RNA–Protein interactions for RNA: ENST00000395489.6

A1CF-206, Transcript of APOBEC1 complementation factor, humanhuman

TSL 2 BASIC

Gene A1CF, Length 9,517 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
A1CF-206ENST00000395489 GTPBP4Q9BZE4 634 aaKnown RBP8.18□□□□□ -1.1
A1CF-206ENST00000395489 DEF6Q9H4E7 631 aa8.18□□□□□ -1.1
A1CF-206ENST00000395489 CREBRFQ8IUR6 639 aa8.18□□□□□ -1.1
A1CF-206ENST00000395489 NEFHP12036 1026 aa8.17□□□□□ -1.1
A1CF-206ENST00000395489 FAM107BQ9H098 131 aa8.17□□□□□ -1.1
A1CF-206ENST00000395489 MCM5P33992 734 aa8.17□□□□□ -1.1
A1CF-206ENST00000395489 WRNQ14191 1432 aaPredicted RBP eCLIP8.16□□□□□ -1.1
A1CF-206ENST00000395489 TERF1P54274 439 aa8.16□□□□□ -1.1
A1CF-206ENST00000395489 ARGLU1Q9NWB6 273 aaPredicted RBP8.16□□□□□ -1.1
A1CF-206ENST00000395489 MAPK8IP3Q9UPT6 1336 aa8.16□□□□□ -1.1
A1CF-206ENST00000395489 TMC1Q8TDI8 760 aa8.15□□□□□ -1.1
A1CF-206ENST00000395489 FAM193AP78312 1265 aa8.15□□□□□ -1.1
A1CF-206ENST00000395489 GOLGA3Q08378 1498 aa8.15□□□□□ -1.11
A1CF-206ENST00000395489 PDE3BQ13370 1112 aa8.14□□□□□ -1.11
A1CF-206ENST00000395489 ZBED9Q6R2W3 1325 aa8.14□□□□□ -1.11
A1CF-206ENST00000395489 CENPJQ9HC77 1338 aaPredicted RBP8.14□□□□□ -1.11
A1CF-206ENST00000395489 ZNF622Q969S3 477 aaKnown RBP eCLIP8.14□□□□□ -1.11
A1CF-206ENST00000395489 SMAP1Q8IYB5 467 aaPredicted RBP8.14□□□□□ -1.11
A1CF-206ENST00000395489 CCDC173Q0VFZ6 552 aa8.14□□□□□ -1.11
A1CF-206ENST00000395489 ACBD3Q9H3P7 528 aa8.14□□□□□ -1.11
A1CF-206ENST00000395489 FGD1P98174 961 aa8.13□□□□□ -1.11
A1CF-206ENST00000395489 ZCCHC6Q5VYS8 1495 aaKnown RBP8.13□□□□□ -1.11
A1CF-206ENST00000395489 DYNC1I1O14576 645 aa8.13□□□□□ -1.11
A1CF-206ENST00000395489 CCDC39Q9UFE4 941 aa8.13□□□□□ -1.11
A1CF-206ENST00000395489 KIF16BQ96L93 1317 aa8.13□□□□□ -1.11
A1CF-206ENST00000395489 DDX10Q13206 875 aaKnown RBP8.13□□□□□ -1.11
A1CF-206ENST00000395489 EIF3AQ14152 1382 aaKnown RBP8.13□□□□□ -1.11
A1CF-206ENST00000395489 BBXQ8WY36 941 aaPredicted RBP8.12□□□□□ -1.11
A1CF-206ENST00000395489 PSMD1Q99460 953 aa8.12□□□□□ -1.11
A1CF-206ENST00000395489 KTN1Q86UP2 1357 aaKnown RBP8.11□□□□□ -1.11
A1CF-206ENST00000395489 FAM13BQ9NYF5 915 aa8.11□□□□□ -1.11
A1CF-206ENST00000395489 ROCK2O75116 1388 aaKnown RBP8.11□□□□□ -1.11
A1CF-206ENST00000395489 AK7Q96M32 723 aa8.11□□□□□ -1.11
A1CF-206ENST00000395489 RNF20Q5VTR2 975 aa8.11□□□□□ -1.11
A1CF-206ENST00000395489 PATL2C9JE40 543 aaKnown RBP8.11□□□□□ -1.11
A1CF-206ENST00000395489 SETSIPP0DME0 302 aa8.11□□□□□ -1.11
A1CF-206ENST00000395489 STK11IPQ8N1F8 1099 aa8.11□□□□□ -1.11
A1CF-206ENST00000395489 CEP164Q9UPV0 1460 aa8.11□□□□□ -1.11
A1CF-206ENST00000395489 RDXP35241 583 aaKnown RBP8.11□□□□□ -1.11
A1CF-206ENST00000395489 EIF4G2P78344 907 aaKnown RBP eCLIP8.11□□□□□ -1.11
A1CF-206ENST00000395489 PAIP2Q9BPZ3 127 aaKnown RBP8.1□□□□□ -1.11
A1CF-206ENST00000395489 KNSTRNQ9Y448 316 aa8.1□□□□□ -1.11
A1CF-206ENST00000395489 NINLQ9Y2I6 1382 aa8.1□□□□□ -1.11
A1CF-206ENST00000395489 BAZ1AQ9NRL2 1556 aaPredicted RBP8.1□□□□□ -1.11
A1CF-206ENST00000395489 TULP1O00294 542 aaPredicted RBP8.1□□□□□ -1.11
A1CF-206ENST00000395489 TNIKQ9UKE5 1360 aa8.1□□□□□ -1.11
A1CF-206ENST00000395489 CEP162Q5TB80 1403 aa8.1□□□□□ -1.11
A1CF-206ENST00000395489 CLCN1P35523 988 aa8.09□□□□□ -1.11
A1CF-206ENST00000395489 HSP90AB1P08238 724 aaKnown RBP8.09□□□□□ -1.11
A1CF-206ENST00000395489 HS1BP3Q53T59 392 aa8.09□□□□□ -1.11
A1CF-206ENST00000395489 TPM4P67936 248 aa8.09□□□□□ -1.11
A1CF-206ENST00000395489 IPO4Q8TEX9 1081 aaKnown RBP8.09□□□□□ -1.12
A1CF-206ENST00000395489 CLIP1P30622 1438 aa8.08□□□□□ -1.12
A1CF-206ENST00000395489 FTSJ3Q8IY81 847 aaKnown RBP8.08□□□□□ -1.12
A1CF-206ENST00000395489 PLCD4Q9BRC7 762 aa8.08□□□□□ -1.12
A1CF-206ENST00000395489 RBM10P98175 930 aaKnown RBP8.08□□□□□ -1.12
A1CF-206ENST00000395489 FAM161AQ3B820 660 aa8.07□□□□□ -1.12
A1CF-206ENST00000395489 ATP6V1DQ9Y5K8 247 aa8.07□□□□□ -1.12
A1CF-206ENST00000395489 ESPNB1AK53 854 aa8.07□□□□□ -1.12
A1CF-206ENST00000395489 TIGD1Q96MW7 591 aa8.07□□□□□ -1.12
A1CF-206ENST00000395489 IL27Q8NEV9 243 aa8.07□□□□□ -1.12
A1CF-206ENST00000395489 CCP110O43303 1012 aa8.07□□□□□ -1.12
A1CF-206ENST00000395489 FAM9BQ8IZU0 186 aa8.06□□□□□ -1.12
A1CF-206ENST00000395489 CENPQQ7L2Z9 268 aaPredicted RBP8.06□□□□□ -1.12
A1CF-206ENST00000395489 HSPA5P11021 654 aaKnown RBP8.06□□□□□ -1.12
A1CF-206ENST00000395489 NAP1L2Q9ULW6 460 aaPredicted RBP8.06□□□□□ -1.12
A1CF-206ENST00000395489 LIG1P18858 919 aa8.06□□□□□ -1.12
A1CF-206ENST00000395489 NGEFQ8N5V2 710 aa8.06□□□□□ -1.12
A1CF-206ENST00000395489 DDX11Q96FC9 970 aa8.06□□□□□ -1.12
A1CF-206ENST00000395489 HMMRO75330 724 aa8.06□□□□□ -1.12
A1CF-206ENST00000395489 ZSCAN30Q86W11 494 aa8.05□□□□□ -1.12
A1CF-206ENST00000395489 KIF2AO00139 706 aaPredicted RBP8.05□□□□□ -1.12
A1CF-206ENST00000395489 LEKR1Q6ZMV7 388 aa8.05□□□□□ -1.12
A1CF-206ENST00000395489 INCENPQ9NQS7 918 aa8.05□□□□□ -1.12
A1CF-206ENST00000395489 SARNPP82979 210 aaKnown RBP8.04□□□□□ -1.12
A1CF-206ENST00000395489 RB1CC1Q8TDY2 1594 aa8.04□□□□□ -1.12
A1CF-206ENST00000395489 PRIMPOLQ96LW4 560 aa8.04□□□□□ -1.12
A1CF-206ENST00000395489 TPM1P09493 284 aa8.04□□□□□ -1.12
A1CF-206ENST00000395489 NFKBIBQ15653 356 aa8.04□□□□□ -1.12
A1CF-206ENST00000395489 HSP90B2PQ58FF3 399 aa8.04□□□□□ -1.12
A1CF-206ENST00000395489 MCCP23508 829 aa8.04□□□□□ -1.12
A1CF-206ENST00000395489 FAM184AQ8NB25 1140 aa8.04□□□□□ -1.12
A1CF-206ENST00000395489 ERCC4Q92889 916 aaPredicted RBP8.04□□□□□ -1.12
A1CF-206ENST00000395489 CCDC70Q6NSX1 233 aa8.04□□□□□ -1.12
A1CF-206ENST00000395489 POLR3GO15318 223 aaPredicted RBP8.03□□□□□ -1.12
A1CF-206ENST00000395489 WDR43Q15061 677 aaKnown RBP eCLIP8.03□□□□□ -1.12
A1CF-206ENST00000395489 KIAA1211Q6ZU35 1233 aa8.03□□□□□ -1.12
A1CF-206ENST00000395489 NUDCQ9Y266 331 aa8.03□□□□□ -1.12
A1CF-206ENST00000395489 NASPP49321 788 aaPredicted RBP8.03□□□□□ -1.12
A1CF-206ENST00000395489 NBPF1Q3BBV0 1214 aa8.03□□□□□ -1.12
A1CF-206ENST00000395489 DCTN1Q14203 1278 aa8.03□□□□□ -1.12
A1CF-206ENST00000395489 B4GALNT3Q6L9W6 998 aa8.03□□□□□ -1.12
A1CF-206ENST00000395489 UTP14CQ5TAP6 766 aaKnown RBP8.03□□□□□ -1.12
A1CF-206ENST00000395489 SLKQ9H2G2 1235 aaPredicted RBP8.03□□□□□ -1.12
A1CF-206ENST00000395489 CAGE1Q8TC20 777 aa8.03□□□□□ -1.12
A1CF-206ENST00000395489 VGFO15240 615 aaPredicted RBP8.03□□□□□ -1.12
A1CF-206ENST00000395489 GOLGA6L10A6NI86 522 aa8.02□□□□□ -1.13
A1CF-206ENST00000395489 TMX4Q9H1E5 349 aaPredicted RBP8.02□□□□□ -1.13
A1CF-206ENST00000395489 HAP1P54257 671 aaPredicted RBP8.02□□□□□ -1.13
A1CF-206ENST00000395489 CEP120Q8N960 986 aa8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms