RNA–Protein interactions for RNA: ENST00000413539.6

DYSF-210, Transcript of dysferlin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene DYSF, Length 6,769 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DYSF-210ENST00000413539 TNNT3P45378 269 aaPredicted RBP19.03■□□□□ 0.64
DYSF-210ENST00000413539 SRPK2P78362 688 aaKnown RBP19.03■□□□□ 0.64
DYSF-210ENST00000413539 NOL8Q76FK4 1167 aaKnown RBP19.02■□□□□ 0.64
DYSF-210ENST00000413539 GOLGA3Q08378 1498 aa19.01■□□□□ 0.63
DYSF-210ENST00000413539 MORC1Q86VD1 984 aa19.01■□□□□ 0.63
DYSF-210ENST00000413539 ZNF330Q9Y3S2 320 aaPredicted RBP19.01■□□□□ 0.63
DYSF-210ENST00000413539 TMF1P82094 1093 aa19■□□□□ 0.63
DYSF-210ENST00000413539 KIAA1211Q6ZU35 1233 aa19■□□□□ 0.63
DYSF-210ENST00000413539 CREBRFQ8IUR6 639 aa19■□□□□ 0.63
DYSF-210ENST00000413539 MFAP1P55081 439 aaKnown RBP19■□□□□ 0.63
DYSF-210ENST00000413539 ITPRIPQ8IWB1 547 aa19■□□□□ 0.63
DYSF-210ENST00000413539 GBP4Q96PP9 640 aa19■□□□□ 0.63
DYSF-210ENST00000413539 PRM3Q9NNZ6 103 aa19■□□□□ 0.63
DYSF-210ENST00000413539 FOXD4L5Q5VV16 416 aaPredicted RBP18.97■□□□□ 0.63
DYSF-210ENST00000413539 FOXD4L4Q8WXT5 416 aaPredicted RBP18.97■□□□□ 0.63
DYSF-210ENST00000413539 RTF1Q92541 710 aaKnown RBP18.97■□□□□ 0.63
DYSF-210ENST00000413539 STK26Q9P289 416 aa18.96■□□□□ 0.63
DYSF-210ENST00000413539 A0A0U1RQG5 324 aaPredicted RBP18.95■□□□□ 0.62
DYSF-210ENST00000413539 MLECQ14165 292 aa18.95■□□□□ 0.62
DYSF-210ENST00000413539 GOLGA6L3A6NEY3 463 aa18.93■□□□□ 0.62
DYSF-210ENST00000413539 FOXD1Q16676 465 aa18.92■□□□□ 0.62
DYSF-210ENST00000413539 HSPA5P11021 654 aaKnown RBP18.92■□□□□ 0.62
DYSF-210ENST00000413539 TRIM6-TRIM34B2RNG4 842 aa18.91■□□□□ 0.62
DYSF-210ENST00000413539 RCAN3Q9UKA8 241 aa18.9■□□□□ 0.62
DYSF-210ENST00000413539 CHMP3Q9Y3E7 222 aa18.89■□□□□ 0.62
DYSF-210ENST00000413539 PAK3O75914 559 aaPredicted RBP18.89■□□□□ 0.61
DYSF-210ENST00000413539 GOLGA6L1Q8N7Z2 621 aa18.86■□□□□ 0.61
DYSF-210ENST00000413539 TPM4P67936 248 aa18.86■□□□□ 0.61
DYSF-210ENST00000413539 SYAP1Q96A49 352 aaPredicted RBP18.85■□□□□ 0.61
DYSF-210ENST00000413539 PTMSP20962 102 aa18.85■□□□□ 0.61
DYSF-210ENST00000413539 CCDC146Q8IYE0 955 aa18.84■□□□□ 0.61
DYSF-210ENST00000413539 U2AF1L5P0DN76 240 aaPredicted RBP18.84■□□□□ 0.61
DYSF-210ENST00000413539 U2AF1Q01081 240 aaKnown RBP eCLIP18.84■□□□□ 0.61
DYSF-210ENST00000413539 RWDD1Q9H446 243 aaPredicted RBP18.84■□□□□ 0.61
DYSF-210ENST00000413539 IPO8O15397 1037 aaKnown RBP18.83■□□□□ 0.61
DYSF-210ENST00000413539 KTN1Q86UP2 1357 aaKnown RBP18.83■□□□□ 0.61
DYSF-210ENST00000413539 FOXD4L6Q3SYB3 417 aaPredicted RBP18.83■□□□□ 0.6
DYSF-210ENST00000413539 FOXD4L3Q6VB84 417 aaPredicted RBP18.83■□□□□ 0.6
DYSF-210ENST00000413539 TSHZ2Q9NRE2 1034 aa18.82■□□□□ 0.6
DYSF-210ENST00000413539 CLUAP1Q96AJ1 413 aa18.82■□□□□ 0.6
DYSF-210ENST00000413539 RASSF8Q8NHQ8 419 aa18.82■□□□□ 0.6
DYSF-210ENST00000413539 CALD1Q05682 793 aaKnown RBP18.82■□□□□ 0.6
DYSF-210ENST00000413539 CFAP44Q96MT7 982 aa18.82■□□□□ 0.6
DYSF-210ENST00000413539 GORABQ5T7V8 394 aa18.81■□□□□ 0.6
DYSF-210ENST00000413539 SLC4A10Q6U841 1118 aa18.81■□□□□ 0.6
DYSF-210ENST00000413539 HTATSF1O43719 755 aaKnown RBP18.8■□□□□ 0.6
DYSF-210ENST00000413539 SLC4A3P48751 1232 aa18.79■□□□□ 0.6
DYSF-210ENST00000413539 IPO9Q96P70 1041 aaKnown RBP18.79■□□□□ 0.6
DYSF-210ENST00000413539 CCDC9Q9Y3X0 531 aaKnown RBP18.79■□□□□ 0.6
DYSF-210ENST00000413539 PATL2C9JE40 543 aaKnown RBP18.79■□□□□ 0.6
DYSF-210ENST00000413539 FBXO3Q9UK99 471 aa18.79■□□□□ 0.6
DYSF-210ENST00000413539 EIF4G1Q04637 1599 aaKnown RBP18.79■□□□□ 0.6
DYSF-210ENST00000413539 CCER2I3L3R5 266 aa18.79■□□□□ 0.6
DYSF-210ENST00000413539 TCERG1O14776 1098 aaKnown RBP18.78■□□□□ 0.6
DYSF-210ENST00000413539 SMC4Q9NTJ3 1288 aa18.78■□□□□ 0.6
DYSF-210ENST00000413539 CSB-PGBD3P0DP91 1061 aa18.77■□□□□ 0.6
DYSF-210ENST00000413539 PES1O00541 588 aaKnown RBP18.77■□□□□ 0.6
DYSF-210ENST00000413539 CCNB3Q8WWL7 1395 aa18.77■□□□□ 0.59
DYSF-210ENST00000413539 TAF7LQ5H9L4 462 aa18.76■□□□□ 0.59
DYSF-210ENST00000413539 PMFBP1Q8TBY8 1022 aa18.75■□□□□ 0.59
DYSF-210ENST00000413539 HDGFL2Q7Z4V5 671 aaPredicted RBP18.75■□□□□ 0.59
DYSF-210ENST00000413539 HSP90AA2PQ14568 343 aaPredicted RBP18.75■□□□□ 0.59
DYSF-210ENST00000413539 CCAR2Q8N163 923 aaKnown RBP18.75■□□□□ 0.59
DYSF-210ENST00000413539 KANK1Q14678 1352 aa18.74■□□□□ 0.59
DYSF-210ENST00000413539 VPS53Q5VIR6 699 aa18.74■□□□□ 0.59
DYSF-210ENST00000413539 WWC1Q8IX03 1113 aa18.74■□□□□ 0.59
DYSF-210ENST00000413539 ROCK2O75116 1388 aaKnown RBP18.73■□□□□ 0.59
DYSF-210ENST00000413539 TOMM22Q9NS69 142 aa18.73■□□□□ 0.59
DYSF-210ENST00000413539 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP18.73■□□□□ 0.59
DYSF-210ENST00000413539 GPATCH3Q96I76 525 aa18.72■□□□□ 0.59
DYSF-210ENST00000413539 GGT6Q6P531 493 aa18.71■□□□□ 0.59
DYSF-210ENST00000413539 PKD2Q13563 968 aa18.69■□□□□ 0.58
DYSF-210ENST00000413539 NUTM2DQ5VT03 806 aaPredicted RBP18.69■□□□□ 0.58
DYSF-210ENST00000413539 TPM3P06753 285 aa18.69■□□□□ 0.58
DYSF-210ENST00000413539 VSIG10Q8N0Z9 540 aa18.69■□□□□ 0.58
DYSF-210ENST00000413539 CSPP1Q1MSJ5 1256 aa18.69■□□□□ 0.58
DYSF-210ENST00000413539 CEP164Q9UPV0 1460 aa18.68■□□□□ 0.58
DYSF-210ENST00000413539 WRNQ14191 1432 aaPredicted RBP eCLIP18.68■□□□□ 0.58
DYSF-210ENST00000413539 STK31Q9BXU1 1019 aa18.68■□□□□ 0.58
DYSF-210ENST00000413539 TNIKQ9UKE5 1360 aa18.68■□□□□ 0.58
DYSF-210ENST00000413539 SF3A1Q15459 793 aaKnown RBP18.68■□□□□ 0.58
DYSF-210ENST00000413539 ZNF592Q92610 1267 aa18.68■□□□□ 0.58
DYSF-210ENST00000413539 BCL11BQ9C0K0 894 aaPredicted RBP18.67■□□□□ 0.58
DYSF-210ENST00000413539 KIF27Q86VH2 1401 aa18.66■□□□□ 0.58
DYSF-210ENST00000413539 TPD52L1Q16890 204 aaPredicted RBP18.66■□□□□ 0.58
DYSF-210ENST00000413539 KIF16BQ96L93 1317 aa18.66■□□□□ 0.58
DYSF-210ENST00000413539 RILPL2Q969X0 211 aa18.66■□□□□ 0.58
DYSF-210ENST00000413539 CEP89Q96ST8 783 aa18.65■□□□□ 0.58
DYSF-210ENST00000413539 RRP7AQ9Y3A4 280 aaKnown RBP18.65■□□□□ 0.58
DYSF-210ENST00000413539 MARCH6O60337 910 aa18.65■□□□□ 0.58
DYSF-210ENST00000413539 TRHP20396 242 aaPredicted RBP18.65■□□□□ 0.58
DYSF-210ENST00000413539 TIMELESSQ9UNS1 1208 aa18.65■□□□□ 0.58
DYSF-210ENST00000413539 PHF14O94880 888 aa18.64■□□□□ 0.57
DYSF-210ENST00000413539 LTV1Q96GA3 475 aaPredicted RBP18.64■□□□□ 0.57
DYSF-210ENST00000413539 H3BQV1 296 aa18.64■□□□□ 0.57
DYSF-210ENST00000413539 IFFO2Q5TF58 517 aa18.64■□□□□ 0.57
DYSF-210ENST00000413539 EEA1Q15075 1411 aa18.64■□□□□ 0.57
DYSF-210ENST00000413539 SPAG9O60271 1321 aaKnown RBP18.64■□□□□ 0.57
DYSF-210ENST00000413539 G3V3G9 751 aa18.64■□□□□ 0.57
DYSF-210ENST00000413539 SETQ01105 290 aaPredicted RBP18.64■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms