RNA–Protein interactions for RNA: ENST00000415758.1

DDX56-202, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 1,287 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-202ENST00000415758 CDK11AQ9UQ88 783 aaPredicted RBP25.6■■□□□ 1.69
DDX56-202ENST00000415758 UBTFP17480 764 aaKnown RBP25.59■■□□□ 1.69
DDX56-202ENST00000415758 ATP10AO60312 1499 aa25.59■■□□□ 1.69
DDX56-202ENST00000415758 HSPA2P54652 639 aa25.58■■□□□ 1.69
DDX56-202ENST00000415758 ARHGAP35Q9NRY4 1499 aa25.58■■□□□ 1.69
DDX56-202ENST00000415758 MYO5CQ9NQX4 1742 aa25.57■■□□□ 1.68
DDX56-202ENST00000415758 FER1L4A9Z1Z3 1794 aa25.56■■□□□ 1.68
DDX56-202ENST00000415758 MLECQ14165 292 aa25.55■■□□□ 1.68
DDX56-202ENST00000415758 ATP1B4Q9UN42 357 aaPredicted RBP25.55■■□□□ 1.68
DDX56-202ENST00000415758 ARHGEF12Q9NZN5 1544 aa25.54■■□□□ 1.68
DDX56-202ENST00000415758 C9orf84Q5VXU9 1444 aa25.54■■□□□ 1.68
DDX56-202ENST00000415758 PLPPR3Q6T4P5 718 aa25.53■■□□□ 1.68
DDX56-202ENST00000415758 TROQ12816 1431 aaPredicted RBP25.51■■□□□ 1.67
DDX56-202ENST00000415758 KIF14Q15058 1648 aa25.51■■□□□ 1.67
DDX56-202ENST00000415758 ZNF518AQ6AHZ1 1483 aa25.5■■□□□ 1.67
DDX56-202ENST00000415758 EHMT2Q96KQ7 1210 aa25.48■■□□□ 1.67
DDX56-202ENST00000415758 KDM5CP41229 1560 aa25.47■■□□□ 1.67
DDX56-202ENST00000415758 AFAP1Q8N556 730 aa25.46■■□□□ 1.67
DDX56-202ENST00000415758 CLIP1P30622 1438 aa25.46■■□□□ 1.67
DDX56-202ENST00000415758 ARHGAP5Q13017 1502 aa25.45■■□□□ 1.66
DDX56-202ENST00000415758 LRRIQ1Q96JM4 1722 aa25.43■■□□□ 1.66
DDX56-202ENST00000415758 PREX1Q8TCU6 1659 aa25.42■■□□□ 1.66
DDX56-202ENST00000415758 CERKQ8TCT0 537 aa25.42■■□□□ 1.66
DDX56-202ENST00000415758 CHIC1Q5VXU3 224 aa25.41■■□□□ 1.66
DDX56-202ENST00000415758 REREQ9P2R6 1566 aa25.4■■□□□ 1.66
DDX56-202ENST00000415758 CEBPAP49715 358 aaPredicted RBP25.4■■□□□ 1.66
DDX56-202ENST00000415758 SETD1BQ9UPS6 1966 aaKnown RBP25.39■■□□□ 1.66
DDX56-202ENST00000415758 CDC42BPBQ9Y5S2 1711 aa25.39■■□□□ 1.65
DDX56-202ENST00000415758 MLH3Q9UHC1 1453 aa25.39■■□□□ 1.65
DDX56-202ENST00000415758 DIP2CQ9Y2E4 1556 aa25.37■■□□□ 1.65
DDX56-202ENST00000415758 CASKIN1Q8WXD9 1431 aa25.33■■□□□ 1.65
DDX56-202ENST00000415758 MYT1LQ9UL68 1186 aa25.33■■□□□ 1.65
DDX56-202ENST00000415758 DMRT2Q9Y5R5 561 aa25.33■■□□□ 1.65
DDX56-202ENST00000415758 PREX2Q70Z35 1606 aa25.33■■□□□ 1.65
DDX56-202ENST00000415758 CCDC18Q5T9S5 1454 aa25.32■■□□□ 1.64
DDX56-202ENST00000415758 AGLP35573 1532 aa25.32■■□□□ 1.64
DDX56-202ENST00000415758 STRCQ7RTU9 1775 aa25.31■■□□□ 1.64
DDX56-202ENST00000415758 ABCA6Q8N139 1617 aa25.31■■□□□ 1.64
DDX56-202ENST00000415758 ABCC1P33527 1531 aa25.31■■□□□ 1.64
DDX56-202ENST00000415758 UHRF1BP1Q6BDS2 1440 aa25.3■■□□□ 1.64
DDX56-202ENST00000415758 TRAPPC8Q9Y2L5 1435 aa25.3■■□□□ 1.64
DDX56-202ENST00000415758 ITSN2Q9NZM3 1697 aa25.26■■□□□ 1.63
DDX56-202ENST00000415758 C3P01024 1663 aa25.26■■□□□ 1.63
DDX56-202ENST00000415758 KIDINS220Q9ULH0 1771 aa25.24■■□□□ 1.63
DDX56-202ENST00000415758 CDC42BPAQ5VT25 1732 aa25.23■■□□□ 1.63
DDX56-202ENST00000415758 ESF1Q9H501 851 aaKnown RBP25.21■■□□□ 1.63
DDX56-202ENST00000415758 FYCO1Q9BQS8 1478 aa25.2■■□□□ 1.62
DDX56-202ENST00000415758 PTPRTO14522 1441 aa25.2■■□□□ 1.62
DDX56-202ENST00000415758 CNTLNQ9NXG0 1405 aa25.2■■□□□ 1.62
DDX56-202ENST00000415758 SAMD9LQ8IVG5 1584 aa25.16■■□□□ 1.62
DDX56-202ENST00000415758 GPATCH8Q9UKJ3 1502 aaKnown RBP25.14■■□□□ 1.62
DDX56-202ENST00000415758 ZNF777Q9ULD5 760 aaPredicted RBP25.11■■□□□ 1.61
DDX56-202ENST00000415758 NPATQ14207 1427 aa25.11■■□□□ 1.61
DDX56-202ENST00000415758 SPAG9O60271 1321 aaKnown RBP25.11■■□□□ 1.61
DDX56-202ENST00000415758 MROH2AA6NES4 1674 aa25.1■■□□□ 1.61
DDX56-202ENST00000415758 KIAA1107Q9UPP5 1409 aa25.1■■□□□ 1.61
DDX56-202ENST00000415758 SYCP2Q9BX26 1530 aa25.09■■□□□ 1.61
DDX56-202ENST00000415758 HNRNPMP52272 730 aaKnown RBP eCLIP25.09■■□□□ 1.61
DDX56-202ENST00000415758 NCOA1Q15788 1441 aa25.09■■□□□ 1.61
DDX56-202ENST00000415758 ZMYM3Q14202 1370 aa25.07■■□□□ 1.6
DDX56-202ENST00000415758 LTBP4Q8N2S1 1624 aa25.06■■□□□ 1.6
DDX56-202ENST00000415758 PLEKHH2Q8IVE3 1493 aa25.06■■□□□ 1.6
DDX56-202ENST00000415758 CFDP1Q9UEE9 299 aaPredicted RBP25.05■■□□□ 1.6
DDX56-202ENST00000415758 ATP7AQ04656 1500 aa25.04■■□□□ 1.6
DDX56-202ENST00000415758 SUPT6HQ7KZ85 1726 aaKnown RBP25.03■■□□□ 1.6
DDX56-202ENST00000415758 IQSEC2Q5JU85 1478 aa25.02■■□□□ 1.6
DDX56-202ENST00000415758 PLXNC1O60486 1568 aa25.02■■□□□ 1.6
DDX56-202ENST00000415758 INO80Q9ULG1 1556 aaPredicted RBP25.01■■□□□ 1.59
DDX56-202ENST00000415758 CCNB3Q8WWL7 1395 aa25.01■■□□□ 1.59
DDX56-202ENST00000415758 A2MP01023 1474 aa25.01■■□□□ 1.59
DDX56-202ENST00000415758 CAMSAP1Q5T5Y3 1602 aa25.01■■□□□ 1.59
DDX56-202ENST00000415758 PPP6R1Q9UPN7 881 aa24.98■■□□□ 1.59
DDX56-202ENST00000415758 CLTCQ00610 1675 aaKnown RBP24.97■■□□□ 1.59
DDX56-202ENST00000415758 MTUS2Q5JR59 1369 aa24.96■■□□□ 1.59
DDX56-202ENST00000415758 DISP3Q9P2K9 1392 aa24.96■■□□□ 1.59
DDX56-202ENST00000415758 PTPRKQ15262 1439 aa24.94■■□□□ 1.58
DDX56-202ENST00000415758 GGT6Q6P531 493 aa24.93■■□□□ 1.58
DDX56-202ENST00000415758 PLA2R1Q13018 1463 aa24.93■■□□□ 1.58
DDX56-202ENST00000415758 ZNF142P52746 1687 aaPredicted RBP24.93■■□□□ 1.58
DDX56-202ENST00000415758 ADGBQ8N7X0 1667 aa24.92■■□□□ 1.58
DDX56-202ENST00000415758 PKD2Q13563 968 aa24.92■■□□□ 1.58
DDX56-202ENST00000415758 NCKAP5LQ9HCH0 1330 aa24.91■■□□□ 1.58
DDX56-202ENST00000415758 MBD5Q9P267 1494 aa24.91■■□□□ 1.58
DDX56-202ENST00000415758 ILDR2Q71H61 639 aa24.91■■□□□ 1.58
DDX56-202ENST00000415758 MYO3AQ8NEV4 1616 aa24.9■■□□□ 1.58
DDX56-202ENST00000415758 ZNF644Q9H582 1327 aaPredicted RBP24.89■■□□□ 1.58
DDX56-202ENST00000415758 RTEL1-TNFRSF6BF6WH68 1400 aa24.89■■□□□ 1.58
DDX56-202ENST00000415758 TCOF1Q13428 1488 aaKnown RBP24.89■■□□□ 1.57
DDX56-202ENST00000415758 TIAM1Q13009 1591 aa24.88■■□□□ 1.57
DDX56-202ENST00000415758 CEP170BQ9Y4F5 1589 aaPredicted RBP24.88■■□□□ 1.57
DDX56-202ENST00000415758 EHBP1L1Q8N3D4 1523 aa24.86■■□□□ 1.57
DDX56-202ENST00000415758 ZNF335Q9H4Z2 1342 aaPredicted RBP24.86■■□□□ 1.57
DDX56-202ENST00000415758 CEP162Q5TB80 1403 aa24.85■■□□□ 1.57
DDX56-202ENST00000415758 DHX29Q7Z478 1369 aaKnown RBP24.84■■□□□ 1.57
DDX56-202ENST00000415758 SOCS7O14512 581 aa24.84■■□□□ 1.57
DDX56-202ENST00000415758 SPATA31D1Q6ZQQ2 1576 aa24.81■■□□□ 1.56
DDX56-202ENST00000415758 A2ML1A8K2U0 1454 aa24.8■■□□□ 1.56
DDX56-202ENST00000415758 RSPH4AQ5TD94 716 aa24.78■■□□□ 1.56
DDX56-202ENST00000415758 DNMT1P26358 1616 aaKnown RBP24.78■■□□□ 1.56
DDX56-202ENST00000415758 FAM135AQ9P2D6 1515 aa24.76■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 149.3 ms