RNA–Protein interactions for RNA: ENST00000413081.1

TNRC18-204, Transcript of trinucleotide repeat containing 18, humanhuman

TSL 3

Gene TNRC18, Length 925 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC18-204ENST00000413081 SCAPERQ9BY12 1400 aa31.38■■■□□ 2.61
TNRC18-204ENST00000413081 PLCH2O75038 1416 aa31.36■■■□□ 2.61
TNRC18-204ENST00000413081 ATP1B4Q9UN42 357 aaPredicted RBP31.32■■■□□ 2.6
TNRC18-204ENST00000413081 MYO5CQ9NQX4 1742 aa31.32■■■□□ 2.6
TNRC18-204ENST00000413081 ATP10AO60312 1499 aa31.27■■■□□ 2.6
TNRC18-204ENST00000413081 C9orf84Q5VXU9 1444 aa31.27■■■□□ 2.6
TNRC18-204ENST00000413081 FMN1Q68DA7 1419 aa31.27■■■□□ 2.6
TNRC18-204ENST00000413081 EFCAB2Q5VUJ9 269 aa31.26■■■□□ 2.59
TNRC18-204ENST00000413081 CDK11AQ9UQ88 783 aaPredicted RBP31.25■■■□□ 2.59
TNRC18-204ENST00000413081 ARHGEF12Q9NZN5 1544 aa31.24■■■□□ 2.59
TNRC18-204ENST00000413081 UBTFP17480 764 aaKnown RBP31.23■■■□□ 2.59
TNRC18-204ENST00000413081 EHMT2Q96KQ7 1210 aa31.22■■■□□ 2.59
TNRC18-204ENST00000413081 PREX1Q8TCU6 1659 aa31.22■■■□□ 2.59
TNRC18-204ENST00000413081 KIF14Q15058 1648 aa31.21■■■□□ 2.59
TNRC18-204ENST00000413081 CERKQ8TCT0 537 aa31.21■■■□□ 2.59
TNRC18-204ENST00000413081 ZNF518AQ6AHZ1 1483 aa31.19■■■□□ 2.58
TNRC18-204ENST00000413081 ARHGAP5Q13017 1502 aa31.17■■■□□ 2.58
TNRC18-204ENST00000413081 ARHGAP35Q9NRY4 1499 aa31.14■■■□□ 2.58
TNRC18-204ENST00000413081 MYT1LQ9UL68 1186 aa31.14■■■□□ 2.58
TNRC18-204ENST00000413081 CLIP1P30622 1438 aa31.14■■■□□ 2.58
TNRC18-204ENST00000413081 TROQ12816 1431 aaPredicted RBP31.13■■■□□ 2.57
TNRC18-204ENST00000413081 KDM5CP41229 1560 aa31.11■■■□□ 2.57
TNRC18-204ENST00000413081 CEBPAP49715 358 aaPredicted RBP31.11■■■□□ 2.57
TNRC18-204ENST00000413081 AFAP1Q8N556 730 aa31.08■■■□□ 2.57
TNRC18-204ENST00000413081 UHRF1BP1Q6BDS2 1440 aa31.06■■■□□ 2.56
TNRC18-204ENST00000413081 DIP2CQ9Y2E4 1556 aa31.05■■■□□ 2.56
TNRC18-204ENST00000413081 DMRT2Q9Y5R5 561 aa31.05■■■□□ 2.56
TNRC18-204ENST00000413081 LRRIQ1Q96JM4 1722 aa31.03■■■□□ 2.56
TNRC18-204ENST00000413081 CDC42BPBQ9Y5S2 1711 aa31.01■■■□□ 2.56
TNRC18-204ENST00000413081 REREQ9P2R6 1566 aa31.01■■■□□ 2.56
TNRC18-204ENST00000413081 STRCQ7RTU9 1775 aa31.01■■■□□ 2.55
TNRC18-204ENST00000413081 SETD1BQ9UPS6 1966 aaKnown RBP30.99■■■□□ 2.55
TNRC18-204ENST00000413081 ABCA6Q8N139 1617 aa30.99■■■□□ 2.55
TNRC18-204ENST00000413081 ESF1Q9H501 851 aaKnown RBP30.97■■■□□ 2.55
TNRC18-204ENST00000413081 PREX2Q70Z35 1606 aa30.97■■■□□ 2.55
TNRC18-204ENST00000413081 MLH3Q9UHC1 1453 aa30.96■■■□□ 2.55
TNRC18-204ENST00000413081 C3P01024 1663 aa30.95■■■□□ 2.55
TNRC18-204ENST00000413081 ABCC1P33527 1531 aa30.93■■■□□ 2.54
TNRC18-204ENST00000413081 ITSN2Q9NZM3 1697 aa30.93■■■□□ 2.54
TNRC18-204ENST00000413081 CCDC18Q5T9S5 1454 aa30.91■■■□□ 2.54
TNRC18-204ENST00000413081 AGLP35573 1532 aa30.91■■■□□ 2.54
TNRC18-204ENST00000413081 TRAPPC8Q9Y2L5 1435 aa30.9■■■□□ 2.54
TNRC18-204ENST00000413081 PTPRTO14522 1441 aa30.85■■■□□ 2.53
TNRC18-204ENST00000413081 CASKIN1Q8WXD9 1431 aa30.85■■■□□ 2.53
TNRC18-204ENST00000413081 KIDINS220Q9ULH0 1771 aa30.84■■■□□ 2.53
TNRC18-204ENST00000413081 CDC42BPAQ5VT25 1732 aa30.83■■■□□ 2.53
TNRC18-204ENST00000413081 CNTLNQ9NXG0 1405 aa30.82■■■□□ 2.52
TNRC18-204ENST00000413081 DISP3Q9P2K9 1392 aa30.82■■■□□ 2.52
TNRC18-204ENST00000413081 CHIC1Q5VXU3 224 aa30.77■■■□□ 2.52
TNRC18-204ENST00000413081 ZNF777Q9ULD5 760 aaPredicted RBP30.75■■■□□ 2.51
TNRC18-204ENST00000413081 SAMD9LQ8IVG5 1584 aa30.75■■■□□ 2.51
TNRC18-204ENST00000413081 FYCO1Q9BQS8 1478 aa30.73■■■□□ 2.51
TNRC18-204ENST00000413081 MROH2AA6NES4 1674 aa30.73■■■□□ 2.51
TNRC18-204ENST00000413081 NCOA1Q15788 1441 aa30.73■■■□□ 2.51
TNRC18-204ENST00000413081 SYCP2Q9BX26 1530 aa30.71■■■□□ 2.51
TNRC18-204ENST00000413081 LTBP4Q8N2S1 1624 aa30.69■■■□□ 2.5
TNRC18-204ENST00000413081 SPAG9O60271 1321 aaKnown RBP30.69■■■□□ 2.5
TNRC18-204ENST00000413081 SUPT6HQ7KZ85 1726 aaKnown RBP30.68■■■□□ 2.5
TNRC18-204ENST00000413081 NPATQ14207 1427 aa30.68■■■□□ 2.5
TNRC18-204ENST00000413081 CAMSAP1Q5T5Y3 1602 aa30.67■■■□□ 2.5
TNRC18-204ENST00000413081 ILDR2Q71H61 639 aa30.67■■■□□ 2.5
TNRC18-204ENST00000413081 IQSEC2Q5JU85 1478 aa30.66■■■□□ 2.5
TNRC18-204ENST00000413081 SPATA31D1Q6ZQQ2 1576 aa30.66■■■□□ 2.5
TNRC18-204ENST00000413081 ZMYM3Q14202 1370 aa30.64■■■□□ 2.5
TNRC18-204ENST00000413081 ATP7AQ04656 1500 aa30.63■■■□□ 2.49
TNRC18-204ENST00000413081 GPATCH8Q9UKJ3 1502 aaKnown RBP30.63■■■□□ 2.49
TNRC18-204ENST00000413081 HNRNPMP52272 730 aaKnown RBP eCLIP30.62■■■□□ 2.491e-6■■□□□ 14
TNRC18-204ENST00000413081 CLTCQ00610 1675 aaKnown RBP30.61■■■□□ 2.49
TNRC18-204ENST00000413081 PLEKHH2Q8IVE3 1493 aa30.59■■■□□ 2.49
TNRC18-204ENST00000413081 SOCS7O14512 581 aa30.59■■■□□ 2.49
TNRC18-204ENST00000413081 INO80Q9ULG1 1556 aaPredicted RBP30.58■■■□□ 2.49
TNRC18-204ENST00000413081 CFDP1Q9UEE9 299 aaPredicted RBP30.57■■■□□ 2.48
TNRC18-204ENST00000413081 A2MP01023 1474 aa30.57■■■□□ 2.48
TNRC18-204ENST00000413081 KIAA1107Q9UPP5 1409 aa30.56■■■□□ 2.48
TNRC18-204ENST00000413081 MYO3AQ8NEV4 1616 aa30.56■■■□□ 2.48
TNRC18-204ENST00000413081 PLXNC1O60486 1568 aa30.56■■■□□ 2.48
TNRC18-204ENST00000413081 ZNF142P52746 1687 aaPredicted RBP30.55■■■□□ 2.48
TNRC18-204ENST00000413081 CCNB3Q8WWL7 1395 aa30.54■■■□□ 2.48
TNRC18-204ENST00000413081 NCKAP5LQ9HCH0 1330 aa30.54■■■□□ 2.48
TNRC18-204ENST00000413081 GGT6Q6P531 493 aa30.51■■■□□ 2.47
TNRC18-204ENST00000413081 CEP170BQ9Y4F5 1589 aaPredicted RBP30.5■■■□□ 2.47
TNRC18-204ENST00000413081 PLA2R1Q13018 1463 aa30.5■■■□□ 2.47
TNRC18-204ENST00000413081 MTUS2Q5JR59 1369 aa30.49■■■□□ 2.47
TNRC18-204ENST00000413081 ADGBQ8N7X0 1667 aa30.49■■■□□ 2.47
TNRC18-204ENST00000413081 ZNF335Q9H4Z2 1342 aaPredicted RBP30.48■■■□□ 2.47
TNRC18-204ENST00000413081 PTPRKQ15262 1439 aa30.48■■■□□ 2.47
TNRC18-204ENST00000413081 PKD2Q13563 968 aa30.48■■■□□ 2.47
TNRC18-204ENST00000413081 UBAP1LF5GYI3 381 aa30.44■■■□□ 2.46
TNRC18-204ENST00000413081 TCOF1Q13428 1488 aaKnown RBP30.43■■■□□ 2.46
TNRC18-204ENST00000413081 PPP6R1Q9UPN7 881 aa30.42■■■□□ 2.46
TNRC18-204ENST00000413081 TIAM1Q13009 1591 aa30.38■■■□□ 2.45
TNRC18-204ENST00000413081 ZNF644Q9H582 1327 aaPredicted RBP30.35■■■□□ 2.45
TNRC18-204ENST00000413081 A2ML1A8K2U0 1454 aa30.35■■■□□ 2.45
TNRC18-204ENST00000413081 EHBP1L1Q8N3D4 1523 aa30.35■■■□□ 2.45
TNRC18-204ENST00000413081 DNMT1P26358 1616 aaKnown RBP30.33■■■□□ 2.45
TNRC18-204ENST00000413081 MBD5Q9P267 1494 aa30.31■■■□□ 2.44
TNRC18-204ENST00000413081 RTEL1-TNFRSF6BF6WH68 1400 aa30.31■■■□□ 2.44
TNRC18-204ENST00000413081 DHX29Q7Z478 1369 aaKnown RBP30.28■■■□□ 2.44
TNRC18-204ENST00000413081 POLR1AO95602 1720 aaPredicted RBP30.28■■■□□ 2.44
TNRC18-204ENST00000413081 CEP162Q5TB80 1403 aa30.25■■■□□ 2.43
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms