RNA–Protein interactions for RNA: ENST00000396617.7

MKL1-202, Transcript of MKL/myocardin-like protein 1, humanhuman

TSL 1 (best) BASIC

Gene MKL1, Length 4,505 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKL1-202ENST00000396617 TIAM1Q13009 1591 aa18.85■□□□□ 0.61
MKL1-202ENST00000396617 SLC24A1O60721 1099 aa18.84■□□□□ 0.61
MKL1-202ENST00000396617 BCL11AQ9H165 835 aa18.83■□□□□ 0.61
MKL1-202ENST00000396617 SENP3Q9H4L4 574 aaPredicted RBP18.83■□□□□ 0.61
MKL1-202ENST00000396617 PTPRGP23470 1445 aa18.83■□□□□ 0.61
MKL1-202ENST00000396617 ROCK2O75116 1388 aaKnown RBP18.82■□□□□ 0.6
MKL1-202ENST00000396617 ABCA10Q8WWZ4 1543 aa18.81■□□□□ 0.6
MKL1-202ENST00000396617 BIVM-ERCC5R4GMW8 1640 aa18.8■□□□□ 0.6
MKL1-202ENST00000396617 ZNF644Q9H582 1327 aaPredicted RBP18.8■□□□□ 0.6
MKL1-202ENST00000396617 CFAP53Q96M91 514 aa18.79■□□□□ 0.6
MKL1-202ENST00000396617 PLPPR3Q6T4P5 718 aa18.78■□□□□ 0.6
MKL1-202ENST00000396617 UPF2Q9HAU5 1272 aaKnown RBP18.76■□□□□ 0.59
MKL1-202ENST00000396617 B4GALNT3Q6L9W6 998 aa18.76■□□□□ 0.59
MKL1-202ENST00000396617 KTN1Q86UP2 1357 aaKnown RBP18.76■□□□□ 0.59
MKL1-202ENST00000396617 MRC2Q9UBG0 1479 aa18.75■□□□□ 0.59
MKL1-202ENST00000396617 RALBP1Q15311 655 aa18.75■□□□□ 0.59
MKL1-202ENST00000396617 SPAG9O60271 1321 aaKnown RBP18.74■□□□□ 0.59
MKL1-202ENST00000396617 ERICH6BQ5W0A0 696 aa18.72■□□□□ 0.59
MKL1-202ENST00000396617 GGT6Q6P531 493 aa18.72■□□□□ 0.59
MKL1-202ENST00000396617 PRDM2Q13029 1718 aa18.71■□□□□ 0.59
MKL1-202ENST00000396617 EHBP1L1Q8N3D4 1523 aa18.7■□□□□ 0.58
MKL1-202ENST00000396617 KIF3BO15066 747 aa18.7■□□□□ 0.58
MKL1-202ENST00000396617 IFT140Q96RY7 1462 aa18.7■□□□□ 0.58
MKL1-202ENST00000396617 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.7■□□□□ 0.58
MKL1-202ENST00000396617 LAMC3Q9Y6N6 1575 aa18.7■□□□□ 0.58
MKL1-202ENST00000396617 ANP32EQ9BTT0 268 aa18.7■□□□□ 0.58
MKL1-202ENST00000396617 PRKRIP1Q9H875 184 aaPredicted RBP18.7■□□□□ 0.58
MKL1-202ENST00000396617 ST20-MTHFSA0A0A6YYL1 179 aa18.69■□□□□ 0.58
MKL1-202ENST00000396617 CCDC144AA2RUR9 1427 aa18.69■□□□□ 0.58
MKL1-202ENST00000396617 HFM1A2PYH4 1435 aa18.68■□□□□ 0.58
MKL1-202ENST00000396617 MAP3K1Q13233 1512 aa18.68■□□□□ 0.58
MKL1-202ENST00000396617 NEUROD2Q15784 382 aa18.67■□□□□ 0.58
MKL1-202ENST00000396617 POGKQ9P215 609 aa18.67■□□□□ 0.58
MKL1-202ENST00000396617 MIA2Q96PC5 1412 aa18.66■□□□□ 0.58
MKL1-202ENST00000396617 USP47Q96K76 1375 aa18.66■□□□□ 0.58
MKL1-202ENST00000396617 TNNT2P45379 298 aaPredicted RBP18.66■□□□□ 0.58
MKL1-202ENST00000396617 NBR1Q14596 966 aa18.66■□□□□ 0.58
MKL1-202ENST00000396617 PCF11O94913 1555 aaKnown RBP18.65■□□□□ 0.58
MKL1-202ENST00000396617 CUL7Q14999 1698 aa18.64■□□□□ 0.57
MKL1-202ENST00000396617 NLRP13Q86W25 1043 aa18.63■□□□□ 0.57
MKL1-202ENST00000396617 ANKRD50Q9ULJ7 1429 aa18.63■□□□□ 0.57
MKL1-202ENST00000396617 NUDCQ9Y266 331 aa18.63■□□□□ 0.57
MKL1-202ENST00000396617 KIF15Q9NS87 1388 aa18.62■□□□□ 0.57
MKL1-202ENST00000396617 DNAJC5BQ9UF47 199 aa18.62■□□□□ 0.57
MKL1-202ENST00000396617 HECW1Q76N89 1606 aa18.6■□□□□ 0.57
MKL1-202ENST00000396617 RBM19Q9Y4C8 960 aaKnown RBP18.6■□□□□ 0.57
MKL1-202ENST00000396617 ARID4BQ4LE39 1312 aaPredicted RBP18.6■□□□□ 0.57
MKL1-202ENST00000396617 PPM1GO15355 546 aaPredicted RBP18.59■□□□□ 0.57
MKL1-202ENST00000396617 CCDC7Q96M83 1385 aa18.59■□□□□ 0.57
MKL1-202ENST00000396617 MORC1Q86VD1 984 aa18.59■□□□□ 0.57
MKL1-202ENST00000396617 SNAPC4Q5SXM2 1469 aa18.58■□□□□ 0.57
MKL1-202ENST00000396617 MAPK8IP3Q9UPT6 1336 aa18.58■□□□□ 0.57
MKL1-202ENST00000396617 SUPT6HQ7KZ85 1726 aaKnown RBP18.58■□□□□ 0.57
MKL1-202ENST00000396617 TSHZ2Q9NRE2 1034 aa18.57■□□□□ 0.56
MKL1-202ENST00000396617 EIF3AQ14152 1382 aaKnown RBP18.57■□□□□ 0.56
MKL1-202ENST00000396617 TROQ12816 1431 aaPredicted RBP18.57■□□□□ 0.56
MKL1-202ENST00000396617 RCAN3Q9UKA8 241 aa18.57■□□□□ 0.56
MKL1-202ENST00000396617 URB2Q14146 1524 aaKnown RBP18.57■□□□□ 0.56
MKL1-202ENST00000396617 KIAA0586Q9BVV6 1533 aa18.56■□□□□ 0.56
MKL1-202ENST00000396617 NAIPQ13075 1403 aa18.56■□□□□ 0.56
MKL1-202ENST00000396617 DDRGK1Q96HY6 314 aa18.56■□□□□ 0.56
MKL1-202ENST00000396617 EPRSP07814 1512 aaKnown RBP18.56■□□□□ 0.56
MKL1-202ENST00000396617 HSP90AA1P07900 732 aaKnown RBP18.56■□□□□ 0.56
MKL1-202ENST00000396617 KIF7Q2M1P5 1343 aa18.55■□□□□ 0.56
MKL1-202ENST00000396617 WASHC2AQ641Q2 1341 aa18.55■□□□□ 0.56
MKL1-202ENST00000396617 MYBBP1AQ9BQG0 1328 aaKnown RBP18.55■□□□□ 0.56
MKL1-202ENST00000396617 SRPK2P78362 688 aaKnown RBP18.55■□□□□ 0.56
MKL1-202ENST00000396617 PRG4Q92954 1404 aaPredicted RBP18.55■□□□□ 0.56
MKL1-202ENST00000396617 IQGAP2Q13576 1575 aa18.54■□□□□ 0.56
MKL1-202ENST00000396617 SAFB2Q14151 953 aaKnown RBP eCLIP18.54■□□□□ 0.56
MKL1-202ENST00000396617 U2SURPO15042 1029 aaKnown RBP18.53■□□□□ 0.56
MKL1-202ENST00000396617 FRAT1Q92837 279 aaPredicted RBP18.53■□□□□ 0.56
MKL1-202ENST00000396617 SYNJ2O15056 1496 aa18.53■□□□□ 0.56
MKL1-202ENST00000396617 ZBED9Q6R2W3 1325 aa18.53■□□□□ 0.56
MKL1-202ENST00000396617 CNTLNQ9NXG0 1405 aa18.52■□□□□ 0.56
MKL1-202ENST00000396617 FTSJ3Q8IY81 847 aaKnown RBP18.52■□□□□ 0.55
MKL1-202ENST00000396617 CDK13Q14004 1512 aaKnown RBP18.51■□□□□ 0.55
MKL1-202ENST00000396617 WDR97A6NE52 1622 aa18.51■□□□□ 0.55
MKL1-202ENST00000396617 MYH16Q9H6N6 1097 aa18.51■□□□□ 0.55
MKL1-202ENST00000396617 PDE3BQ13370 1112 aa18.51■□□□□ 0.55
MKL1-202ENST00000396617 PANK3Q9H999 370 aa18.5■□□□□ 0.55
MKL1-202ENST00000396617 STK26Q9P289 416 aa18.5■□□□□ 0.55
MKL1-202ENST00000396617 WASHC2CQ9Y4E1 1318 aa18.49■□□□□ 0.55
MKL1-202ENST00000396617 MLECQ14165 292 aa18.49■□□□□ 0.55
MKL1-202ENST00000396617 RGS3P49796 1198 aa18.49■□□□□ 0.55
MKL1-202ENST00000396617 DAPK1P53355 1430 aa18.49■□□□□ 0.55
MKL1-202ENST00000396617 PNNQ9H307 717 aaKnown RBP18.46■□□□□ 0.55
MKL1-202ENST00000396617 NBPF8Q3BBV2 869 aa18.45■□□□□ 0.54
MKL1-202ENST00000396617 KIAA1107Q9UPP5 1409 aa18.45■□□□□ 0.54
MKL1-202ENST00000396617 BECN1Q14457 450 aa18.44■□□□□ 0.54
MKL1-202ENST00000396617 NOP58Q9Y2X3 529 aaKnown RBP18.44■□□□□ 0.54
MKL1-202ENST00000396617 HDGFP51858 240 aaKnown RBP18.44■□□□□ 0.54
MKL1-202ENST00000396617 C9orf84Q5VXU9 1444 aa18.44■□□□□ 0.54
MKL1-202ENST00000396617 LAS1LQ9Y4W2 734 aaKnown RBP18.44■□□□□ 0.54
MKL1-202ENST00000396617 MS4A1P11836 297 aa18.44■□□□□ 0.54
MKL1-202ENST00000396617 ROCK1Q13464 1354 aa18.44■□□□□ 0.54
MKL1-202ENST00000396617 C14orf37Q86TY3 774 aa18.43■□□□□ 0.54
MKL1-202ENST00000396617 GOLGA2Q08379 1002 aa18.42■□□□□ 0.54
MKL1-202ENST00000396617 PTPN23Q9H3S7 1636 aa18.41■□□□□ 0.54
MKL1-202ENST00000396617 ARHGAP5Q13017 1502 aa18.41■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms