RNA–Protein interactions for RNA: ENST00000409189.7

CCL20-202, Transcript of C-C motif chemokine ligand 20, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CCL20, Length 839 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL20-202ENST00000409189 STK24Q9Y6E0 443 aa13.91□□□□□ -0.18
CCL20-202ENST00000409189 POTEB3A0JP26 581 aa13.9□□□□□ -0.18
CCL20-202ENST00000409189 NLRP6P59044 892 aa13.9□□□□□ -0.18
CCL20-202ENST00000409189 POTEBQ6S5H4 581 aa13.9□□□□□ -0.18
CCL20-202ENST00000409189 STK25O00506 426 aa13.89□□□□□ -0.19
CCL20-202ENST00000409189 HOXB3P14651 431 aaPredicted RBP13.89□□□□□ -0.19
CCL20-202ENST00000409189 TMEM92Q6UXU6 159 aa13.88□□□□□ -0.19
CCL20-202ENST00000409189 MFRPQ9BY79 579 aa13.88□□□□□ -0.19
CCL20-202ENST00000409189 DNAJC5Q9H3Z4 198 aa13.85□□□□□ -0.19
CCL20-202ENST00000409189 RB1CC1Q8TDY2 1594 aa13.82□□□□□ -0.2
CCL20-202ENST00000409189 DOK7Q18PE1 504 aa13.78□□□□□ -0.2
CCL20-202ENST00000409189 MYT1LQ9UL68 1186 aa13.77□□□□□ -0.21
CCL20-202ENST00000409189 HOXB1P14653 301 aaPredicted RBP13.76□□□□□ -0.21
CCL20-202ENST00000409189 PTGER2P43116 358 aa13.71□□□□□ -0.21
CCL20-202ENST00000409189 ZNF710Q8N1W2 664 aa13.71□□□□□ -0.21
CCL20-202ENST00000409189 HS6ST3Q8IZP7 471 aa13.7□□□□□ -0.22
CCL20-202ENST00000409189 ZSWIM6Q9HCJ5 1215 aa13.7□□□□□ -0.22
CCL20-202ENST00000409189 KIF3CO14782 793 aa13.68□□□□□ -0.22
CCL20-202ENST00000409189 RIMBP2O15034 1052 aa13.68□□□□□ -0.22
CCL20-202ENST00000409189 ERBB3P21860 1342 aa13.66□□□□□ -0.22
CCL20-202ENST00000409189 GPR153Q6NV75 609 aa13.64□□□□□ -0.23
CCL20-202ENST00000409189 PPP1R37O75864 691 aa13.62□□□□□ -0.23
CCL20-202ENST00000409189 UNC13AQ9UPW8 1703 aa13.61□□□□□ -0.23
CCL20-202ENST00000409189 C2orf72A6NCS6 295 aa13.6□□□□□ -0.23
CCL20-202ENST00000409189 NACADO15069 1562 aa13.56□□□□□ -0.24
CCL20-202ENST00000409189 BICRAQ9NZM4 1560 aa13.55□□□□□ -0.24
CCL20-202ENST00000409189 CHGAP10645 457 aaKnown RBP13.54□□□□□ -0.24
CCL20-202ENST00000409189 NKX1-1Q15270 411 aaPredicted RBP13.52□□□□□ -0.25
CCL20-202ENST00000409189 SLC34A2O95436 690 aa13.51□□□□□ -0.25
CCL20-202ENST00000409189 ARSIQ5FYB1 569 aa13.51□□□□□ -0.25
CCL20-202ENST00000409189 VARS2Q5ST30 1063 aaKnown RBP13.51□□□□□ -0.25
CCL20-202ENST00000409189 TMC2Q8TDI7 906 aa13.49□□□□□ -0.25
CCL20-202ENST00000409189 ZNF687Q8N1G0 1237 aa13.47□□□□□ -0.25
CCL20-202ENST00000409189 CECR2Q9BXF3 1484 aa13.47□□□□□ -0.25
CCL20-202ENST00000409189 KHSRPQ92945 711 aaKnown RBP eCLIP13.46□□□□□ -0.25
CCL20-202ENST00000409189 ZNF316A6NFI3 1004 aaPredicted RBP13.43□□□□□ -0.26
CCL20-202ENST00000409189 CC2D2AQ9P2K1 1620 aa13.42□□□□□ -0.26
CCL20-202ENST00000409189 RYDENQ9NUL5 291 aaKnown RBP13.41□□□□□ -0.26
CCL20-202ENST00000409189 PCDHGA4Q9Y5G9 962 aa13.41□□□□□ -0.26
CCL20-202ENST00000409189 FOXK1P85037 733 aa13.4□□□□□ -0.26
CCL20-202ENST00000409189 GPHNQ9NQX3 736 aaPredicted RBP13.4□□□□□ -0.26
CCL20-202ENST00000409189 DCAF8L2P0C7V8 631 aa13.39□□□□□ -0.27
CCL20-202ENST00000409189 NUDT7P0C024 238 aa13.37□□□□□ -0.27
CCL20-202ENST00000409189 PLA2G2EQ9NZK7 142 aa13.37□□□□□ -0.27
CCL20-202ENST00000409189 KDM4FA0A1W2PPD8 638 aa13.35□□□□□ -0.27
CCL20-202ENST00000409189 PTCD2Q8WV60 388 aaKnown RBP13.35□□□□□ -0.27
CCL20-202ENST00000409189 DSG2Q14126 1118 aa13.33□□□□□ -0.28
CCL20-202ENST00000409189 PLPP6Q8IY26 295 aa13.33□□□□□ -0.28
CCL20-202ENST00000409189 GTPBP6O43824 516 aaPredicted RBP13.31□□□□□ -0.28
CCL20-202ENST00000409189 CRISPLD2Q9H0B8 497 aa13.31□□□□□ -0.28
CCL20-202ENST00000409189 LHX6Q9UPM6 363 aa13.31□□□□□ -0.28
CCL20-202ENST00000409189 ANKRD13DQ6ZTN6 518 aa13.29□□□□□ -0.28
CCL20-202ENST00000409189 PBX2P40425 430 aa13.25□□□□□ -0.29
CCL20-202ENST00000409189 POTEEQ6S8J3 1075 aa13.25□□□□□ -0.29
CCL20-202ENST00000409189 HCSTQ9UBK5 93 aa13.24□□□□□ -0.29
CCL20-202ENST00000409189 NCKAP5LQ9HCH0 1330 aa13.23□□□□□ -0.29
CCL20-202ENST00000409189 LSM11P83369 360 aaKnown RBP eCLIP13.23□□□□□ -0.29
CCL20-202ENST00000409189 PSDA5PKW4 1024 aaPredicted RBP13.22□□□□□ -0.29
CCL20-202ENST00000409189 EIF4G1Q04637 1599 aaKnown RBP13.22□□□□□ -0.29
CCL20-202ENST00000409189 OXER1Q8TDS5 423 aa13.2□□□□□ -0.3
CCL20-202ENST00000409189 PPP1R15BQ5SWA1 713 aa13.18□□□□□ -0.3
CCL20-202ENST00000409189 TBC1D12O60347 775 aa13.17□□□□□ -0.3
CCL20-202ENST00000409189 PDE4AP27815 886 aa13.16□□□□□ -0.3
CCL20-202ENST00000409189 MYO15BQ96JP2 1530 aa13.14□□□□□ -0.31
CCL20-202ENST00000409189 AXIN2Q9Y2T1 843 aa13.14□□□□□ -0.31
CCL20-202ENST00000409189 SHROOM4Q9ULL8 1493 aa13.14□□□□□ -0.31
CCL20-202ENST00000409189 MFSD10Q14728 455 aa13.13□□□□□ -0.31
CCL20-202ENST00000409189 ARHGAP33O14559 1287 aa13.12□□□□□ -0.31
CCL20-202ENST00000409189 UPF1Q92900 1129 aaKnown RBP eCLIP13.09□□□□□ -0.31
CCL20-202ENST00000409189 PPP4R3BQ5MIZ7 849 aa13.08□□□□□ -0.32
CCL20-202ENST00000409189 RGS20O76081 388 aa13.07□□□□□ -0.32
CCL20-202ENST00000409189 DDX27Q96GQ7 796 aaKnown RBP13.07□□□□□ -0.32
CCL20-202ENST00000409189 LARP6Q9BRS8 491 aaKnown RBP13.07□□□□□ -0.32
CCL20-202ENST00000409189 CUX2O14529 1486 aa13.05□□□□□ -0.32
CCL20-202ENST00000409189 CADPS2Q86UW7 1296 aa13.05□□□□□ -0.32
CCL20-202ENST00000409189 TK2O00142 265 aa13.04□□□□□ -0.32
CCL20-202ENST00000409189 ADGRD1Q6QNK2 874 aa13.04□□□□□ -0.32
CCL20-202ENST00000409189 ANO8Q9HCE9 1232 aaPredicted RBP13.04□□□□□ -0.32
CCL20-202ENST00000409189 PSEN2P49810 448 aa13.02□□□□□ -0.33
CCL20-202ENST00000409189 DMRTA1Q5VZB9 504 aa13.02□□□□□ -0.33
CCL20-202ENST00000409189 AMER1Q5JTC6 1135 aaPredicted RBP13.01□□□□□ -0.33
CCL20-202ENST00000409189 BBXQ8WY36 941 aaPredicted RBP13.01□□□□□ -0.33
CCL20-202ENST00000409189 FOSBP53539 338 aa13□□□□□ -0.33
CCL20-202ENST00000409189 IRX2Q9BZI1 471 aaPredicted RBP13□□□□□ -0.33
CCL20-202ENST00000409189 HRO43593 1189 aa12.99□□□□□ -0.33
CCL20-202ENST00000409189 EMILIN3Q9NT22 766 aa12.99□□□□□ -0.33
CCL20-202ENST00000409189 ZNF454Q8N9F8 522 aa12.97□□□□□ -0.33
CCL20-202ENST00000409189 BCL2L12Q9HB09 334 aa12.97□□□□□ -0.33
CCL20-202ENST00000409189 EVI5O60447 810 aa12.96□□□□□ -0.33
CCL20-202ENST00000409189 JPH4Q96JJ6 628 aa12.96□□□□□ -0.33
CCL20-202ENST00000409189 SCRIBQ14160 1630 aa12.95□□□□□ -0.34
CCL20-202ENST00000409189 KCNK17Q96T54 332 aa12.94□□□□□ -0.34
CCL20-202ENST00000409189 CAMK2BQ13554 666 aa12.93□□□□□ -0.34
CCL20-202ENST00000409189 SLC4A5Q9BY07 1137 aa12.92□□□□□ -0.34
CCL20-202ENST00000409189 RTN4Q9NQC3 1192 aaKnown RBP12.92□□□□□ -0.34
CCL20-202ENST00000409189 KCNH8Q96L42 1107 aa12.91□□□□□ -0.34
CCL20-202ENST00000409189 MAP3K9P80192 1104 aa12.9□□□□□ -0.34
CCL20-202ENST00000409189 VPS9D1Q9Y2B5 631 aa12.89□□□□□ -0.35
CCL20-202ENST00000409189 ZDHHC16Q969W1 377 aa12.87□□□□□ -0.35
CCL20-202ENST00000409189 PTPREP23469 700 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms