RNA–Protein interactions for RNA: ENST00000415055.2

PTPRK-210, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 5

Gene PTPRK, Length 782 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-210ENST00000415055 NACADO15069 1562 aa9.83□□□□□ -0.84
PTPRK-210ENST00000415055 ZNF710Q8N1W2 664 aa9.82□□□□□ -0.84
PTPRK-210ENST00000415055 PKD2Q13563 968 aa9.81□□□□□ -0.84
PTPRK-210ENST00000415055 FAM205CA6NFA0 338 aa9.8□□□□□ -0.84
PTPRK-210ENST00000415055 STK25O00506 426 aa9.8□□□□□ -0.84
PTPRK-210ENST00000415055 TMEM92Q6UXU6 159 aa9.8□□□□□ -0.84
PTPRK-210ENST00000415055 HS3ST6Q96QI5 342 aa9.8□□□□□ -0.84
PTPRK-210ENST00000415055 FBXO22Q8NEZ5 403 aa9.79□□□□□ -0.84
PTPRK-210ENST00000415055 HOXB1P14653 301 aaPredicted RBP9.78□□□□□ -0.84
PTPRK-210ENST00000415055 POTEB3A0JP26 581 aa9.77□□□□□ -0.85
PTPRK-210ENST00000415055 RIMBP2O15034 1052 aa9.77□□□□□ -0.85
PTPRK-210ENST00000415055 RGL2O15211 777 aa9.77□□□□□ -0.85
PTPRK-210ENST00000415055 POTEBQ6S5H4 581 aa9.77□□□□□ -0.85
PTPRK-210ENST00000415055 SPNS2Q8IVW8 549 aa9.76□□□□□ -0.85
PTPRK-210ENST00000415055 MFRPQ9BY79 579 aa9.76□□□□□ -0.85
PTPRK-210ENST00000415055 ZSWIM6Q9HCJ5 1215 aa9.73□□□□□ -0.85
PTPRK-210ENST00000415055 MMRN1Q13201 1228 aa9.72□□□□□ -0.85
PTPRK-210ENST00000415055 KRTAP3-3Q9BYR6 98 aa9.71□□□□□ -0.86
PTPRK-210ENST00000415055 KRTAP3-2Q9BYR7 98 aa9.71□□□□□ -0.86
PTPRK-210ENST00000415055 ERBB3P21860 1342 aa9.71□□□□□ -0.86
PTPRK-210ENST00000415055 BICRAQ9NZM4 1560 aa9.69□□□□□ -0.86
PTPRK-210ENST00000415055 GPR153Q6NV75 609 aa9.67□□□□□ -0.86
PTPRK-210ENST00000415055 VARS2Q5ST30 1063 aaKnown RBP9.65□□□□□ -0.86
PTPRK-210ENST00000415055 DNAJC5Q9H3Z4 198 aa9.65□□□□□ -0.86
PTPRK-210ENST00000415055 CECR2Q9BXF3 1484 aa9.64□□□□□ -0.87
PTPRK-210ENST00000415055 KIF3CO14782 793 aa9.63□□□□□ -0.87
PTPRK-210ENST00000415055 C2orf72A6NCS6 295 aa9.62□□□□□ -0.87
PTPRK-210ENST00000415055 ARSIQ5FYB1 569 aa9.62□□□□□ -0.87
PTPRK-210ENST00000415055 CC2D2AQ9P2K1 1620 aa9.62□□□□□ -0.87
PTPRK-210ENST00000415055 ZNF687Q8N1G0 1237 aa9.59□□□□□ -0.87
PTPRK-210ENST00000415055 PPP1R37O75864 691 aa9.58□□□□□ -0.88
PTPRK-210ENST00000415055 HS6ST3Q8IZP7 471 aa9.58□□□□□ -0.88
PTPRK-210ENST00000415055 TMC2Q8TDI7 906 aa9.58□□□□□ -0.88
PTPRK-210ENST00000415055 KHSRPQ92945 711 aaKnown RBP eCLIP9.57□□□□□ -0.881e-6■□□□□ 10.2
PTPRK-210ENST00000415055 ZNF316A6NFI3 1004 aaPredicted RBP9.56□□□□□ -0.88
PTPRK-210ENST00000415055 SLC34A2O95436 690 aa9.54□□□□□ -0.88
PTPRK-210ENST00000415055 CHGAP10645 457 aaKnown RBP9.52□□□□□ -0.89
PTPRK-210ENST00000415055 NUDT7P0C024 238 aa9.51□□□□□ -0.89
PTPRK-210ENST00000415055 PCDHGA4Q9Y5G9 962 aa9.51□□□□□ -0.89
PTPRK-210ENST00000415055 MYO15BQ96JP2 1530 aa9.51□□□□□ -0.89
PTPRK-210ENST00000415055 EIF4G1Q04637 1599 aaKnown RBP9.5□□□□□ -0.89
PTPRK-210ENST00000415055 RNF166Q96A37 237 aaPredicted RBP9.47□□□□□ -0.89
PTPRK-210ENST00000415055 LHX6Q9UPM6 363 aa9.47□□□□□ -0.89
PTPRK-210ENST00000415055 SHROOM4Q9ULL8 1493 aa9.47□□□□□ -0.89
PTPRK-210ENST00000415055 SCRIBQ14160 1630 aa9.46□□□□□ -0.89
PTPRK-210ENST00000415055 PTGER2P43116 358 aa9.45□□□□□ -0.9
PTPRK-210ENST00000415055 FOXK1P85037 733 aa9.45□□□□□ -0.9
PTPRK-210ENST00000415055 GPHNQ9NQX3 736 aaPredicted RBP9.45□□□□□ -0.9
PTPRK-210ENST00000415055 MYT1LQ9UL68 1186 aa9.45□□□□□ -0.9
PTPRK-210ENST00000415055 ANKRD13DQ6ZTN6 518 aa9.44□□□□□ -0.9
PTPRK-210ENST00000415055 RYDENQ9NUL5 291 aaKnown RBP9.44□□□□□ -0.9
PTPRK-210ENST00000415055 PBX2P40425 430 aa9.43□□□□□ -0.9
PTPRK-210ENST00000415055 NKX1-1Q15270 411 aaPredicted RBP9.43□□□□□ -0.9
PTPRK-210ENST00000415055 PLPP6Q8IY26 295 aa9.43□□□□□ -0.9
PTPRK-210ENST00000415055 PTCD2Q8WV60 388 aaKnown RBP9.43□□□□□ -0.9
PTPRK-210ENST00000415055 LSM11P83369 360 aaKnown RBP eCLIP9.42□□□□□ -0.9
PTPRK-210ENST00000415055 PSDA5PKW4 1024 aaPredicted RBP9.4□□□□□ -0.9
PTPRK-210ENST00000415055 DSG2Q14126 1118 aa9.4□□□□□ -0.9
PTPRK-210ENST00000415055 KDM4FA0A1W2PPD8 638 aa9.38□□□□□ -0.91
PTPRK-210ENST00000415055 TBC1D12O60347 775 aa9.38□□□□□ -0.91
PTPRK-210ENST00000415055 POTEEQ6S8J3 1075 aa9.37□□□□□ -0.91
PTPRK-210ENST00000415055 AXIN2Q9Y2T1 843 aa9.37□□□□□ -0.91
PTPRK-210ENST00000415055 ARHGAP33O14559 1287 aa9.34□□□□□ -0.91
PTPRK-210ENST00000415055 CRISPLD2Q9H0B8 497 aa9.33□□□□□ -0.92
PTPRK-210ENST00000415055 PPP4R3BQ5MIZ7 849 aa9.31□□□□□ -0.92
PTPRK-210ENST00000415055 ZCCHC6Q5VYS8 1495 aaKnown RBP9.31□□□□□ -0.92
PTPRK-210ENST00000415055 GTPBP6O43824 516 aaPredicted RBP9.3□□□□□ -0.92
PTPRK-210ENST00000415055 PDE4AP27815 886 aa9.3□□□□□ -0.92
PTPRK-210ENST00000415055 PPP1R15BQ5SWA1 713 aa9.3□□□□□ -0.92
PTPRK-210ENST00000415055 OXER1Q8TDS5 423 aa9.3□□□□□ -0.92
PTPRK-210ENST00000415055 ADGRD1Q6QNK2 874 aa9.29□□□□□ -0.92
PTPRK-210ENST00000415055 CUX2O14529 1486 aa9.28□□□□□ -0.92
PTPRK-210ENST00000415055 ERCC6Q03468 1493 aa9.28□□□□□ -0.92
PTPRK-210ENST00000415055 DCAF1Q9Y4B6 1507 aa9.28□□□□□ -0.92
PTPRK-210ENST00000415055 UPF1Q92900 1129 aaKnown RBP eCLIP9.28□□□□□ -0.92
PTPRK-210ENST00000415055 NCKAP5LQ9HCH0 1330 aa9.28□□□□□ -0.92
PTPRK-210ENST00000415055 TK2O00142 265 aa9.26□□□□□ -0.93
PTPRK-210ENST00000415055 PSEN2P49810 448 aa9.26□□□□□ -0.93
PTPRK-210ENST00000415055 DMRTA1Q5VZB9 504 aa9.25□□□□□ -0.93
PTPRK-210ENST00000415055 KCNH8Q96L42 1107 aa9.24□□□□□ -0.93
PTPRK-210ENST00000415055 LARP6Q9BRS8 491 aaKnown RBP9.23□□□□□ -0.93
PTPRK-210ENST00000415055 DDX27Q96GQ7 796 aaKnown RBP9.22□□□□□ -0.93
PTPRK-210ENST00000415055 HRO43593 1189 aa9.21□□□□□ -0.94
PTPRK-210ENST00000415055 ZNF454Q8N9F8 522 aa9.21□□□□□ -0.94
PTPRK-210ENST00000415055 KCNK17Q96T54 332 aa9.21□□□□□ -0.94
PTPRK-210ENST00000415055 HCSTQ9UBK5 93 aa9.2□□□□□ -0.94
PTPRK-210ENST00000415055 MFSD10Q14728 455 aa9.19□□□□□ -0.94
PTPRK-210ENST00000415055 ANO8Q9HCE9 1232 aaPredicted RBP9.19□□□□□ -0.94
PTPRK-210ENST00000415055 FOSBP53539 338 aa9.18□□□□□ -0.94
PTPRK-210ENST00000415055 STAC3Q96MF2 364 aa9.18□□□□□ -0.94
PTPRK-210ENST00000415055 BCL2L12Q9HB09 334 aa9.18□□□□□ -0.94
PTPRK-210ENST00000415055 EVI5O60447 810 aa9.17□□□□□ -0.94
PTPRK-210ENST00000415055 MAP3K9P80192 1104 aa9.16□□□□□ -0.94
PTPRK-210ENST00000415055 JPH4Q96JJ6 628 aa9.16□□□□□ -0.94
PTPRK-210ENST00000415055 PTPREP23469 700 aa9.14□□□□□ -0.95
PTPRK-210ENST00000415055 PLCB2Q00722 1185 aa9.14□□□□□ -0.95
PTPRK-210ENST00000415055 SLC4A5Q9BY07 1137 aa9.14□□□□□ -0.95
PTPRK-210ENST00000415055 VPS9D1Q9Y2B5 631 aa9.14□□□□□ -0.95
PTPRK-210ENST00000415055 CADPS2Q86UW7 1296 aa9.13□□□□□ -0.95
PTPRK-210ENST00000415055 ZDHHC16Q969W1 377 aa9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 89.7 ms