RNA–Protein interactions for RNA: ENST00000417608.1

ABCB4-204, Transcript of ATP binding cassette subfamily B member 4, humanhuman

TSL 1 (best)

Gene ABCB4, Length 2,007 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCB4-204ENST00000417608 CDK11AQ9UQ88 783 aaPredicted RBP16.29■□□□□ 0.2
ABCB4-204ENST00000417608 GTF3C3Q9Y5Q9 886 aa16.29■□□□□ 0.2
ABCB4-204ENST00000417608 GPATCH8Q9UKJ3 1502 aaKnown RBP16.29■□□□□ 0.2
ABCB4-204ENST00000417608 TONSLQ96HA7 1378 aa16.28■□□□□ 0.2
ABCB4-204ENST00000417608 CAMSAP2Q08AD1 1489 aa16.27■□□□□ 0.2
ABCB4-204ENST00000417608 ROCK1Q13464 1354 aa16.27■□□□□ 0.2
ABCB4-204ENST00000417608 CHD1O14646 1710 aa16.27■□□□□ 0.2
ABCB4-204ENST00000417608 ITSN2Q9NZM3 1697 aa16.27■□□□□ 0.19
ABCB4-204ENST00000417608 HIRIP3Q9BW71 556 aaPredicted RBP16.26■□□□□ 0.19
ABCB4-204ENST00000417608 ATP10BO94823 1461 aa16.26■□□□□ 0.19
ABCB4-204ENST00000417608 TRIM52Q96A61 297 aa16.24■□□□□ 0.19
ABCB4-204ENST00000417608 MPHOSPH9Q99550 1183 aa16.23■□□□□ 0.19
ABCB4-204ENST00000417608 CDC42BPAQ5VT25 1732 aa16.22■□□□□ 0.19
ABCB4-204ENST00000417608 CFDP1Q9UEE9 299 aaPredicted RBP16.22■□□□□ 0.19
ABCB4-204ENST00000417608 ABCC10Q5T3U5 1492 aa16.22■□□□□ 0.19
ABCB4-204ENST00000417608 CROCC2H7BZ55 1655 aa16.21■□□□□ 0.19
ABCB4-204ENST00000417608 FOXD1Q16676 465 aa16.21■□□□□ 0.19
ABCB4-204ENST00000417608 ADGBQ8N7X0 1667 aa16.19■□□□□ 0.18
ABCB4-204ENST00000417608 DDX10Q13206 875 aaKnown RBP16.19■□□□□ 0.18
ABCB4-204ENST00000417608 SHROOM2Q13796 1616 aa16.18■□□□□ 0.18
ABCB4-204ENST00000417608 ZNF777Q9ULD5 760 aaPredicted RBP16.18■□□□□ 0.18
ABCB4-204ENST00000417608 NCOA1Q15788 1441 aa16.17■□□□□ 0.18
ABCB4-204ENST00000417608 KCNH8Q96L42 1107 aa16.17■□□□□ 0.18
ABCB4-204ENST00000417608 PTPRGP23470 1445 aa16.17■□□□□ 0.18
ABCB4-204ENST00000417608 ADGRL2O95490 1459 aa16.16■□□□□ 0.18
ABCB4-204ENST00000417608 ERCC6L2Q5T890 1561 aa16.16■□□□□ 0.18
ABCB4-204ENST00000417608 PLEKHD1A6NEE1 506 aa16.16■□□□□ 0.18
ABCB4-204ENST00000417608 ANKRD30BQ9BXX2 1392 aa16.15■□□□□ 0.18
ABCB4-204ENST00000417608 PZPP20742 1482 aa16.14■□□□□ 0.17
ABCB4-204ENST00000417608 RPRD2Q5VT52 1461 aaKnown RBP16.11■□□□□ 0.17
ABCB4-204ENST00000417608 L3MBTL2Q969R5 705 aa16.1■□□□□ 0.17
ABCB4-204ENST00000417608 TEX14Q8IWB6 1497 aa16.1■□□□□ 0.17
ABCB4-204ENST00000417608 CDC42BPBQ9Y5S2 1711 aa16.09■□□□□ 0.17
ABCB4-204ENST00000417608 SLC4A1APQ9BWU0 796 aaKnown RBP16.09■□□□□ 0.17
ABCB4-204ENST00000417608 SHANK2Q9UPX8 1470 aa16.08■□□□□ 0.16
ABCB4-204ENST00000417608 ANKRD30AQ9BXX3 1397 aa16.07■□□□□ 0.16
ABCB4-204ENST00000417608 C9orf84Q5VXU9 1444 aa16.07■□□□□ 0.16
ABCB4-204ENST00000417608 SAMD9LQ8IVG5 1584 aa16.07■□□□□ 0.16
ABCB4-204ENST00000417608 MBD5Q9P267 1494 aa16.06■□□□□ 0.16
ABCB4-204ENST00000417608 PREX2Q70Z35 1606 aa16.06■□□□□ 0.16
ABCB4-204ENST00000417608 TTC37Q6PGP7 1564 aa16.05■□□□□ 0.16
ABCB4-204ENST00000417608 ANKRD50Q9ULJ7 1429 aa16.05■□□□□ 0.16
ABCB4-204ENST00000417608 ARHGEF5Q12774 1597 aa16.04■□□□□ 0.16
ABCB4-204ENST00000417608 CLASP1Q7Z460 1538 aa16.04■□□□□ 0.16
ABCB4-204ENST00000417608 NBPF8Q3BBV2 869 aa16.04■□□□□ 0.16
ABCB4-204ENST00000417608 ABCC2Q92887 1545 aa16.03■□□□□ 0.16
ABCB4-204ENST00000417608 HSPA5P11021 654 aaKnown RBP16.03■□□□□ 0.16
ABCB4-204ENST00000417608 HNRNPMP52272 730 aaKnown RBP eCLIP16.03■□□□□ 0.16
ABCB4-204ENST00000417608 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.02■□□□□ 0.15
ABCB4-204ENST00000417608 KIAA1107Q9UPP5 1409 aa16.01■□□□□ 0.15
ABCB4-204ENST00000417608 WASHC2AQ641Q2 1341 aa16■□□□□ 0.15
ABCB4-204ENST00000417608 PKD2Q13563 968 aa15.98■□□□□ 0.15
ABCB4-204ENST00000417608 KIF15Q9NS87 1388 aa15.98■□□□□ 0.15
ABCB4-204ENST00000417608 SYCP2Q9BX26 1530 aa15.98■□□□□ 0.15
ABCB4-204ENST00000417608 CCDC141Q6ZP82 1450 aa15.97■□□□□ 0.15
ABCB4-204ENST00000417608 KDM5DQ9BY66 1539 aa15.97■□□□□ 0.15
ABCB4-204ENST00000417608 EIF4G2P78344 907 aaKnown RBP eCLIP15.96■□□□□ 0.15
ABCB4-204ENST00000417608 NUP155O75694 1391 aa15.96■□□□□ 0.14
ABCB4-204ENST00000417608 C11orf95C9JLR9 678 aaPredicted RBP15.95■□□□□ 0.14
ABCB4-204ENST00000417608 TSPY4P0CV99 314 aa15.95■□□□□ 0.14
ABCB4-204ENST00000417608 TSPY10P0CW01 314 aa15.95■□□□□ 0.14
ABCB4-204ENST00000417608 ZCCHC11Q5TAX3 1644 aaKnown RBP15.95■□□□□ 0.14
ABCB4-204ENST00000417608 ARHGAP5Q13017 1502 aa15.95■□□□□ 0.14
ABCB4-204ENST00000417608 ANP32CO43423 234 aa15.95■□□□□ 0.14
ABCB4-204ENST00000417608 MYO5CQ9NQX4 1742 aa15.94■□□□□ 0.14
ABCB4-204ENST00000417608 SPATA31E1Q6ZUB1 1445 aa15.94■□□□□ 0.14
ABCB4-204ENST00000417608 CCER2I3L3R5 266 aa15.94■□□□□ 0.14
ABCB4-204ENST00000417608 ARHGEF12Q9NZN5 1544 aa15.91■□□□□ 0.14
ABCB4-204ENST00000417608 MAST1Q9Y2H9 1570 aa15.91■□□□□ 0.14
ABCB4-204ENST00000417608 UHRF1BP1LA0JNW5 1464 aa15.9■□□□□ 0.14
ABCB4-204ENST00000417608 CCDC7Q96M83 1385 aa15.89■□□□□ 0.13
ABCB4-204ENST00000417608 FAM135AQ9P2D6 1515 aa15.88■□□□□ 0.13
ABCB4-204ENST00000417608 CNTLNQ9NXG0 1405 aa15.87■□□□□ 0.13
ABCB4-204ENST00000417608 POLR1AO95602 1720 aaPredicted RBP15.87■□□□□ 0.13
ABCB4-204ENST00000417608 RSPH4AQ5TD94 716 aa15.86■□□□□ 0.13
ABCB4-204ENST00000417608 UNC13BO14795 1591 aa15.86■□□□□ 0.13
ABCB4-204ENST00000417608 PLXNC1O60486 1568 aa15.86■□□□□ 0.13
ABCB4-204ENST00000417608 PLCH2O75038 1416 aa15.85■□□□□ 0.13
ABCB4-204ENST00000417608 BCORL1Q5H9F3 1711 aa15.84■□□□□ 0.13
ABCB4-204ENST00000417608 KIF7Q2M1P5 1343 aa15.83■□□□□ 0.12
ABCB4-204ENST00000417608 UHRF1BP1Q6BDS2 1440 aa15.83■□□□□ 0.12
ABCB4-204ENST00000417608 ZNF326Q5BKZ1 582 aaKnown RBP15.83■□□□□ 0.12
ABCB4-204ENST00000417608 SUPT16HQ9Y5B9 1047 aaKnown RBP15.83■□□□□ 0.12
ABCB4-204ENST00000417608 PLEKHH2Q8IVE3 1493 aa15.83■□□□□ 0.12
ABCB4-204ENST00000417608 KDM5CP41229 1560 aa15.83■□□□□ 0.12
ABCB4-204ENST00000417608 ABCC1P33527 1531 aa15.82■□□□□ 0.12
ABCB4-204ENST00000417608 USP47Q96K76 1375 aa15.8■□□□□ 0.12
ABCB4-204ENST00000417608 TRAPPC8Q9Y2L5 1435 aa15.8■□□□□ 0.12
ABCB4-204ENST00000417608 PLA2R1Q13018 1463 aa15.8■□□□□ 0.12
ABCB4-204ENST00000417608 RALGAPBQ86X10 1494 aa15.8■□□□□ 0.12
ABCB4-204ENST00000417608 IQGAP3Q86VI3 1631 aa15.79■□□□□ 0.12
ABCB4-204ENST00000417608 CCDC184Q52MB2 194 aa15.78■□□□□ 0.12
ABCB4-204ENST00000417608 DUOX2Q9NRD8 1548 aa15.78■□□□□ 0.12
ABCB4-204ENST00000417608 MAGI2Q86UL8 1455 aa15.77■□□□□ 0.12
ABCB4-204ENST00000417608 EFCAB2Q5VUJ9 269 aa15.76■□□□□ 0.11
ABCB4-204ENST00000417608 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.75■□□□□ 0.11
ABCB4-204ENST00000417608 PRKRIP1Q9H875 184 aaPredicted RBP15.75■□□□□ 0.11
ABCB4-204ENST00000417608 ERBINQ96RT1 1412 aa15.75■□□□□ 0.11
ABCB4-204ENST00000417608 WDR7Q9Y4E6 1490 aa15.75■□□□□ 0.11
ABCB4-204ENST00000417608 KDM2AQ9Y2K7 1162 aa15.74■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms