RNA–Protein interactions for RNA: ENST00000418381.5

UBR3-203, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene UBR3, Length 7,951 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-203ENST00000418381 HDGFP51858 240 aaKnown RBP22.68■■□□□ 1.22
UBR3-203ENST00000418381 FRAT2O75474 233 aaPredicted RBP22.67■■□□□ 1.22
UBR3-203ENST00000418381 CFDP1Q9UEE9 299 aaPredicted RBP22.65■■□□□ 1.22
UBR3-203ENST00000418381 GTF2E1P29083 439 aaPredicted RBP22.64■■□□□ 1.21
UBR3-203ENST00000418381 HSP90B1P14625 803 aaKnown RBP22.63■■□□□ 1.21
UBR3-203ENST00000418381 L1TD1Q5T7N2 865 aaKnown RBP22.63■■□□□ 1.21
UBR3-203ENST00000418381 MCCP23508 829 aa22.63■■□□□ 1.21
UBR3-203ENST00000418381 RASSF8Q8NHQ8 419 aa22.61■■□□□ 1.21
UBR3-203ENST00000418381 RAD21O60216 631 aa22.61■■□□□ 1.21
UBR3-203ENST00000418381 DCAF8L1A6NGE4 600 aa22.6■■□□□ 1.21
UBR3-203ENST00000418381 CWC22Q9HCG8 908 aaKnown RBP22.59■■□□□ 1.21
UBR3-203ENST00000418381 RTN4Q9NQC3 1192 aaKnown RBP22.58■■□□□ 1.21
UBR3-203ENST00000418381 KIAA1211Q6ZU35 1233 aa22.58■■□□□ 1.2
UBR3-203ENST00000418381 MARCH6O60337 910 aa22.56■■□□□ 1.2
UBR3-203ENST00000418381 GGT6Q6P531 493 aa22.54■■□□□ 1.2
UBR3-203ENST00000418381 CHMP4BQ9H444 224 aaKnown RBP22.54■■□□□ 1.2
UBR3-203ENST00000418381 KANK1Q14678 1352 aa22.53■■□□□ 1.2
UBR3-203ENST00000418381 FBXW7Q969H0 707 aa22.52■■□□□ 1.2
UBR3-203ENST00000418381 TCEAL9Q9UHQ7 104 aa22.52■■□□□ 1.2
UBR3-203ENST00000418381 CEP89Q96ST8 783 aa22.51■■□□□ 1.19
UBR3-203ENST00000418381 TOMM22Q9NS69 142 aa22.5■■□□□ 1.19
UBR3-203ENST00000418381 HSCBQ8IWL3 235 aa22.5■■□□□ 1.19
UBR3-203ENST00000418381 CTDP1Q9Y5B0 961 aaPredicted RBP22.5■■□□□ 1.19
UBR3-203ENST00000418381 EIF4G1Q04637 1599 aaKnown RBP22.49■■□□□ 1.19
UBR3-203ENST00000418381 EVA1CP58658 441 aa22.48■■□□□ 1.19
UBR3-203ENST00000418381 ARID3AQ99856 593 aa22.48■■□□□ 1.19
UBR3-203ENST00000418381 TRIM34Q9BYJ4 488 aa22.47■■□□□ 1.19
UBR3-203ENST00000418381 ZCCHC6Q5VYS8 1495 aaKnown RBP22.47■■□□□ 1.19
UBR3-203ENST00000418381 LTV1Q96GA3 475 aaPredicted RBP22.46■■□□□ 1.19
UBR3-203ENST00000418381 MORC1Q86VD1 984 aa22.45■■□□□ 1.18
UBR3-203ENST00000418381 RSF1Q96T23 1441 aaPredicted RBP22.44■■□□□ 1.18
UBR3-203ENST00000418381 NUTM2FA1L443 756 aa22.44■■□□□ 1.18
UBR3-203ENST00000418381 SUPT16HQ9Y5B9 1047 aaKnown RBP22.44■■□□□ 1.18
UBR3-203ENST00000418381 SAMD1Q6SPF0 538 aaPredicted RBP22.43■■□□□ 1.18
UBR3-203ENST00000418381 PES1O00541 588 aaKnown RBP22.42■■□□□ 1.18
UBR3-203ENST00000418381 MSNP26038 577 aaKnown RBP22.42■■□□□ 1.18
UBR3-203ENST00000418381 MS4A1P11836 297 aa22.41■■□□□ 1.18
UBR3-203ENST00000418381 B4GALNT3Q6L9W6 998 aa22.41■■□□□ 1.18
UBR3-203ENST00000418381 HDGFL2Q7Z4V5 671 aaPredicted RBP22.39■■□□□ 1.18
UBR3-203ENST00000418381 TRIM6-TRIM34B2RNG4 842 aa22.39■■□□□ 1.17
UBR3-203ENST00000418381 DCAF11Q8TEB1 546 aa22.39■■□□□ 1.17
UBR3-203ENST00000418381 GPATCH3Q96I76 525 aa22.36■■□□□ 1.17
UBR3-203ENST00000418381 SYTL4Q96C24 671 aaPredicted RBP22.36■■□□□ 1.17
UBR3-203ENST00000418381 NUTM2DQ5VT03 806 aaPredicted RBP22.35■■□□□ 1.17
UBR3-203ENST00000418381 TMF1P82094 1093 aa22.33■■□□□ 1.17
UBR3-203ENST00000418381 MIER1Q8N108 512 aa22.33■■□□□ 1.17
UBR3-203ENST00000418381 SLC4A10Q6U841 1118 aa22.33■■□□□ 1.17
UBR3-203ENST00000418381 PPP1R1BQ9UD71 204 aaPredicted RBP22.32■■□□□ 1.16
UBR3-203ENST00000418381 NOL8Q76FK4 1167 aaKnown RBP22.32■■□□□ 1.16
UBR3-203ENST00000418381 TPM4P67936 248 aa22.32■■□□□ 1.16
UBR3-203ENST00000418381 NGDNQ8NEJ9 315 aaKnown RBP22.32■■□□□ 1.16
UBR3-203ENST00000418381 SPAG9O60271 1321 aaKnown RBP22.31■■□□□ 1.16
UBR3-203ENST00000418381 EID1Q9Y6B2 187 aa22.29■■□□□ 1.16
UBR3-203ENST00000418381 NGEFQ8N5V2 710 aa22.29■■□□□ 1.16
UBR3-203ENST00000418381 ITPRIPQ8IWB1 547 aa22.28■■□□□ 1.16
UBR3-203ENST00000418381 PATL2C9JE40 543 aaKnown RBP22.25■■□□□ 1.15
UBR3-203ENST00000418381 AMPHP49418 695 aa22.25■■□□□ 1.15
UBR3-203ENST00000418381 TPD52L1Q16890 204 aaPredicted RBP22.24■■□□□ 1.15
UBR3-203ENST00000418381 NOL10Q9BSC4 688 aaKnown RBP22.23■■□□□ 1.15
UBR3-203ENST00000418381 STK31Q9BXU1 1019 aa22.23■■□□□ 1.15
UBR3-203ENST00000418381 GOLGA6L1Q8N7Z2 621 aa22.23■■□□□ 1.15
UBR3-203ENST00000418381 CCDC34Q96HJ3 373 aa22.22■■□□□ 1.15
UBR3-203ENST00000418381 GZF1Q9H116 711 aaPredicted RBP22.21■■□□□ 1.15
UBR3-203ENST00000418381 HTATSF1O43719 755 aaKnown RBP22.21■■□□□ 1.15
UBR3-203ENST00000418381 UTP3Q9NQZ2 479 aaKnown RBP eCLIP22.21■■□□□ 1.152e-6■■■■■ 122.4
UBR3-203ENST00000418381 U2AF1L5P0DN76 240 aaPredicted RBP22.2■■□□□ 1.14
UBR3-203ENST00000418381 U2AF1Q01081 240 aaKnown RBP eCLIP22.2■■□□□ 1.142e-6■■■■□ 19.7
UBR3-203ENST00000418381 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22.2■■□□□ 1.143e-7■■■■□ 23.6
UBR3-203ENST00000418381 CLIP1P30622 1438 aa22.19■■□□□ 1.14
UBR3-203ENST00000418381 VPS37DQ86XT2 251 aa22.18■■□□□ 1.14
UBR3-203ENST00000418381 DHX16O60231 1041 aaKnown RBP22.17■■□□□ 1.14
UBR3-203ENST00000418381 AMOTL1Q8IY63 956 aa22.17■■□□□ 1.14
UBR3-203ENST00000418381 FOXD4L5Q5VV16 416 aaPredicted RBP22.15■■□□□ 1.14
UBR3-203ENST00000418381 FOXD4L4Q8WXT5 416 aaPredicted RBP22.15■■□□□ 1.14
UBR3-203ENST00000418381 IPO8O15397 1037 aaKnown RBP22.15■■□□□ 1.14
UBR3-203ENST00000418381 CCNB3Q8WWL7 1395 aa22.15■■□□□ 1.14
UBR3-203ENST00000418381 AKAP17AQ02040 695 aaKnown RBP22.14■■□□□ 1.14
UBR3-203ENST00000418381 FOXD4L1Q9NU39 408 aa22.13■■□□□ 1.13
UBR3-203ENST00000418381 CCDC43Q96MW1 224 aaKnown RBP22.13■■□□□ 1.13
UBR3-203ENST00000418381 SF3A1Q15459 793 aaKnown RBP22.13■■□□□ 1.13
UBR3-203ENST00000418381 TPM3P06753 285 aa22.12■■□□□ 1.13
UBR3-203ENST00000418381 CCAR1Q8IX12 1150 aaKnown RBP22.11■■□□□ 1.13
UBR3-203ENST00000418381 CALD1Q05682 793 aaKnown RBP22.11■■□□□ 1.13
UBR3-203ENST00000418381 DCAF1Q9Y4B6 1507 aa22.1■■□□□ 1.13
UBR3-203ENST00000418381 CFAP44Q96MT7 982 aa22.09■■□□□ 1.13
UBR3-203ENST00000418381 C1orf141Q5JVX7 400 aa22.09■■□□□ 1.13
UBR3-203ENST00000418381 PCMTD1Q96MG8 357 aaPredicted RBP22.08■■□□□ 1.13
UBR3-203ENST00000418381 PAF1Q8N7H5 531 aa22.08■■□□□ 1.12
UBR3-203ENST00000418381 TSR1Q2NL82 804 aaKnown RBP22.07■■□□□ 1.12
UBR3-203ENST00000418381 SIN3AQ96ST3 1273 aa22.07■■□□□ 1.12
UBR3-203ENST00000418381 H3BQV1 296 aa22.06■■□□□ 1.12
UBR3-203ENST00000418381 IFFO2Q5TF58 517 aa22.06■■□□□ 1.12
UBR3-203ENST00000418381 TNNT3P45378 269 aaPredicted RBP22.06■■□□□ 1.12
UBR3-203ENST00000418381 NOP58Q9Y2X3 529 aaKnown RBP22.05■■□□□ 1.12
UBR3-203ENST00000418381 TPM2P07951 284 aa22.05■■□□□ 1.12
UBR3-203ENST00000418381 APPP05067 770 aa22.04■■□□□ 1.12
UBR3-203ENST00000418381 CCAR2Q8N163 923 aaKnown RBP22.04■■□□□ 1.12
UBR3-203ENST00000418381 SLC4A3P48751 1232 aa22.04■■□□□ 1.12
UBR3-203ENST00000418381 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP22.03■■□□□ 1.12
UBR3-203ENST00000418381 MFAP1P55081 439 aaKnown RBP22.03■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 8.3 ms