RNA–Protein interactions for RNA: ENST00000416426.6

MSI2-203, Transcript of musashi RNA binding protein 2, humanhuman

TSL 2 BASIC

Gene MSI2, Length 1,714 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSI2-203ENST00000416426 ABCC5O15440 1437 aa26.65■■□□□ 1.86
MSI2-203ENST00000416426 CAMSAP2Q08AD1 1489 aa26.64■■□□□ 1.86
MSI2-203ENST00000416426 CDC42BPAQ5VT25 1732 aa26.64■■□□□ 1.85
MSI2-203ENST00000416426 ABCC2Q92887 1545 aa26.62■■□□□ 1.85
MSI2-203ENST00000416426 DIEXFQ68CQ4 756 aaKnown RBP26.6■■□□□ 1.85
MSI2-203ENST00000416426 ZNF644Q9H582 1327 aaPredicted RBP26.6■■□□□ 1.85
MSI2-203ENST00000416426 CFDP1Q9UEE9 299 aaPredicted RBP26.59■■□□□ 1.85
MSI2-203ENST00000416426 CHIC2Q9UKJ5 165 aa26.59■■□□□ 1.85
MSI2-203ENST00000416426 RRP7BPQ9NSQ0 103 aa26.58■■□□□ 1.85
MSI2-203ENST00000416426 TIMELESSQ9UNS1 1208 aa26.58■■□□□ 1.85
MSI2-203ENST00000416426 KDM6BO15054 1643 aa26.57■■□□□ 1.84
MSI2-203ENST00000416426 CROCC2H7BZ55 1655 aa26.57■■□□□ 1.84
MSI2-203ENST00000416426 ADGBQ8N7X0 1667 aa26.54■■□□□ 1.84
MSI2-203ENST00000416426 ACIN1Q9UKV3 1341 aaKnown RBP26.54■■□□□ 1.84
MSI2-203ENST00000416426 CYB5RLQ6IPT4 315 aa26.53■■□□□ 1.84
MSI2-203ENST00000416426 UHRF1BP1LA0JNW5 1464 aa26.53■■□□□ 1.84
MSI2-203ENST00000416426 SIN3AQ96ST3 1273 aa26.51■■□□□ 1.83
MSI2-203ENST00000416426 ADGRL2O95490 1459 aa26.51■■□□□ 1.83
MSI2-203ENST00000416426 PREX2Q70Z35 1606 aa26.47■■□□□ 1.83
MSI2-203ENST00000416426 DENND4BO75064 1496 aaPredicted RBP26.46■■□□□ 1.83
MSI2-203ENST00000416426 SHANK2Q9UPX8 1470 aa26.44■■□□□ 1.82
MSI2-203ENST00000416426 CDC42BPBQ9Y5S2 1711 aa26.44■■□□□ 1.82
MSI2-203ENST00000416426 NCOA1Q15788 1441 aa26.43■■□□□ 1.82
MSI2-203ENST00000416426 ZCCHC11Q5TAX3 1644 aaKnown RBP26.43■■□□□ 1.82
MSI2-203ENST00000416426 KDM5BQ9UGL1 1544 aa26.42■■□□□ 1.82
MSI2-203ENST00000416426 NEUROD1Q13562 356 aa26.42■■□□□ 1.82
MSI2-203ENST00000416426 ARHGEF5Q12774 1597 aa26.42■■□□□ 1.82
MSI2-203ENST00000416426 ZNF777Q9ULD5 760 aaPredicted RBP26.41■■□□□ 1.82
MSI2-203ENST00000416426 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP26.39■■□□□ 1.822e-6■■□□□ 12.3
MSI2-203ENST00000416426 TTC37Q6PGP7 1564 aa26.39■■□□□ 1.81
MSI2-203ENST00000416426 SAMD9LQ8IVG5 1584 aa26.38■■□□□ 1.81
MSI2-203ENST00000416426 ANKRD30AQ9BXX3 1397 aa26.36■■□□□ 1.81
MSI2-203ENST00000416426 TRIM52Q96A61 297 aa26.36■■□□□ 1.81
MSI2-203ENST00000416426 MBD5Q9P267 1494 aa26.35■■□□□ 1.81
MSI2-203ENST00000416426 MPHOSPH9Q99550 1183 aa26.34■■□□□ 1.81
MSI2-203ENST00000416426 MYO5CQ9NQX4 1742 aa26.34■■□□□ 1.81
MSI2-203ENST00000416426 PPP1R15AO75807 674 aaPredicted RBP26.34■■□□□ 1.81
MSI2-203ENST00000416426 C9orf84Q5VXU9 1444 aa26.32■■□□□ 1.8
MSI2-203ENST00000416426 TONSLQ96HA7 1378 aa26.3■■□□□ 1.8
MSI2-203ENST00000416426 CCDC141Q6ZP82 1450 aa26.28■■□□□ 1.8
MSI2-203ENST00000416426 ARHGAP5Q13017 1502 aa26.26■■□□□ 1.79
MSI2-203ENST00000416426 RSPH4AQ5TD94 716 aa26.26■■□□□ 1.79
MSI2-203ENST00000416426 PZPP20742 1482 aa26.25■■□□□ 1.79
MSI2-203ENST00000416426 MAST1Q9Y2H9 1570 aa26.25■■□□□ 1.79
MSI2-203ENST00000416426 PLEKHH2Q8IVE3 1493 aa26.24■■□□□ 1.79
MSI2-203ENST00000416426 ANKRD50Q9ULJ7 1429 aa26.23■■□□□ 1.79
MSI2-203ENST00000416426 KIAA1107Q9UPP5 1409 aa26.23■■□□□ 1.79
MSI2-203ENST00000416426 TSPY4P0CV99 314 aa26.22■■□□□ 1.79
MSI2-203ENST00000416426 TSPY10P0CW01 314 aa26.22■■□□□ 1.79
MSI2-203ENST00000416426 HNRNPMP52272 730 aaKnown RBP eCLIP26.22■■□□□ 1.797e-7■■■■□ 25.9
MSI2-203ENST00000416426 ANKRD30BQ9BXX2 1392 aa26.22■■□□□ 1.79
MSI2-203ENST00000416426 PLCH2O75038 1416 aa26.21■■□□□ 1.79
MSI2-203ENST00000416426 SYCP2Q9BX26 1530 aa26.21■■□□□ 1.79
MSI2-203ENST00000416426 KDM5DQ9BY66 1539 aa26.18■■□□□ 1.78
MSI2-203ENST00000416426 ARAP3Q8WWN8 1544 aa26.18■■□□□ 1.78
MSI2-203ENST00000416426 SLC4A1APQ9BWU0 796 aaKnown RBP26.16■■□□□ 1.78
MSI2-203ENST00000416426 KIF15Q9NS87 1388 aa26.15■■□□□ 1.78
MSI2-203ENST00000416426 RPRD2Q5VT52 1461 aaKnown RBP26.15■■□□□ 1.78
MSI2-203ENST00000416426 KCNH8Q96L42 1107 aa26.15■■□□□ 1.78
MSI2-203ENST00000416426 WDR7Q9Y4E6 1490 aa26.14■■□□□ 1.77
MSI2-203ENST00000416426 MIER1Q8N108 512 aa26.13■■□□□ 1.77
MSI2-203ENST00000416426 PLXNC1O60486 1568 aa26.12■■□□□ 1.77
MSI2-203ENST00000416426 ARHGEF12Q9NZN5 1544 aa26.11■■□□□ 1.77
MSI2-203ENST00000416426 FOXD1Q16676 465 aa26.11■■□□□ 1.77
MSI2-203ENST00000416426 ABCC1P33527 1531 aa26.1■■□□□ 1.77
MSI2-203ENST00000416426 EFCAB2Q5VUJ9 269 aa26.08■■□□□ 1.77
MSI2-203ENST00000416426 ABCA9Q8IUA7 1624 aa26.07■■□□□ 1.76
MSI2-203ENST00000416426 TRHP20396 242 aaPredicted RBP26.06■■□□□ 1.76
MSI2-203ENST00000416426 TEX14Q8IWB6 1497 aa26.05■■□□□ 1.76
MSI2-203ENST00000416426 NUP155O75694 1391 aa26.02■■□□□ 1.76
MSI2-203ENST00000416426 UNC13BO14795 1591 aa26.02■■□□□ 1.76
MSI2-203ENST00000416426 L3MBTL2Q969R5 705 aa26■■□□□ 1.75
MSI2-203ENST00000416426 ASXL2Q76L83 1435 aa26■■□□□ 1.75
MSI2-203ENST00000416426 PKD2Q13563 968 aa26■■□□□ 1.75
MSI2-203ENST00000416426 DUOX2Q9NRD8 1548 aa25.99■■□□□ 1.75
MSI2-203ENST00000416426 TRAPPC8Q9Y2L5 1435 aa25.96■■□□□ 1.75
MSI2-203ENST00000416426 FAM135AQ9P2D6 1515 aa25.94■■□□□ 1.74
MSI2-203ENST00000416426 RTEL1-TNFRSF6BF6WH68 1400 aa25.93■■□□□ 1.74
MSI2-203ENST00000416426 ERBINQ96RT1 1412 aa25.93■■□□□ 1.74
MSI2-203ENST00000416426 FANCAO15360 1455 aa25.91■■□□□ 1.74
MSI2-203ENST00000416426 MAGI2Q86UL8 1455 aa25.91■■□□□ 1.74
MSI2-203ENST00000416426 IQGAP3Q86VI3 1631 aa25.91■■□□□ 1.74
MSI2-203ENST00000416426 ZFYVE16Q7Z3T8 1539 aa25.88■■□□□ 1.73
MSI2-203ENST00000416426 NPM1P06748 294 aaKnown RBP eCLIP25.86■■□□□ 1.73
MSI2-203ENST00000416426 INO80Q9ULG1 1556 aaPredicted RBP25.85■■□□□ 1.73
MSI2-203ENST00000416426 CENPBP07199 599 aaPredicted RBP25.84■■□□□ 1.73
MSI2-203ENST00000416426 HIRIP3Q9BW71 556 aaPredicted RBP25.84■■□□□ 1.73
MSI2-203ENST00000416426 NBPF8Q3BBV2 869 aa25.83■■□□□ 1.73
MSI2-203ENST00000416426 SPAG9O60271 1321 aaKnown RBP25.83■■□□□ 1.72
MSI2-203ENST00000416426 ADGRL1O94910 1474 aa25.81■■□□□ 1.72
MSI2-203ENST00000416426 DDX10Q13206 875 aaKnown RBP25.8■■□□□ 1.72
MSI2-203ENST00000416426 ATP7AQ04656 1500 aa25.79■■□□□ 1.72
MSI2-203ENST00000416426 CFAP74Q9C0B2 1584 aa25.78■■□□□ 1.72
MSI2-203ENST00000416426 HSPA5P11021 654 aaKnown RBP25.78■■□□□ 1.72
MSI2-203ENST00000416426 EIF4G2P78344 907 aaKnown RBP eCLIP25.78■■□□□ 1.721e-6■■■■■ 30.9
MSI2-203ENST00000416426 AFAP1Q8N556 730 aa25.78■■□□□ 1.72
MSI2-203ENST00000416426 UHRF1BP1Q6BDS2 1440 aa25.77■■□□□ 1.72
MSI2-203ENST00000416426 SCAPERQ9BY12 1400 aa25.77■■□□□ 1.72
MSI2-203ENST00000416426 DEPDC5O75140 1603 aa25.75■■□□□ 1.71
MSI2-203ENST00000416426 ATP10AO60312 1499 aa25.74■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms