RNA–Protein interactions for RNA: ENST00000396966.6

SCNN1A-205, Transcript of sodium channel epithelial 1 alpha subunit, humanhuman

TSL 3 BASIC

Gene SCNN1A, Length 2,336 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1A-205ENST00000396966 KDM5BQ9UGL1 1544 aa25.16■■□□□ 1.62
SCNN1A-205ENST00000396966 ZNF644Q9H582 1327 aaPredicted RBP25.16■■□□□ 1.62
SCNN1A-205ENST00000396966 CHIC2Q9UKJ5 165 aa25.15■■□□□ 1.62
SCNN1A-205ENST00000396966 ABCC5O15440 1437 aa25.14■■□□□ 1.61
SCNN1A-205ENST00000396966 PREX2Q70Z35 1606 aa25.14■■□□□ 1.61
SCNN1A-205ENST00000396966 CROCC2H7BZ55 1655 aa25.13■■□□□ 1.61
SCNN1A-205ENST00000396966 CDC42BPBQ9Y5S2 1711 aa25.12■■□□□ 1.61
SCNN1A-205ENST00000396966 ZNF777Q9ULD5 760 aaPredicted RBP25.12■■□□□ 1.61
SCNN1A-205ENST00000396966 ADGBQ8N7X0 1667 aa25.12■■□□□ 1.61
SCNN1A-205ENST00000396966 MAPKBP1O60336 1514 aa25.12■■□□□ 1.61
SCNN1A-205ENST00000396966 ROCK1Q13464 1354 aa25.11■■□□□ 1.61
SCNN1A-205ENST00000396966 RRP7BPQ9NSQ0 103 aa25.11■■□□□ 1.61
SCNN1A-205ENST00000396966 MYO5CQ9NQX4 1742 aa25.09■■□□□ 1.61
SCNN1A-205ENST00000396966 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP25.08■■□□□ 1.61
SCNN1A-205ENST00000396966 TTC37Q6PGP7 1564 aa25.07■■□□□ 1.6
SCNN1A-205ENST00000396966 ZNF316A6NFI3 1004 aaPredicted RBP25.05■■□□□ 1.6
SCNN1A-205ENST00000396966 ACIN1Q9UKV3 1341 aaKnown RBP25.02■■□□□ 1.6
SCNN1A-205ENST00000396966 KDM6BO15054 1643 aa25.01■■□□□ 1.59
SCNN1A-205ENST00000396966 SAMD9LQ8IVG5 1584 aa25.01■■□□□ 1.59
SCNN1A-205ENST00000396966 ARHGEF5Q12774 1597 aa25■■□□□ 1.59
SCNN1A-205ENST00000396966 KCNH8Q96L42 1107 aa25■■□□□ 1.59
SCNN1A-205ENST00000396966 ARHGAP5Q13017 1502 aa24.99■■□□□ 1.59
SCNN1A-205ENST00000396966 ADGRL2O95490 1459 aa24.99■■□□□ 1.59
SCNN1A-205ENST00000396966 SHANK2Q9UPX8 1470 aa24.98■■□□□ 1.59
SCNN1A-205ENST00000396966 NCOA1Q15788 1441 aa24.95■■□□□ 1.58
SCNN1A-205ENST00000396966 SCAF1Q9H7N4 1312 aaKnown RBP24.94■■□□□ 1.58
SCNN1A-205ENST00000396966 ANKRD30AQ9BXX3 1397 aa24.94■■□□□ 1.58
SCNN1A-205ENST00000396966 WDR7Q9Y4E6 1490 aa24.93■■□□□ 1.58
SCNN1A-205ENST00000396966 TRIM52Q96A61 297 aa24.92■■□□□ 1.58
SCNN1A-205ENST00000396966 TSPY4P0CV99 314 aa24.91■■□□□ 1.58
SCNN1A-205ENST00000396966 TSPY10P0CW01 314 aa24.91■■□□□ 1.58
SCNN1A-205ENST00000396966 RSPH4AQ5TD94 716 aa24.91■■□□□ 1.58
SCNN1A-205ENST00000396966 PLEKHH2Q8IVE3 1493 aa24.91■■□□□ 1.58
SCNN1A-205ENST00000396966 MBD5Q9P267 1494 aa24.91■■□□□ 1.58
SCNN1A-205ENST00000396966 C9orf84Q5VXU9 1444 aa24.91■■□□□ 1.58
SCNN1A-205ENST00000396966 CCDC141Q6ZP82 1450 aa24.91■■□□□ 1.58
SCNN1A-205ENST00000396966 PLCH2O75038 1416 aa24.9■■□□□ 1.58
SCNN1A-205ENST00000396966 HNRNPMP52272 730 aaKnown RBP eCLIP24.89■■□□□ 1.58
SCNN1A-205ENST00000396966 SYCP2Q9BX26 1530 aa24.88■■□□□ 1.57
SCNN1A-205ENST00000396966 NPM1P06748 294 aaKnown RBP eCLIP24.87■■□□□ 1.57
SCNN1A-205ENST00000396966 SIN3AQ96ST3 1273 aa24.86■■□□□ 1.57
SCNN1A-205ENST00000396966 ARAP3Q8WWN8 1544 aa24.85■■□□□ 1.57
SCNN1A-205ENST00000396966 TIMELESSQ9UNS1 1208 aa24.85■■□□□ 1.57
SCNN1A-205ENST00000396966 NEUROD1Q13562 356 aa24.85■■□□□ 1.57
SCNN1A-205ENST00000396966 KIAA1107Q9UPP5 1409 aa24.85■■□□□ 1.57
SCNN1A-205ENST00000396966 ABCA9Q8IUA7 1624 aa24.84■■□□□ 1.57
SCNN1A-205ENST00000396966 ASXL2Q76L83 1435 aa24.84■■□□□ 1.57
SCNN1A-205ENST00000396966 EFCAB2Q5VUJ9 269 aa24.83■■□□□ 1.57
SCNN1A-205ENST00000396966 MAST1Q9Y2H9 1570 aa24.83■■□□□ 1.57
SCNN1A-205ENST00000396966 MPHOSPH9Q99550 1183 aa24.8■■□□□ 1.56
SCNN1A-205ENST00000396966 ANKRD50Q9ULJ7 1429 aa24.8■■□□□ 1.56
SCNN1A-205ENST00000396966 ABCC1P33527 1531 aa24.78■■□□□ 1.56
SCNN1A-205ENST00000396966 DENND4BO75064 1496 aaPredicted RBP24.78■■□□□ 1.56
SCNN1A-205ENST00000396966 KIF15Q9NS87 1388 aa24.75■■□□□ 1.55
SCNN1A-205ENST00000396966 PLXNC1O60486 1568 aa24.74■■□□□ 1.55
SCNN1A-205ENST00000396966 ARHGEF12Q9NZN5 1544 aa24.73■■□□□ 1.55
SCNN1A-205ENST00000396966 TONSLQ96HA7 1378 aa24.72■■□□□ 1.55
SCNN1A-205ENST00000396966 RIMBP3CA6NJZ7 1639 aa24.71■■□□□ 1.55
SCNN1A-205ENST00000396966 RIMBP3BA6NNM3 1639 aa24.71■■□□□ 1.55
SCNN1A-205ENST00000396966 RIMBP3Q9UFD9 1639 aa24.71■■□□□ 1.55
SCNN1A-205ENST00000396966 CENPBP07199 599 aaPredicted RBP24.71■■□□□ 1.55
SCNN1A-205ENST00000396966 SLC4A1APQ9BWU0 796 aaKnown RBP24.71■■□□□ 1.55
SCNN1A-205ENST00000396966 FANCAO15360 1455 aa24.7■■□□□ 1.54
SCNN1A-205ENST00000396966 PZPP20742 1482 aa24.7■■□□□ 1.54
SCNN1A-205ENST00000396966 MIER1Q8N108 512 aa24.67■■□□□ 1.54
SCNN1A-205ENST00000396966 KDM5DQ9BY66 1539 aa24.65■■□□□ 1.54
SCNN1A-205ENST00000396966 TRAPPC8Q9Y2L5 1435 aa24.64■■□□□ 1.53
SCNN1A-205ENST00000396966 CFAP74Q9C0B2 1584 aa24.63■■□□□ 1.53
SCNN1A-205ENST00000396966 PPP1R15AO75807 674 aaPredicted RBP24.63■■□□□ 1.53
SCNN1A-205ENST00000396966 DUOX2Q9NRD8 1548 aa24.63■■□□□ 1.53
SCNN1A-205ENST00000396966 ANKRD30BQ9BXX2 1392 aa24.62■■□□□ 1.53
SCNN1A-205ENST00000396966 NUP155O75694 1391 aa24.61■■□□□ 1.53
SCNN1A-205ENST00000396966 FOXD1Q16676 465 aa24.61■■□□□ 1.53
SCNN1A-205ENST00000396966 ADGRL1O94910 1474 aa24.6■■□□□ 1.53
SCNN1A-205ENST00000396966 CYB5RLQ6IPT4 315 aa24.6■■□□□ 1.53
SCNN1A-205ENST00000396966 YTHDC1Q96MU7 727 aaKnown RBP24.59■■□□□ 1.53
SCNN1A-205ENST00000396966 RTEL1-TNFRSF6BF6WH68 1400 aa24.59■■□□□ 1.53
SCNN1A-205ENST00000396966 UNC13BO14795 1591 aa24.59■■□□□ 1.53
SCNN1A-205ENST00000396966 CD109Q6YHK3 1445 aa24.57■■□□□ 1.52
SCNN1A-205ENST00000396966 SPAG9O60271 1321 aaKnown RBP24.57■■□□□ 1.52
SCNN1A-205ENST00000396966 ERBINQ96RT1 1412 aa24.56■■□□□ 1.52
SCNN1A-205ENST00000396966 ZFYVE16Q7Z3T8 1539 aa24.56■■□□□ 1.52
SCNN1A-205ENST00000396966 RPRD2Q5VT52 1461 aaKnown RBP24.55■■□□□ 1.52
SCNN1A-205ENST00000396966 SCAPERQ9BY12 1400 aa24.55■■□□□ 1.52
SCNN1A-205ENST00000396966 PKD2Q13563 968 aa24.54■■□□□ 1.52
SCNN1A-205ENST00000396966 INO80Q9ULG1 1556 aaPredicted RBP24.54■■□□□ 1.52
SCNN1A-205ENST00000396966 AFAP1Q8N556 730 aa24.53■■□□□ 1.52
SCNN1A-205ENST00000396966 GTF3C3Q9Y5Q9 886 aa24.52■■□□□ 1.52
SCNN1A-205ENST00000396966 ATP7AQ04656 1500 aa24.52■■□□□ 1.52
SCNN1A-205ENST00000396966 FAM135AQ9P2D6 1515 aa24.52■■□□□ 1.52
SCNN1A-205ENST00000396966 IQGAP3Q86VI3 1631 aa24.5■■□□□ 1.51
SCNN1A-205ENST00000396966 MAP3K4Q9Y6R4 1608 aa24.46■■□□□ 1.51
SCNN1A-205ENST00000396966 ZNF518AQ6AHZ1 1483 aa24.46■■□□□ 1.51
SCNN1A-205ENST00000396966 MAGI2Q86UL8 1455 aa24.45■■□□□ 1.5
SCNN1A-205ENST00000396966 GLI2P10070 1586 aa24.44■■□□□ 1.5
SCNN1A-205ENST00000396966 NEO1Q92859 1461 aa24.43■■□□□ 1.5
SCNN1A-205ENST00000396966 MYT1LQ9UL68 1186 aa24.43■■□□□ 1.5
SCNN1A-205ENST00000396966 L3MBTL2Q969R5 705 aa24.43■■□□□ 1.5
SCNN1A-205ENST00000396966 KIDINS220Q9ULH0 1771 aa24.42■■□□□ 1.5
SCNN1A-205ENST00000396966 TEX14Q8IWB6 1497 aa24.42■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms