ENST00000419338 ARHGEF12Q9NZN5 1544 aa23.53■■□□□ 1.36
DDX39B-206ENST00000419338 ATP10AO60312 1499 aa23.52■■□□□ 1.36
DDX39B-206ENST00000419338 CERKQ8TCT0 537 aa23.52■■□□□ 1.36
DDX39B-206ENST00000419338 C9orf84Q5VXU9 1444 aa23.51■■□□□ 1.35
DDX39B-206ENST00000419338 PLPPR3Q6T4P5 718 aa23.51■■□□□ 1.35
DDX39B-206ENST00000419338 MLECQ14165 292 aa23.5■■□□□ 1.35
DDX39B-206ENST00000419338 EFCAB2Q5VUJ9 269 aa23.48■■□□□ 1.35
DDX39B-206ENST00000419338 PREX1Q8TCU6 1659 aa23.48■■□□□ 1.35
DDX39B-206ENST00000419338 MYO5CQ9NQX4 1742 aa23.47■■□□□ 1.35
DDX39B-206ENST00000419338 FMN1Q68DA7 1419 aa23.47■■□□□ 1.35
DDX39B-206ENST00000419338 CDK11AQ9UQ88 783 aaPredicted RBP23.45■■□□□ 1.34
DDX39B-206ENST00000419338 ZNF518AQ6AHZ1 1483 aa23.44■■□□□ 1.34
DDX39B-206ENST00000419338 KIF14Q15058 1648 aa23.41■■□□□ 1.34
DDX39B-206ENST00000419338 KDM5CP41229 1560 aa23.4■■□□□ 1.34
DDX39B-206ENST00000419338 DMRT2Q9Y5R5 561 aa23.4■■□□□ 1.34
DDX39B-206ENST00000419338 REREQ9P2R6 1566 aa23.37■■□□□ 1.33
DDX39B-206ENST00000419338 TROQ12816 1431 aaPredicted RBP23.37■■□□□ 1.33
DDX39B-206ENST00000419338 UHRF1BP1Q6BDS2 1440 aa23.36■■□□□ 1.33
DDX39B-206ENST00000419338 SETD1BQ9UPS6 1966 aaKnown RBP23.36■■□□□ 1.33
DDX39B-206ENST00000419338 CLIP1P30622 1438 aa23.35■■□□□ 1.33
DDX39B-206ENST00000419338 ARHGAP5Q13017 1502 aa23.35■■□□□ 1.33
DDX39B-206ENST00000419338 ATP1B4Q9UN42 357 aaPredicted RBP23.35■■□□□ 1.33
DDX39B-206ENST00000419338 ARHGAP35Q9NRY4 1499 aa23.35■■□□□ 1.33
DDX39B-206ENST00000419338 CEBPAP49715 358 aaPredicted RBP23.34■■□□□ 1.33
DDX39B-206ENST00000419338 STRCQ7RTU9 1775 aa23.34■■□□□ 1.33
DDX39B-206ENST00000419338 DIP2CQ9Y2E4 1556 aa23.32■■□□□ 1.32
DDX39B-206ENST00000419338 AFAP1Q8N556 730 aa23.32■■□□□ 1.32
DDX39B-206ENST00000419338 UBTFP17480 764 aaKnown RBP23.31■■□□□ 1.32
DDX39B-206ENST00000419338 MLH3Q9UHC1 1453 aa23.3■■□□□ 1.32
DDX39B-206ENST00000419338 AGLP35573 1532 aa23.28■■□□□ 1.32
DDX39B-206ENST00000419338 PTPRTO14522 1441 aa23.27■■□□□ 1.32
DDX39B-206ENST00000419338 ABCA6Q8N139 1617 aa23.26■■□□□ 1.31
DDX39B-206ENST00000419338 CDC42BPBQ9Y5S2 1711 aa23.26■■□□□ 1.31
DDX39B-206ENST00000419338 MYT1LQ9UL68 1186 aa23.26■■□□□ 1.31
DDX39B-206ENST00000419338 C3P01024 1663 aa23.25■■□□□ 1.31
DDX39B-206ENST00000419338 ABCC1P33527 1531 aa23.23■■□□□ 1.31
DDX39B-206ENST00000419338 PREX2Q70Z35 1606 aa23.22■■□□□ 1.31
DDX39B-206ENST00000419338 LRRIQ1Q96JM4 1722 aa23.22■■□□□ 1.31
DDX39B-206ENST00000419338 TRAPPC8Q9Y2L5 1435 aa23.22■■□□□ 1.31
DDX39B-206ENST00000419338 ESF1Q9H501 851 aaKnown RBP23.21■■□□□ 1.31
DDX39B-206ENST00000419338 CNTLNQ9NXG0 1405 aa23.2■■□□□ 1.3
DDX39B-206ENST00000419338 DISP3Q9P2K9 1392 aa23.2■■□□□ 1.3
DDX39B-206ENST00000419338 CHIC1Q5VXU3 224 aa23.2■■□□□ 1.3
DDX39B-206ENST00000419338 CCDC18Q5T9S5 1454 aa23.19■■□□□ 1.3
DDX39B-206ENST00000419338 ITSN2Q9NZM3 1697 aa23.19■■□□□ 1.3
DDX39B-206ENST00000419338 IQSEC2Q5JU85 1478 aa23.17■■□□□ 1.3
DDX39B-206ENST00000419338 KIDINS220Q9ULH0 1771 aa23.16■■□□□ 1.3
DDX39B-206ENST00000419338 EHMT2Q96KQ7 1210 aa23.15■■□□□ 1.3
DDX39B-206ENST00000419338 LTBP4Q8N2S1 1624 aa23.14■■□□□ 1.29
DDX39B-206ENST00000419338 NCOA1Q15788 1441 aa23.14■■□□□ 1.29
DDX39B-206ENST00000419338 CASKIN1Q8WXD9 1431 aa23.14■■□□□ 1.29
DDX39B-206ENST00000419338 SOCS7O14512 581 aa23.13■■□□□ 1.29
DDX39B-206ENST00000419338 NPATQ14207 1427 aa23.12■■□□□ 1.29
DDX39B-206ENST00000419338 ILDR2Q71H61 639 aa23.12■■□□□ 1.29
DDX39B-206ENST00000419338 MROH2AA6NES4 1674 aa23.12■■□□□ 1.29
DDX39B-206ENST00000419338 CDC42BPAQ5VT25 1732 aa23.11■■□□□ 1.29
DDX39B-206ENST00000419338 SPATA31D1Q6ZQQ2 1576 aa23.09■■□□□ 1.29
DDX39B-206ENST00000419338 SAMD9LQ8IVG5 1584 aa23.08■■□□□ 1.29
DDX39B-206ENST00000419338 CAMSAP1Q5T5Y3 1602 aa23.04■■□□□ 1.28
DDX39B-206ENST00000419338 FYCO1Q9BQS8 1478 aa23.04■■□□□ 1.28
DDX39B-206ENST00000419338 ZMYM3Q14202 1370 aa23.03■■□□□ 1.28
DDX39B-206ENST00000419338 SYCP2Q9BX26 1530 aa23.01■■□□□ 1.27
DDX39B-206ENST00000419338 SPAG9O60271 1321 aaKnown RBP23.01■■□□□ 1.27
DDX39B-206ENST00000419338 KIAA1107Q9UPP5 1409 aa22.99■■□□□ 1.27
DDX39B-206ENST00000419338 PLA2R1Q13018 1463 aa22.99■■□□□ 1.27
DDX39B-206ENST00000419338 GPATCH8Q9UKJ3 1502 aaKnown RBP22.99■■□□□ 1.27
DDX39B-206ENST00000419338 ZNF142P52746 1687 aaPredicted RBP22.99■■□□□ 1.27
DDX39B-206ENST00000419338 PLEKHH2Q8IVE3 1493 aa22.98■■□□□ 1.27
DDX39B-206ENST00000419338 PLXNC1O60486 1568 aa22.98■■□□□ 1.27
DDX39B-206ENST00000419338 ATP7AQ04656 1500 aa22.98■■□□□ 1.27
DDX39B-206ENST00000419338 SUPT6HQ7KZ85 1726 aaKnown RBP22.97■■□□□ 1.27
DDX39B-206ENST00000419338 PKD2Q13563 968 aa22.97■■□□□ 1.27
DDX39B-206ENST00000419338 ZNF777Q9ULD5 760 aaPredicted RBP22.97■■□□□ 1.27
DDX39B-206ENST00000419338 INO80Q9ULG1 1556 aaPredicted RBP22.96■■□□□ 1.27
DDX39B-206ENST00000419338 A2MP01023 1474 aa22.95■■□□□ 1.26
DDX39B-206ENST00000419338 MYO3AQ8NEV4 1616 aa22.95■■□□□ 1.26
DDX39B-206ENST00000419338 CLTCQ00610 1675 aaKnown RBP22.94■■□□□ 1.26
DDX39B-206ENST00000419338 HNRNPMP52272 730 aaKnown RBP eCLIP22.94■■□□□ 1.26
DDX39B-206ENST00000419338 NCKAP5LQ9HCH0 1330 aa22.93■■□□□ 1.26
DDX39B-206ENST00000419338 PPP6R1Q9UPN7 881 aa22.93■■□□□ 1.26
DDX39B-206ENST00000419338 CEP170BQ9Y4F5 1589 aaPredicted RBP22.93■■□□□ 1.26
DDX39B-206ENST00000419338 TCOF1Q13428 1488 aaKnown RBP22.92■■□□□ 1.26
DDX39B-206ENST00000419338 PTPRKQ15262 1439 aa22.92■■□□□ 1.26
DDX39B-206ENST00000419338 ZNF335Q9H4Z2 1342 aaPredicted RBP22.9■■□□□ 1.26
DDX39B-206ENST00000419338 CFDP1Q9UEE9 299 aaPredicted RBP22.9■■□□□ 1.26
DDX39B-206ENST00000419338 CCNB3Q8WWL7 1395 aa22.88■■□□□ 1.25
DDX39B-206ENST00000419338 ADGBQ8N7X0 1667 aa22.87■■□□□ 1.25
DDX39B-206ENST00000419338 UBAP1LF5GYI3 381 aa22.87■■□□□ 1.25
DDX39B-206ENST00000419338 GGT6Q6P531 493 aa22.86■■□□□ 1.25
DDX39B-206ENST00000419338 A2ML1A8K2U0 1454 aa22.83■■□□□ 1.25
DDX39B-206ENST00000419338 MTUS2Q5JR59 1369 aa22.82■■□□□ 1.24
DDX39B-206ENST00000419338 RTEL1-TNFRSF6BF6WH68 1400 aa22.81■■□□□ 1.24
DDX39B-206ENST00000419338 DNMT1P26358 1616 aaKnown RBP22.79■■□□□ 1.24
DDX39B-206ENST00000419338 MBD5Q9P267 1494 aa22.78■■□□□ 1.24
DDX39B-206ENST00000419338 FAM135AQ9P2D6 1515 aa22.77■■□□□ 1.24
DDX39B-206ENST00000419338 DHX29Q7Z478 1369 aaKnown RBP22.76■■□□□ 1.23
DDX39B-206ENST00000419338 TIAM1Q13009 1591 aa22.76■■□□□ 1.23
DDX39B-206ENST00000419338 CPS1P31327 1500 aa22.75■■□□□ 1.23
DDX39B-206ENST00000419338 EHBP1L1Q8N3D4 1523 aa22.74■■□□□ 1.23
DDX39B-206ENST00000419338 POLR1AO95602 1720 aaPredicted RBP22.74■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms