RNA–Protein interactions for RNA: ENST00000396133.7

CCNE2-202, Transcript of cyclin E2, humanhuman

TSL 1 (best) BASIC

Gene CCNE2, Length 1,361 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNE2-202ENST00000396133 GTF3C3Q9Y5Q9 886 aa14.3□□□□□ -0.12
CCNE2-202ENST00000396133 TTLL13PA6NNM8 815 aa14.28□□□□□ -0.12
CCNE2-202ENST00000396133 SMYD5Q6GMV2 418 aa14.27□□□□□ -0.12
CCNE2-202ENST00000396133 TIMELESSQ9UNS1 1208 aa14.27□□□□□ -0.12
CCNE2-202ENST00000396133 ILDR1Q86SU0 546 aaPredicted RBP14.26□□□□□ -0.13
CCNE2-202ENST00000396133 METRNQ9UJH8 293 aa14.26□□□□□ -0.13
CCNE2-202ENST00000396133 C7P10643 843 aa14.24□□□□□ -0.13
CCNE2-202ENST00000396133 BRPF1P55201 1214 aaPredicted RBP14.24□□□□□ -0.13
CCNE2-202ENST00000396133 SLC39A7Q92504 469 aa14.24□□□□□ -0.13
CCNE2-202ENST00000396133 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.24□□□□□ -0.13
CCNE2-202ENST00000396133 ATN1P54259 1190 aaPredicted RBP14.22□□□□□ -0.13
CCNE2-202ENST00000396133 BMP2KQ9NSY1 1161 aaPredicted RBP14.22□□□□□ -0.13
CCNE2-202ENST00000396133 PPP1R15BQ5SWA1 713 aa14.22□□□□□ -0.13
CCNE2-202ENST00000396133 POTEJP0CG39 1038 aa14.19□□□□□ -0.14
CCNE2-202ENST00000396133 SLC24A3Q9HC58 644 aa14.19□□□□□ -0.14
CCNE2-202ENST00000396133 GPHNQ9NQX3 736 aaPredicted RBP14.19□□□□□ -0.14
CCNE2-202ENST00000396133 TRIM35Q9UPQ4 493 aa14.19□□□□□ -0.14
CCNE2-202ENST00000396133 ZMYND10O75800 440 aa14.16□□□□□ -0.14
CCNE2-202ENST00000396133 NEUROD2Q15784 382 aa14.14□□□□□ -0.15
CCNE2-202ENST00000396133 ERICH6Q7L0X2 663 aa14.12□□□□□ -0.15
CCNE2-202ENST00000396133 MICALL2Q8IY33 904 aa14.12□□□□□ -0.15
CCNE2-202ENST00000396133 MLLT3P42568 568 aaPredicted RBP14.1□□□□□ -0.15
CCNE2-202ENST00000396133 POTEFA5A3E0 1075 aa14.09□□□□□ -0.15
CCNE2-202ENST00000396133 DSG2Q14126 1118 aa14.09□□□□□ -0.15
CCNE2-202ENST00000396133 DPY19L2Q6NUT2 758 aa14.09□□□□□ -0.15
CCNE2-202ENST00000396133 GPIHBP1Q8IV16 184 aa14.09□□□□□ -0.15
CCNE2-202ENST00000396133 PDCD7Q8N8D1 485 aaKnown RBP14.09□□□□□ -0.15
CCNE2-202ENST00000396133 EMILIN3Q9NT22 766 aa14.09□□□□□ -0.15
CCNE2-202ENST00000396133 DPYSL4O14531 572 aa14.08□□□□□ -0.16
CCNE2-202ENST00000396133 BARGINQ6ZT62 677 aa14.08□□□□□ -0.16
CCNE2-202ENST00000396133 PDIA6Q15084 440 aa14.07□□□□□ -0.16
CCNE2-202ENST00000396133 RBM26Q5T8P6 1007 aaKnown RBP14.07□□□□□ -0.16
CCNE2-202ENST00000396133 TMC2Q8TDI7 906 aa14.07□□□□□ -0.16
CCNE2-202ENST00000396133 SPDYE16A6NNV3 312 aaPredicted RBP14.04□□□□□ -0.16
CCNE2-202ENST00000396133 FOXK1P85037 733 aa14.04□□□□□ -0.16
CCNE2-202ENST00000396133 MAMSTRQ6ZN01 415 aa14.04□□□□□ -0.16
CCNE2-202ENST00000396133 IRX5P78411 483 aaPredicted RBP13.99□□□□□ -0.17
CCNE2-202ENST00000396133 IER5LQ5T953 404 aa13.98□□□□□ -0.17
CCNE2-202ENST00000396133 COLQQ9Y215 455 aaPredicted RBP13.98□□□□□ -0.17
CCNE2-202ENST00000396133 TMEM121BQ9BXQ6 578 aaPredicted RBP13.97□□□□□ -0.17
CCNE2-202ENST00000396133 BOLA1Q9Y3E2 137 aa13.97□□□□□ -0.17
CCNE2-202ENST00000396133 C14orf37Q86TY3 774 aa13.96□□□□□ -0.17
CCNE2-202ENST00000396133 AK7Q96M32 723 aa13.96□□□□□ -0.17
CCNE2-202ENST00000396133 POTEMA6NI47 508 aa13.96□□□□□ -0.18
CCNE2-202ENST00000396133 PLPP6Q8IY26 295 aa13.96□□□□□ -0.18
CCNE2-202ENST00000396133 OCEL1Q9H607 264 aa13.96□□□□□ -0.18
CCNE2-202ENST00000396133 C2orf72A6NCS6 295 aa13.95□□□□□ -0.18
CCNE2-202ENST00000396133 G3V3G9 751 aa13.95□□□□□ -0.18
CCNE2-202ENST00000396133 SCUBE2Q9NQ36 999 aa13.95□□□□□ -0.18
CCNE2-202ENST00000396133 KIF3CO14782 793 aa13.94□□□□□ -0.18
CCNE2-202ENST00000396133 SEC24BO95487 1268 aa13.92□□□□□ -0.18
CCNE2-202ENST00000396133 POTEGQ6S5H5 508 aa13.92□□□□□ -0.18
CCNE2-202ENST00000396133 KRI1Q8N9T8 703 aaKnown RBP13.92□□□□□ -0.18
CCNE2-202ENST00000396133 PLCG2P16885 1265 aa13.9□□□□□ -0.18
CCNE2-202ENST00000396133 PLSCR2Q9NRY7 297 aa13.9□□□□□ -0.18
CCNE2-202ENST00000396133 GPR37O15354 613 aa13.89□□□□□ -0.19
CCNE2-202ENST00000396133 LCE2DQ5TA82 110 aaPredicted RBP13.87□□□□□ -0.19
CCNE2-202ENST00000396133 GPBP1L1Q9HC44 474 aaPredicted RBP13.87□□□□□ -0.19
CCNE2-202ENST00000396133 MAP3K9P80192 1104 aa13.84□□□□□ -0.19
CCNE2-202ENST00000396133 TRIM66O15016 1216 aa13.83□□□□□ -0.2
CCNE2-202ENST00000396133 UPF1Q92900 1129 aaKnown RBP eCLIP13.83□□□□□ -0.2
CCNE2-202ENST00000396133 L3MBTL3Q96JM7 780 aaPredicted RBP13.83□□□□□ -0.2
CCNE2-202ENST00000396133 GRXCR2A6NFK2 248 aa13.82□□□□□ -0.2
CCNE2-202ENST00000396133 KDM4CQ9H3R0 1056 aa13.82□□□□□ -0.2
CCNE2-202ENST00000396133 FAM163AQ96GL9 167 aaPredicted RBP13.81□□□□□ -0.2
CCNE2-202ENST00000396133 DAXXQ9UER7 740 aaPredicted RBP13.81□□□□□ -0.2
CCNE2-202ENST00000396133 PDE4DQ08499 809 aa13.8□□□□□ -0.2
CCNE2-202ENST00000396133 TMEM92Q6UXU6 159 aa13.79□□□□□ -0.2
CCNE2-202ENST00000396133 OXER1Q8TDS5 423 aa13.79□□□□□ -0.2
CCNE2-202ENST00000396133 NUTM2FA1L443 756 aa13.77□□□□□ -0.21
CCNE2-202ENST00000396133 MAP2K5Q13163 448 aa13.75□□□□□ -0.21
CCNE2-202ENST00000396133 OSBPP22059 807 aa13.74□□□□□ -0.21
CCNE2-202ENST00000396133 PTGER2P43116 358 aa13.73□□□□□ -0.21
CCNE2-202ENST00000396133 CCDC102AQ96A19 550 aa13.73□□□□□ -0.21
CCNE2-202ENST00000396133 MINK1Q8N4C8 1332 aaPredicted RBP13.73□□□□□ -0.21
CCNE2-202ENST00000396133 PCDH10Q9P2E7 1040 aa13.72□□□□□ -0.21
CCNE2-202ENST00000396133 DDX12PQ92771 950 aa13.71□□□□□ -0.21
CCNE2-202ENST00000396133 IL27Q8NEV9 243 aa13.71□□□□□ -0.22
CCNE2-202ENST00000396133 ZNF316A6NFI3 1004 aaPredicted RBP13.7□□□□□ -0.22
CCNE2-202ENST00000396133 GNPATO15228 680 aa13.69□□□□□ -0.22
CCNE2-202ENST00000396133 FCHSD2O94868 740 aa13.69□□□□□ -0.22
CCNE2-202ENST00000396133 HIC1Q14526 733 aa13.69□□□□□ -0.22
CCNE2-202ENST00000396133 TBC1D12O60347 775 aa13.68□□□□□ -0.22
CCNE2-202ENST00000396133 EVI5O60447 810 aa13.67□□□□□ -0.22
CCNE2-202ENST00000396133 SLAIN1Q8ND83 568 aa13.67□□□□□ -0.22
CCNE2-202ENST00000396133 AMHR2Q16671 573 aa13.66□□□□□ -0.22
CCNE2-202ENST00000396133 ARXQ96QS3 562 aa13.66□□□□□ -0.22
CCNE2-202ENST00000396133 IRF6O14896 467 aa13.65□□□□□ -0.22
CCNE2-202ENST00000396133 C3orf67Q6ZVT6 689 aa13.64□□□□□ -0.23
CCNE2-202ENST00000396133 PRIM1P49642 420 aaKnown RBP13.63□□□□□ -0.23
CCNE2-202ENST00000396133 PARP9Q8IXQ6 854 aa13.62□□□□□ -0.23
CCNE2-202ENST00000396133 PTCD2Q8WV60 388 aaKnown RBP13.62□□□□□ -0.23
CCNE2-202ENST00000396133 FECHP22830 423 aa13.61□□□□□ -0.23
CCNE2-202ENST00000396133 FAM117AQ9C073 453 aa13.61□□□□□ -0.23
CCNE2-202ENST00000396133 PTGDRQ13258 359 aa13.6□□□□□ -0.23
CCNE2-202ENST00000396133 DDRGK1Q96HY6 314 aa13.59□□□□□ -0.23
CCNE2-202ENST00000396133 SLC34A2O95436 690 aa13.57□□□□□ -0.24
CCNE2-202ENST00000396133 ST18O60284 1047 aa13.56□□□□□ -0.24
CCNE2-202ENST00000396133 PLEKHG3A1L390 1219 aa13.55□□□□□ -0.24
CCNE2-202ENST00000396133 TTLL12Q14166 644 aaPredicted RBP13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms