RNA–Protein interactions for RNA: ENST00000409570.3

SCRN1-203, Transcript of secernin 1, humanhuman

TSL 4 BASIC

Gene SCRN1, Length 535 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCRN1-203ENST00000409570 SCAPERQ9BY12 1400 aa28.32■■■□□ 2.12
SCRN1-203ENST00000409570 MYO5CQ9NQX4 1742 aa28.3■■■□□ 2.12
SCRN1-203ENST00000409570 MLECQ14165 292 aa28.29■■■□□ 2.12
SCRN1-203ENST00000409570 ARHGEF12Q9NZN5 1544 aa28.24■■■□□ 2.11
SCRN1-203ENST00000409570 ATP10AO60312 1499 aa28.24■■■□□ 2.11
SCRN1-203ENST00000409570 KIF14Q15058 1648 aa28.22■■■□□ 2.11
SCRN1-203ENST00000409570 C9orf84Q5VXU9 1444 aa28.21■■■□□ 2.11
SCRN1-203ENST00000409570 FMN1Q68DA7 1419 aa28.2■■■□□ 2.11
SCRN1-203ENST00000409570 PREX1Q8TCU6 1659 aa28.19■■■□□ 2.1
SCRN1-203ENST00000409570 EFCAB2Q5VUJ9 269 aa28.19■■■□□ 2.1
SCRN1-203ENST00000409570 ATP1B4Q9UN42 357 aaPredicted RBP28.18■■■□□ 2.1
SCRN1-203ENST00000409570 ARHGAP35Q9NRY4 1499 aa28.18■■■□□ 2.1
SCRN1-203ENST00000409570 LRRIQ1Q96JM4 1722 aa28.16■■■□□ 2.1
SCRN1-203ENST00000409570 CERKQ8TCT0 537 aa28.15■■■□□ 2.1
SCRN1-203ENST00000409570 KDM5CP41229 1560 aa28.13■■■□□ 2.09
SCRN1-203ENST00000409570 UBTFP17480 764 aaKnown RBP28.13■■■□□ 2.09
SCRN1-203ENST00000409570 EHMT2Q96KQ7 1210 aa28.13■■■□□ 2.09
SCRN1-203ENST00000409570 ZNF518AQ6AHZ1 1483 aa28.13■■■□□ 2.09
SCRN1-203ENST00000409570 SETD1BQ9UPS6 1966 aaKnown RBP28.13■■■□□ 2.09
SCRN1-203ENST00000409570 CDK11AQ9UQ88 783 aaPredicted RBP28.12■■■□□ 2.09
SCRN1-203ENST00000409570 TROQ12816 1431 aaPredicted RBP28.11■■■□□ 2.09
SCRN1-203ENST00000409570 ARHGAP5Q13017 1502 aa28.11■■■□□ 2.09
SCRN1-203ENST00000409570 CEBPAP49715 358 aaPredicted RBP28.1■■■□□ 2.09
SCRN1-203ENST00000409570 CDC42BPBQ9Y5S2 1711 aa28.09■■■□□ 2.09
SCRN1-203ENST00000409570 STRCQ7RTU9 1775 aa28.09■■■□□ 2.09
SCRN1-203ENST00000409570 DIP2CQ9Y2E4 1556 aa28.07■■■□□ 2.08
SCRN1-203ENST00000409570 AFAP1Q8N556 730 aa28.07■■■□□ 2.08
SCRN1-203ENST00000409570 REREQ9P2R6 1566 aa28.04■■■□□ 2.08
SCRN1-203ENST00000409570 ABCA6Q8N139 1617 aa28.03■■■□□ 2.08
SCRN1-203ENST00000409570 CLIP1P30622 1438 aa28.03■■■□□ 2.08
SCRN1-203ENST00000409570 C3P01024 1663 aa28■■■□□ 2.07
SCRN1-203ENST00000409570 PREX2Q70Z35 1606 aa28■■■□□ 2.07
SCRN1-203ENST00000409570 UHRF1BP1Q6BDS2 1440 aa27.99■■■□□ 2.07
SCRN1-203ENST00000409570 MLH3Q9UHC1 1453 aa27.98■■■□□ 2.07
SCRN1-203ENST00000409570 ITSN2Q9NZM3 1697 aa27.97■■■□□ 2.07
SCRN1-203ENST00000409570 MYT1LQ9UL68 1186 aa27.97■■■□□ 2.07
SCRN1-203ENST00000409570 ABCC1P33527 1531 aa27.96■■■□□ 2.07
SCRN1-203ENST00000409570 AGLP35573 1532 aa27.94■■■□□ 2.06
SCRN1-203ENST00000409570 DMRT2Q9Y5R5 561 aa27.94■■■□□ 2.06
SCRN1-203ENST00000409570 TRAPPC8Q9Y2L5 1435 aa27.93■■■□□ 2.06
SCRN1-203ENST00000409570 CDC42BPAQ5VT25 1732 aa27.92■■■□□ 2.06
SCRN1-203ENST00000409570 KIDINS220Q9ULH0 1771 aa27.92■■■□□ 2.06
SCRN1-203ENST00000409570 CCDC18Q5T9S5 1454 aa27.88■■■□□ 2.05
SCRN1-203ENST00000409570 CASKIN1Q8WXD9 1431 aa27.87■■■□□ 2.05
SCRN1-203ENST00000409570 PTPRTO14522 1441 aa27.85■■■□□ 2.05
SCRN1-203ENST00000409570 CHIC1Q5VXU3 224 aa27.85■■■□□ 2.05
SCRN1-203ENST00000409570 ESF1Q9H501 851 aaKnown RBP27.81■■■□□ 2.04
SCRN1-203ENST00000409570 SAMD9LQ8IVG5 1584 aa27.79■■■□□ 2.04
SCRN1-203ENST00000409570 CNTLNQ9NXG0 1405 aa27.79■■■□□ 2.04
SCRN1-203ENST00000409570 MROH2AA6NES4 1674 aa27.78■■■□□ 2.04
SCRN1-203ENST00000409570 LTBP4Q8N2S1 1624 aa27.78■■■□□ 2.04
SCRN1-203ENST00000409570 NCOA1Q15788 1441 aa27.75■■■□□ 2.03
SCRN1-203ENST00000409570 DISP3Q9P2K9 1392 aa27.74■■■□□ 2.03
SCRN1-203ENST00000409570 SUPT6HQ7KZ85 1726 aaKnown RBP27.74■■■□□ 2.03
SCRN1-203ENST00000409570 FYCO1Q9BQS8 1478 aa27.74■■■□□ 2.03
SCRN1-203ENST00000409570 SYCP2Q9BX26 1530 aa27.73■■■□□ 2.03
SCRN1-203ENST00000409570 ILDR2Q71H61 639 aa27.71■■■□□ 2.03
SCRN1-203ENST00000409570 NPATQ14207 1427 aa27.7■■■□□ 2.03
SCRN1-203ENST00000409570 ZNF777Q9ULD5 760 aaPredicted RBP27.7■■■□□ 2.02
SCRN1-203ENST00000409570 GPATCH8Q9UKJ3 1502 aaKnown RBP27.7■■■□□ 2.02
SCRN1-203ENST00000409570 CAMSAP1Q5T5Y3 1602 aa27.69■■■□□ 2.02
SCRN1-203ENST00000409570 IQSEC2Q5JU85 1478 aa27.67■■■□□ 2.02
SCRN1-203ENST00000409570 CLTCQ00610 1675 aaKnown RBP27.67■■■□□ 2.02
SCRN1-203ENST00000409570 SPAG9O60271 1321 aaKnown RBP27.67■■■□□ 2.02
SCRN1-203ENST00000409570 ZMYM3Q14202 1370 aa27.66■■■□□ 2.02
SCRN1-203ENST00000409570 ATP7AQ04656 1500 aa27.66■■■□□ 2.02
SCRN1-203ENST00000409570 HNRNPMP52272 730 aaKnown RBP eCLIP27.65■■■□□ 2.02
SCRN1-203ENST00000409570 PLXNC1O60486 1568 aa27.65■■■□□ 2.02
SCRN1-203ENST00000409570 INO80Q9ULG1 1556 aaPredicted RBP27.65■■■□□ 2.02
SCRN1-203ENST00000409570 SPATA31D1Q6ZQQ2 1576 aa27.63■■■□□ 2.01
SCRN1-203ENST00000409570 ZNF142P52746 1687 aaPredicted RBP27.62■■■□□ 2.01
SCRN1-203ENST00000409570 KIAA1107Q9UPP5 1409 aa27.62■■■□□ 2.01
SCRN1-203ENST00000409570 MYO3AQ8NEV4 1616 aa27.6■■■□□ 2.01
SCRN1-203ENST00000409570 A2MP01023 1474 aa27.59■■■□□ 2.01
SCRN1-203ENST00000409570 PLEKHH2Q8IVE3 1493 aa27.59■■■□□ 2.01
SCRN1-203ENST00000409570 SOCS7O14512 581 aa27.58■■■□□ 2.01
SCRN1-203ENST00000409570 NCKAP5LQ9HCH0 1330 aa27.57■■■□□ 2
SCRN1-203ENST00000409570 CFDP1Q9UEE9 299 aaPredicted RBP27.56■■■□□ 2
SCRN1-203ENST00000409570 PTPRKQ15262 1439 aa27.55■■■□□ 2
SCRN1-203ENST00000409570 CEP170BQ9Y4F5 1589 aaPredicted RBP27.55■■■□□ 2
SCRN1-203ENST00000409570 ADGBQ8N7X0 1667 aa27.55■■■□□ 2
SCRN1-203ENST00000409570 CCNB3Q8WWL7 1395 aa27.54■■■□□ 2
SCRN1-203ENST00000409570 PLA2R1Q13018 1463 aa27.53■■■□□ 2
SCRN1-203ENST00000409570 ZNF335Q9H4Z2 1342 aaPredicted RBP27.51■■□□□ 1.99
SCRN1-203ENST00000409570 GGT6Q6P531 493 aa27.5■■□□□ 1.99
SCRN1-203ENST00000409570 TCOF1Q13428 1488 aaKnown RBP27.5■■□□□ 1.99
SCRN1-203ENST00000409570 PKD2Q13563 968 aa27.48■■□□□ 1.99
SCRN1-203ENST00000409570 TIAM1Q13009 1591 aa27.48■■□□□ 1.99
SCRN1-203ENST00000409570 MTUS2Q5JR59 1369 aa27.48■■□□□ 1.99
SCRN1-203ENST00000409570 PPP6R1Q9UPN7 881 aa27.45■■□□□ 1.98
SCRN1-203ENST00000409570 ZNF644Q9H582 1327 aaPredicted RBP27.44■■□□□ 1.98
SCRN1-203ENST00000409570 MBD5Q9P267 1494 aa27.44■■□□□ 1.98
SCRN1-203ENST00000409570 DNMT1P26358 1616 aaKnown RBP27.41■■□□□ 1.98
SCRN1-203ENST00000409570 UBAP1LF5GYI3 381 aa27.41■■□□□ 1.98
SCRN1-203ENST00000409570 A2ML1A8K2U0 1454 aa27.4■■□□□ 1.98
SCRN1-203ENST00000409570 EHBP1L1Q8N3D4 1523 aa27.4■■□□□ 1.98
SCRN1-203ENST00000409570 RTEL1-TNFRSF6BF6WH68 1400 aa27.38■■□□□ 1.97
SCRN1-203ENST00000409570 POLR1AO95602 1720 aaPredicted RBP27.38■■□□□ 1.97
SCRN1-203ENST00000409570 DHX29Q7Z478 1369 aaKnown RBP27.35■■□□□ 1.97
SCRN1-203ENST00000409570 CEP162Q5TB80 1403 aa27.33■■□□□ 1.97
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms