RNA–Protein interactions for RNA: ENST00000402394.5

CGREF1-203, Transcript of cell growth regulator with EF-hand domain 1, humanhuman

APPRIS P2 TSL 2 BASIC

Gene CGREF1, Length 1,906 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CGREF1-203ENST00000402394 CAMSAP2Q08AD1 1489 aa38.06■■■■□ 3.68
CGREF1-203ENST00000402394 PTPRGP23470 1445 aa38.06■■■■□ 3.68
CGREF1-203ENST00000402394 PPP1R15AO75807 674 aaPredicted RBP38.05■■■■□ 3.68
CGREF1-203ENST00000402394 CFDP1Q9UEE9 299 aaPredicted RBP38.02■■■■□ 3.68
CGREF1-203ENST00000402394 ACIN1Q9UKV3 1341 aaKnown RBP38.02■■■■□ 3.68
CGREF1-203ENST00000402394 PLEKHD1A6NEE1 506 aa38.01■■■■□ 3.68
CGREF1-203ENST00000402394 CENPBP07199 599 aaPredicted RBP38■■■■□ 3.67
CGREF1-203ENST00000402394 DENND4BO75064 1496 aaPredicted RBP38■■■■□ 3.67
CGREF1-203ENST00000402394 TONSLQ96HA7 1378 aa37.99■■■■□ 3.67
CGREF1-203ENST00000402394 ABCC10Q5T3U5 1492 aa37.98■■■■□ 3.67
CGREF1-203ENST00000402394 TRIM52Q96A61 297 aa37.93■■■■□ 3.66
CGREF1-203ENST00000402394 CDC42BPAQ5VT25 1732 aa37.92■■■■□ 3.66
CGREF1-203ENST00000402394 CROCC2H7BZ55 1655 aa37.89■■■■□ 3.66
CGREF1-203ENST00000402394 ADGBQ8N7X0 1667 aa37.89■■■■□ 3.66
CGREF1-203ENST00000402394 SCAF1Q9H7N4 1312 aaKnown RBP37.88■■■■□ 3.65
CGREF1-203ENST00000402394 ADGRL2O95490 1459 aa37.87■■■■□ 3.65
CGREF1-203ENST00000402394 MPHOSPH9Q99550 1183 aa37.87■■■■□ 3.65
CGREF1-203ENST00000402394 KDM5BQ9UGL1 1544 aa37.84■■■■□ 3.65
CGREF1-203ENST00000402394 NCOA1Q15788 1441 aa37.83■■■■□ 3.65
CGREF1-203ENST00000402394 ZNF777Q9ULD5 760 aaPredicted RBP37.81■■■■□ 3.64
CGREF1-203ENST00000402394 CLASP1Q7Z460 1538 aa37.77■■■■□ 3.64
CGREF1-203ENST00000402394 ERCC6L2Q5T890 1561 aa37.76■■■■□ 3.64
CGREF1-203ENST00000402394 SHANK2Q9UPX8 1470 aa37.75■■■■□ 3.63
CGREF1-203ENST00000402394 ABCC2Q92887 1545 aa37.71■■■■□ 3.63
CGREF1-203ENST00000402394 ANKRD30AQ9BXX3 1397 aa37.71■■■■□ 3.63
CGREF1-203ENST00000402394 YTHDC1Q96MU7 727 aaKnown RBP37.7■■■■□ 3.63
CGREF1-203ENST00000402394 ANKRD30BQ9BXX2 1392 aa37.67■■■■□ 3.62
CGREF1-203ENST00000402394 PREX2Q70Z35 1606 aa37.65■■■■□ 3.62
CGREF1-203ENST00000402394 ARHGEF5Q12774 1597 aa37.65■■■■□ 3.62
CGREF1-203ENST00000402394 PZPP20742 1482 aa37.63■■■■□ 3.61
CGREF1-203ENST00000402394 C9orf84Q5VXU9 1444 aa37.62■■■■□ 3.61
CGREF1-203ENST00000402394 CDC42BPBQ9Y5S2 1711 aa37.6■■■■□ 3.61
CGREF1-203ENST00000402394 FOXD1Q16676 465 aa37.59■■■■□ 3.61
CGREF1-203ENST00000402394 SLC4A1APQ9BWU0 796 aaKnown RBP37.59■■■■□ 3.61
CGREF1-203ENST00000402394 RPRD2Q5VT52 1461 aaKnown RBP37.59■■■■□ 3.61
CGREF1-203ENST00000402394 MBD5Q9P267 1494 aa37.58■■■■□ 3.61
CGREF1-203ENST00000402394 ANKRD50Q9ULJ7 1429 aa37.57■■■■□ 3.6
CGREF1-203ENST00000402394 SAMD9LQ8IVG5 1584 aa37.56■■■■□ 3.6
CGREF1-203ENST00000402394 UHRF1BP1LA0JNW5 1464 aa37.54■■■■□ 3.6
CGREF1-203ENST00000402394 TTC37Q6PGP7 1564 aa37.52■■■■□ 3.6
CGREF1-203ENST00000402394 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP37.52■■■■□ 3.6
CGREF1-203ENST00000402394 OSCARQ8IYS5 282 aa37.51■■■■□ 3.59
CGREF1-203ENST00000402394 TSPY4P0CV99 314 aa37.5■■■■□ 3.59
CGREF1-203ENST00000402394 TSPY10P0CW01 314 aa37.5■■■■□ 3.59
CGREF1-203ENST00000402394 DDX10Q13206 875 aaKnown RBP37.5■■■■□ 3.59
CGREF1-203ENST00000402394 HIRIP3Q9BW71 556 aaPredicted RBP37.49■■■■□ 3.59
CGREF1-203ENST00000402394 CCDC141Q6ZP82 1450 aa37.48■■■■□ 3.59
CGREF1-203ENST00000402394 HNRNPMP52272 730 aaKnown RBP eCLIP37.48■■■■□ 3.59
CGREF1-203ENST00000402394 L3MBTL2Q969R5 705 aa37.48■■■■□ 3.59
CGREF1-203ENST00000402394 TEX14Q8IWB6 1497 aa37.47■■■■□ 3.59
CGREF1-203ENST00000402394 RSPH4AQ5TD94 716 aa37.45■■■■□ 3.59
CGREF1-203ENST00000402394 KIAA1107Q9UPP5 1409 aa37.45■■■■□ 3.59
CGREF1-203ENST00000402394 ZCCHC11Q5TAX3 1644 aaKnown RBP37.43■■■■□ 3.58
CGREF1-203ENST00000402394 ARHGAP5Q13017 1502 aa37.41■■■■□ 3.58
CGREF1-203ENST00000402394 KDM5DQ9BY66 1539 aa37.41■■■■□ 3.58
CGREF1-203ENST00000402394 GTF3C3Q9Y5Q9 886 aa37.41■■■■□ 3.58
CGREF1-203ENST00000402394 KIF15Q9NS87 1388 aa37.4■■■■□ 3.58
CGREF1-203ENST00000402394 MYO5CQ9NQX4 1742 aa37.4■■■■□ 3.58
CGREF1-203ENST00000402394 SYCP2Q9BX26 1530 aa37.36■■■■□ 3.57
CGREF1-203ENST00000402394 MAST1Q9Y2H9 1570 aa37.36■■■■□ 3.57
CGREF1-203ENST00000402394 PLEKHH2Q8IVE3 1493 aa37.33■■■■□ 3.57
CGREF1-203ENST00000402394 PKD2Q13563 968 aa37.32■■■■□ 3.57
CGREF1-203ENST00000402394 NUP155O75694 1391 aa37.31■■■■□ 3.56
CGREF1-203ENST00000402394 HSPA5P11021 654 aaKnown RBP37.27■■■■□ 3.56
CGREF1-203ENST00000402394 PLCH2O75038 1416 aa37.26■■■■□ 3.56
CGREF1-203ENST00000402394 EIF4G2P78344 907 aaKnown RBP eCLIP37.25■■■■□ 3.55
CGREF1-203ENST00000402394 KCNH8Q96L42 1107 aa37.24■■■■□ 3.55
CGREF1-203ENST00000402394 NBPF8Q3BBV2 869 aa37.23■■■■□ 3.55
CGREF1-203ENST00000402394 PLXNC1O60486 1568 aa37.21■■■■□ 3.55
CGREF1-203ENST00000402394 ARHGEF12Q9NZN5 1544 aa37.16■■■■□ 3.54
CGREF1-203ENST00000402394 ANP32CO43423 234 aa37.14■■■■□ 3.54
CGREF1-203ENST00000402394 EFCAB2Q5VUJ9 269 aa37.12■■■■□ 3.53
CGREF1-203ENST00000402394 UNC13BO14795 1591 aa37.12■■■■□ 3.53
CGREF1-203ENST00000402394 FAM135AQ9P2D6 1515 aa37.12■■■■□ 3.53
CGREF1-203ENST00000402394 CCER2I3L3R5 266 aa37.12■■■■□ 3.53
CGREF1-203ENST00000402394 ABCC1P33527 1531 aa37.11■■■■□ 3.53
CGREF1-203ENST00000402394 ARAP3Q8WWN8 1544 aa37.11■■■■□ 3.53
CGREF1-203ENST00000402394 WASHC2AQ641Q2 1341 aa37.11■■■■□ 3.53
CGREF1-203ENST00000402394 SPATA31E1Q6ZUB1 1445 aa37.07■■■■□ 3.53
CGREF1-203ENST00000402394 WDR7Q9Y4E6 1490 aa37.05■■■■□ 3.52
CGREF1-203ENST00000402394 DUOX2Q9NRD8 1548 aa37.05■■■■□ 3.52
CGREF1-203ENST00000402394 UHRF1BP1Q6BDS2 1440 aa37■■■■□ 3.51
CGREF1-203ENST00000402394 ERBINQ96RT1 1412 aa36.99■■■■□ 3.51
CGREF1-203ENST00000402394 TRAPPC8Q9Y2L5 1435 aa36.97■■■■□ 3.51
CGREF1-203ENST00000402394 IQGAP3Q86VI3 1631 aa36.96■■■■□ 3.51
CGREF1-203ENST00000402394 CCDC7Q96M83 1385 aa36.96■■■■□ 3.51
CGREF1-203ENST00000402394 MAGI2Q86UL8 1455 aa36.95■■■■□ 3.51
CGREF1-203ENST00000402394 POLR1AO95602 1720 aaPredicted RBP36.93■■■■□ 3.5
CGREF1-203ENST00000402394 CNTLNQ9NXG0 1405 aa36.92■■■■□ 3.5
CGREF1-203ENST00000402394 C11orf95C9JLR9 678 aaPredicted RBP36.92■■■■□ 3.5
CGREF1-203ENST00000402394 ABCA9Q8IUA7 1624 aa36.92■■■■□ 3.5
CGREF1-203ENST00000402394 RALGAPBQ86X10 1494 aa36.89■■■■□ 3.5
CGREF1-203ENST00000402394 RTEL1-TNFRSF6BF6WH68 1400 aa36.88■■■■□ 3.5
CGREF1-203ENST00000402394 PLA2R1Q13018 1463 aa36.83■■■■□ 3.49
CGREF1-203ENST00000402394 ZFYVE16Q7Z3T8 1539 aa36.83■■■■□ 3.49
CGREF1-203ENST00000402394 USP47Q96K76 1375 aa36.83■■■■□ 3.49
CGREF1-203ENST00000402394 CCDC144AA2RUR9 1427 aa36.83■■■■□ 3.49
CGREF1-203ENST00000402394 ASXL2Q76L83 1435 aa36.83■■■■□ 3.49
CGREF1-203ENST00000402394 KDM5CP41229 1560 aa36.82■■■■□ 3.49
CGREF1-203ENST00000402394 ZNF326Q5BKZ1 582 aaKnown RBP36.82■■■■□ 3.48
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms