RNA–Protein interactions for RNA: ENST00000410457.1

RNU2-28P-201, Transcript of RNA, U2 small nuclear 28, pseudogene, humanhuman

BASIC

Gene RNU2-28P, Length 189 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU2-28P-201ENST00000410457 CRISPLD2Q9H0B8 497 aa8.66□□□□□ -1.02
RNU2-28P-201ENST00000410457 TIE1P35590 1138 aa8.65□□□□□ -1.02
RNU2-28P-201ENST00000410457 MKRN3Q13064 507 aaKnown RBP8.65□□□□□ -1.02
RNU2-28P-201ENST00000410457 TRPC6Q9Y210 931 aa8.64□□□□□ -1.03
RNU2-28P-201ENST00000410457 ATMINO43313 823 aaPredicted RBP8.63□□□□□ -1.03
RNU2-28P-201ENST00000410457 MMRN1Q13201 1228 aa8.63□□□□□ -1.03
RNU2-28P-201ENST00000410457 ILDR1Q86SU0 546 aaPredicted RBP8.63□□□□□ -1.03
RNU2-28P-201ENST00000410457 LARP6Q9BRS8 491 aaKnown RBP8.63□□□□□ -1.03
RNU2-28P-201ENST00000410457 ARIH1Q9Y4X5 557 aaPredicted RBP8.63□□□□□ -1.03
RNU2-28P-201ENST00000410457 DDX27Q96GQ7 796 aaKnown RBP8.62□□□□□ -1.03
RNU2-28P-201ENST00000410457 TESPA1A2RU30 521 aaPredicted RBP8.61□□□□□ -1.03
RNU2-28P-201ENST00000410457 TTLL13PA6NNM8 815 aa8.61□□□□□ -1.03
RNU2-28P-201ENST00000410457 CAMK2BQ13554 666 aa8.59□□□□□ -1.03
RNU2-28P-201ENST00000410457 SEMA3EO15041 775 aa8.58□□□□□ -1.04
RNU2-28P-201ENST00000410457 BMP2KQ9NSY1 1161 aaPredicted RBP8.57□□□□□ -1.04
RNU2-28P-201ENST00000410457 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.57□□□□□ -1.04
RNU2-28P-201ENST00000410457 SMYD5Q6GMV2 418 aa8.55□□□□□ -1.04
RNU2-28P-201ENST00000410457 SPNS2Q8IVW8 549 aa8.55□□□□□ -1.04
RNU2-28P-201ENST00000410457 ZC3H15Q8WU90 426 aaKnown RBP8.54□□□□□ -1.04
RNU2-28P-201ENST00000410457 GPHNQ9NQX3 736 aaPredicted RBP8.54□□□□□ -1.04
RNU2-28P-201ENST00000410457 TRIM35Q9UPQ4 493 aa8.54□□□□□ -1.04
RNU2-28P-201ENST00000410457 TMEM132AQ24JP5 1023 aa8.53□□□□□ -1.04
RNU2-28P-201ENST00000410457 PPP1R15BQ5SWA1 713 aa8.51□□□□□ -1.05
RNU2-28P-201ENST00000410457 MICALL2Q8IY33 904 aa8.48□□□□□ -1.05
RNU2-28P-201ENST00000410457 PDCD7Q8N8D1 485 aaKnown RBP8.48□□□□□ -1.05
RNU2-28P-201ENST00000410457 IER5LQ5T953 404 aa8.47□□□□□ -1.05
RNU2-28P-201ENST00000410457 ZMYND10O75800 440 aa8.46□□□□□ -1.06
RNU2-28P-201ENST00000410457 ST18O60284 1047 aa8.45□□□□□ -1.06
RNU2-28P-201ENST00000410457 ATN1P54259 1190 aaPredicted RBP8.45□□□□□ -1.06
RNU2-28P-201ENST00000410457 BRPF1P55201 1214 aaPredicted RBP8.45□□□□□ -1.06
RNU2-28P-201ENST00000410457 IRX5P78411 483 aaPredicted RBP8.45□□□□□ -1.06
RNU2-28P-201ENST00000410457 FOXK1P85037 733 aa8.45□□□□□ -1.06
RNU2-28P-201ENST00000410457 DSG2Q14126 1118 aa8.45□□□□□ -1.06
RNU2-28P-201ENST00000410457 DPY19L2Q6NUT2 758 aa8.45□□□□□ -1.06
RNU2-28P-201ENST00000410457 TMEM121BQ9BXQ6 578 aaPredicted RBP8.45□□□□□ -1.06
RNU2-28P-201ENST00000410457 SPDYE16A6NNV3 312 aaPredicted RBP8.44□□□□□ -1.06
RNU2-28P-201ENST00000410457 TMC2Q8TDI7 906 aa8.44□□□□□ -1.06
RNU2-28P-201ENST00000410457 OCEL1Q9H607 264 aa8.44□□□□□ -1.06
RNU2-28P-201ENST00000410457 GTF3C3Q9Y5Q9 886 aa8.44□□□□□ -1.06
RNU2-28P-201ENST00000410457 POTEFA5A3E0 1075 aa8.43□□□□□ -1.06
RNU2-28P-201ENST00000410457 PDIA6Q15084 440 aa8.43□□□□□ -1.06
RNU2-28P-201ENST00000410457 EMILIN3Q9NT22 766 aa8.43□□□□□ -1.06
RNU2-28P-201ENST00000410457 ERICH6Q7L0X2 663 aa8.42□□□□□ -1.06
RNU2-28P-201ENST00000410457 SLC24A3Q9HC58 644 aa8.42□□□□□ -1.06
RNU2-28P-201ENST00000410457 DPYSL4O14531 572 aa8.41□□□□□ -1.06
RNU2-28P-201ENST00000410457 MLLT3P42568 568 aaPredicted RBP8.41□□□□□ -1.06
RNU2-28P-201ENST00000410457 BARGINQ6ZT62 677 aa8.41□□□□□ -1.06
RNU2-28P-201ENST00000410457 BOLA1Q9Y3E2 137 aa8.41□□□□□ -1.06
RNU2-28P-201ENST00000410457 KIF3CO14782 793 aa8.4□□□□□ -1.06
RNU2-28P-201ENST00000410457 G3V3G9 751 aa8.39□□□□□ -1.07
RNU2-28P-201ENST00000410457 GPIHBP1Q8IV16 184 aa8.39□□□□□ -1.07
RNU2-28P-201ENST00000410457 RBM26Q5T8P6 1007 aaKnown RBP8.38□□□□□ -1.07
RNU2-28P-201ENST00000410457 PLPP6Q8IY26 295 aa8.38□□□□□ -1.07
RNU2-28P-201ENST00000410457 C2orf72A6NCS6 295 aa8.37□□□□□ -1.07
RNU2-28P-201ENST00000410457 PLCG2P16885 1265 aa8.37□□□□□ -1.07
RNU2-28P-201ENST00000410457 NEUROD2Q15784 382 aa8.37□□□□□ -1.07
RNU2-28P-201ENST00000410457 L3MBTL3Q96JM7 780 aaPredicted RBP8.37□□□□□ -1.07
RNU2-28P-201ENST00000410457 TIMELESSQ9UNS1 1208 aa8.36□□□□□ -1.07
RNU2-28P-201ENST00000410457 SEC24BO95487 1268 aa8.35□□□□□ -1.07
RNU2-28P-201ENST00000410457 SLAIN1Q8ND83 568 aa8.34□□□□□ -1.07
RNU2-28P-201ENST00000410457 AK7Q96M32 723 aa8.34□□□□□ -1.07
RNU2-28P-201ENST00000410457 MAP3K9P80192 1104 aa8.31□□□□□ -1.08
RNU2-28P-201ENST00000410457 DAXXQ9UER7 740 aaPredicted RBP8.3□□□□□ -1.08
RNU2-28P-201ENST00000410457 SNPHO15079 494 aa8.29□□□□□ -1.08
RNU2-28P-201ENST00000410457 GPR37O15354 613 aa8.29□□□□□ -1.08
RNU2-28P-201ENST00000410457 PTGER2P43116 358 aa8.29□□□□□ -1.08
RNU2-28P-201ENST00000410457 KRI1Q8N9T8 703 aaKnown RBP8.29□□□□□ -1.08
RNU2-28P-201ENST00000410457 OXER1Q8TDS5 423 aa8.29□□□□□ -1.08
RNU2-28P-201ENST00000410457 COLQQ9Y215 455 aaPredicted RBP8.29□□□□□ -1.08
RNU2-28P-201ENST00000410457 TMEM92Q6UXU6 159 aa8.28□□□□□ -1.08
RNU2-28P-201ENST00000410457 GRXCR2A6NFK2 248 aa8.25□□□□□ -1.09
RNU2-28P-201ENST00000410457 TRIM66O15016 1216 aa8.25□□□□□ -1.09
RNU2-28P-201ENST00000410457 TBC1D12O60347 775 aa8.25□□□□□ -1.09
RNU2-28P-201ENST00000410457 UPF1Q92900 1129 aaKnown RBP eCLIP8.25□□□□□ -1.09
RNU2-28P-201ENST00000410457 OSBPP22059 807 aa8.24□□□□□ -1.09
RNU2-28P-201ENST00000410457 MINK1Q8N4C8 1332 aaPredicted RBP8.24□□□□□ -1.09
RNU2-28P-201ENST00000410457 NUTM2FA1L443 756 aa8.22□□□□□ -1.09
RNU2-28P-201ENST00000410457 ZNF316A6NFI3 1004 aaPredicted RBP8.22□□□□□ -1.09
RNU2-28P-201ENST00000410457 PDE4DQ08499 809 aa8.22□□□□□ -1.09
RNU2-28P-201ENST00000410457 MAP2K5Q13163 448 aa8.22□□□□□ -1.09
RNU2-28P-201ENST00000410457 PTCD2Q8WV60 388 aaKnown RBP8.22□□□□□ -1.09
RNU2-28P-201ENST00000410457 KDM4CQ9H3R0 1056 aa8.22□□□□□ -1.09
RNU2-28P-201ENST00000410457 GPBP1L1Q9HC44 474 aaPredicted RBP8.22□□□□□ -1.09
RNU2-28P-201ENST00000410457 SLC34A2O95436 690 aa8.21□□□□□ -1.1
RNU2-28P-201ENST00000410457 HIC1Q14526 733 aa8.21□□□□□ -1.1
RNU2-28P-201ENST00000410457 C14orf37Q86TY3 774 aa8.21□□□□□ -1.1
RNU2-28P-201ENST00000410457 GNPATO15228 680 aa8.2□□□□□ -1.1
RNU2-28P-201ENST00000410457 EVI5O60447 810 aa8.2□□□□□ -1.1
RNU2-28P-201ENST00000410457 FCHSD2O94868 740 aa8.2□□□□□ -1.1
RNU2-28P-201ENST00000410457 C3orf67Q6ZVT6 689 aa8.2□□□□□ -1.1
RNU2-28P-201ENST00000410457 DDX12PQ92771 950 aa8.19□□□□□ -1.1
RNU2-28P-201ENST00000410457 IRF6O14896 467 aa8.18□□□□□ -1.1
RNU2-28P-201ENST00000410457 CCDC102AQ96A19 550 aa8.18□□□□□ -1.1
RNU2-28P-201ENST00000410457 ANO8Q9HCE9 1232 aaPredicted RBP8.18□□□□□ -1.1
RNU2-28P-201ENST00000410457 AMHR2Q16671 573 aa8.17□□□□□ -1.1
RNU2-28P-201ENST00000410457 MARVELD3Q96A59 401 aa8.17□□□□□ -1.1
RNU2-28P-201ENST00000410457 KRTAP3-3Q9BYR6 98 aa8.17□□□□□ -1.1
RNU2-28P-201ENST00000410457 KRTAP3-2Q9BYR7 98 aa8.17□□□□□ -1.1
RNU2-28P-201ENST00000410457 PTGDRQ13258 359 aa8.15□□□□□ -1.1
RNU2-28P-201ENST00000410457 PRIM1P49642 420 aaKnown RBP8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 8.5 ms