RNA–Protein interactions for RNA: ENST00000398495.6

MBD1-209, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 5 BASIC

Gene MBD1, Length 2,178 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-209ENST00000398495 CDC42BPAQ5VT25 1732 aa22.19■■□□□ 1.14
MBD1-209ENST00000398495 ABCC10Q5T3U5 1492 aa22.18■■□□□ 1.14
MBD1-209ENST00000398495 CLASP1Q7Z460 1538 aa22.18■■□□□ 1.14
MBD1-209ENST00000398495 ROCK1Q13464 1354 aa22.17■■□□□ 1.14
MBD1-209ENST00000398495 CROCC2H7BZ55 1655 aa22.16■■□□□ 1.14
MBD1-209ENST00000398495 PLEKHD1A6NEE1 506 aa22.15■■□□□ 1.14
MBD1-209ENST00000398495 CFDP1Q9UEE9 299 aaPredicted RBP22.15■■□□□ 1.14
MBD1-209ENST00000398495 ADGBQ8N7X0 1667 aa22.14■■□□□ 1.13
MBD1-209ENST00000398495 DENND4BO75064 1496 aaPredicted RBP22.13■■□□□ 1.13
MBD1-209ENST00000398495 TIMELESSQ9UNS1 1208 aa22.11■■□□□ 1.13
MBD1-209ENST00000398495 ZNF777Q9ULD5 760 aaPredicted RBP22.08■■□□□ 1.13
MBD1-209ENST00000398495 ABCC2Q92887 1545 aa22.07■■□□□ 1.12
MBD1-209ENST00000398495 TRIM52Q96A61 297 aa22.07■■□□□ 1.12
MBD1-209ENST00000398495 MIER1Q8N108 512 aa22.05■■□□□ 1.12
MBD1-209ENST00000398495 ADGRL2O95490 1459 aa22.04■■□□□ 1.12
MBD1-209ENST00000398495 TONSLQ96HA7 1378 aa22.04■■□□□ 1.12
MBD1-209ENST00000398495 PREX2Q70Z35 1606 aa22.03■■□□□ 1.12
MBD1-209ENST00000398495 PPP1R15AO75807 674 aaPredicted RBP22.02■■□□□ 1.12
MBD1-209ENST00000398495 CDC42BPBQ9Y5S2 1711 aa22.01■■□□□ 1.11
MBD1-209ENST00000398495 NCOA1Q15788 1441 aa22.01■■□□□ 1.11
MBD1-209ENST00000398495 KDM5BQ9UGL1 1544 aa22.01■■□□□ 1.11
MBD1-209ENST00000398495 TTC37Q6PGP7 1564 aa21.99■■□□□ 1.11
MBD1-209ENST00000398495 MPHOSPH9Q99550 1183 aa21.99■■□□□ 1.11
MBD1-209ENST00000398495 SHANK2Q9UPX8 1470 aa21.98■■□□□ 1.11
MBD1-209ENST00000398495 SAMD9LQ8IVG5 1584 aa21.98■■□□□ 1.11
MBD1-209ENST00000398495 ZCCHC11Q5TAX3 1644 aaKnown RBP21.97■■□□□ 1.11
MBD1-209ENST00000398495 ARHGEF5Q12774 1597 aa21.96■■□□□ 1.11
MBD1-209ENST00000398495 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.95■■□□□ 1.1
MBD1-209ENST00000398495 C9orf84Q5VXU9 1444 aa21.94■■□□□ 1.1
MBD1-209ENST00000398495 ANKRD30AQ9BXX3 1397 aa21.94■■□□□ 1.1
MBD1-209ENST00000398495 UHRF1BP1LA0JNW5 1464 aa21.94■■□□□ 1.1
MBD1-209ENST00000398495 ACIN1Q9UKV3 1341 aaKnown RBP21.93■■□□□ 1.1
MBD1-209ENST00000398495 PZPP20742 1482 aa21.93■■□□□ 1.1
MBD1-209ENST00000398495 FOXD1Q16676 465 aa21.92■■□□□ 1.1
MBD1-209ENST00000398495 MBD5Q9P267 1494 aa21.91■■□□□ 1.1
MBD1-209ENST00000398495 MYO5CQ9NQX4 1742 aa21.91■■□□□ 1.1
MBD1-209ENST00000398495 ANKRD30BQ9BXX2 1392 aa21.88■■□□□ 1.09
MBD1-209ENST00000398495 ARHGAP5Q13017 1502 aa21.88■■□□□ 1.09
MBD1-209ENST00000398495 HNRNPMP52272 730 aaKnown RBP eCLIP21.88■■□□□ 1.09
MBD1-209ENST00000398495 CCDC141Q6ZP82 1450 aa21.87■■□□□ 1.09
MBD1-209ENST00000398495 ANKRD50Q9ULJ7 1429 aa21.86■■□□□ 1.09
MBD1-209ENST00000398495 SYCP2Q9BX26 1530 aa21.86■■□□□ 1.09
MBD1-209ENST00000398495 SLC4A1APQ9BWU0 796 aaKnown RBP21.85■■□□□ 1.09
MBD1-209ENST00000398495 RPRD2Q5VT52 1461 aaKnown RBP21.83■■□□□ 1.09
MBD1-209ENST00000398495 TSPY4P0CV99 314 aa21.81■■□□□ 1.08
MBD1-209ENST00000398495 TSPY10P0CW01 314 aa21.81■■□□□ 1.08
MBD1-209ENST00000398495 CENPBP07199 599 aaPredicted RBP21.81■■□□□ 1.08
MBD1-209ENST00000398495 YTHDC1Q96MU7 727 aaKnown RBP21.81■■□□□ 1.08
MBD1-209ENST00000398495 KIF15Q9NS87 1388 aa21.8■■□□□ 1.08
MBD1-209ENST00000398495 HIRIP3Q9BW71 556 aaPredicted RBP21.8■■□□□ 1.08
MBD1-209ENST00000398495 MAST1Q9Y2H9 1570 aa21.8■■□□□ 1.08
MBD1-209ENST00000398495 KCNH8Q96L42 1107 aa21.8■■□□□ 1.08
MBD1-209ENST00000398495 TEX14Q8IWB6 1497 aa21.78■■□□□ 1.08
MBD1-209ENST00000398495 KDM5DQ9BY66 1539 aa21.78■■□□□ 1.08
MBD1-209ENST00000398495 KIAA1107Q9UPP5 1409 aa21.78■■□□□ 1.08
MBD1-209ENST00000398495 SCAF1Q9H7N4 1312 aaKnown RBP21.76■■□□□ 1.07
MBD1-209ENST00000398495 L3MBTL2Q969R5 705 aa21.76■■□□□ 1.07
MBD1-209ENST00000398495 PLEKHH2Q8IVE3 1493 aa21.75■■□□□ 1.07
MBD1-209ENST00000398495 PLCH2O75038 1416 aa21.75■■□□□ 1.07
MBD1-209ENST00000398495 ARHGEF12Q9NZN5 1544 aa21.74■■□□□ 1.07
MBD1-209ENST00000398495 RSPH4AQ5TD94 716 aa21.72■■□□□ 1.07
MBD1-209ENST00000398495 NUP155O75694 1391 aa21.72■■□□□ 1.07
MBD1-209ENST00000398495 PLXNC1O60486 1568 aa21.72■■□□□ 1.07
MBD1-209ENST00000398495 PKD2Q13563 968 aa21.72■■□□□ 1.07
MBD1-209ENST00000398495 DDX10Q13206 875 aaKnown RBP21.71■■□□□ 1.07
MBD1-209ENST00000398495 ABCC1P33527 1531 aa21.71■■□□□ 1.07
MBD1-209ENST00000398495 WDR7Q9Y4E6 1490 aa21.69■■□□□ 1.06
MBD1-209ENST00000398495 UNC13BO14795 1591 aa21.66■■□□□ 1.06
MBD1-209ENST00000398495 ARAP3Q8WWN8 1544 aa21.65■■□□□ 1.06
MBD1-209ENST00000398495 EFCAB2Q5VUJ9 269 aa21.64■■□□□ 1.06
MBD1-209ENST00000398495 FAM135AQ9P2D6 1515 aa21.64■■□□□ 1.05
MBD1-209ENST00000398495 NBPF8Q3BBV2 869 aa21.64■■□□□ 1.05
MBD1-209ENST00000398495 HSPA5P11021 654 aaKnown RBP21.63■■□□□ 1.05
MBD1-209ENST00000398495 OSCARQ8IYS5 282 aa21.63■■□□□ 1.05
MBD1-209ENST00000398495 ABCA9Q8IUA7 1624 aa21.62■■□□□ 1.05
MBD1-209ENST00000398495 TRAPPC8Q9Y2L5 1435 aa21.61■■□□□ 1.05
MBD1-209ENST00000398495 DUOX2Q9NRD8 1548 aa21.6■■□□□ 1.05
MBD1-209ENST00000398495 ASXL2Q76L83 1435 aa21.58■■□□□ 1.04
MBD1-209ENST00000398495 IQGAP3Q86VI3 1631 aa21.57■■□□□ 1.04
MBD1-209ENST00000398495 EIF4G2P78344 907 aaKnown RBP eCLIP21.57■■□□□ 1.04
MBD1-209ENST00000398495 ERBINQ96RT1 1412 aa21.55■■□□□ 1.04
MBD1-209ENST00000398495 MAGI2Q86UL8 1455 aa21.54■■□□□ 1.04
MBD1-209ENST00000398495 ZFYVE16Q7Z3T8 1539 aa21.54■■□□□ 1.04
MBD1-209ENST00000398495 FANCAO15360 1455 aa21.53■■□□□ 1.04
MBD1-209ENST00000398495 WASHC2AQ641Q2 1341 aa21.51■■□□□ 1.03
MBD1-209ENST00000398495 GTF3C3Q9Y5Q9 886 aa21.5■■□□□ 1.03
MBD1-209ENST00000398495 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.5■■□□□ 1.03
MBD1-209ENST00000398495 INO80Q9ULG1 1556 aaPredicted RBP21.49■■□□□ 1.03
MBD1-209ENST00000398495 RTEL1-TNFRSF6BF6WH68 1400 aa21.48■■□□□ 1.03
MBD1-209ENST00000398495 SPATA31E1Q6ZUB1 1445 aa21.48■■□□□ 1.03
MBD1-209ENST00000398495 SPAG9O60271 1321 aaKnown RBP21.48■■□□□ 1.03
MBD1-209ENST00000398495 UHRF1BP1Q6BDS2 1440 aa21.47■■□□□ 1.03
MBD1-209ENST00000398495 AFAP1Q8N556 730 aa21.47■■□□□ 1.03
MBD1-209ENST00000398495 POLR1AO95602 1720 aaPredicted RBP21.46■■□□□ 1.03
MBD1-209ENST00000398495 PLA2R1Q13018 1463 aa21.46■■□□□ 1.03
MBD1-209ENST00000398495 ATP7AQ04656 1500 aa21.46■■□□□ 1.03
MBD1-209ENST00000398495 ZNF326Q5BKZ1 582 aaKnown RBP21.46■■□□□ 1.03
MBD1-209ENST00000398495 ADGRL1O94910 1474 aa21.45■■□□□ 1.03
MBD1-209ENST00000398495 ANP32CO43423 234 aa21.45■■□□□ 1.02
MBD1-209ENST00000398495 RALGAPBQ86X10 1494 aa21.44■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 136.9 ms