RNA–Protein interactions for RNA: ENST00000395453.2

SCAF11-203, Transcript of SR-related CTD associated factor 11, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SCAF11, Length 1,336 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-203ENST00000395453 EHMT2Q96KQ7 1210 aa22.32■■□□□ 1.16
SCAF11-203ENST00000395453 ZMYM4Q5VZL5 1548 aa22.31■■□□□ 1.16
SCAF11-203ENST00000395453 ZFYVE16Q7Z3T8 1539 aa22.29■■□□□ 1.16
SCAF11-203ENST00000395453 MAGI2Q86UL8 1455 aa22.29■■□□□ 1.16
SCAF11-203ENST00000395453 ARHGAP35Q9NRY4 1499 aa22.28■■□□□ 1.16
SCAF11-203ENST00000395453 YEATS2Q9ULM3 1422 aa22.28■■□□□ 1.16
SCAF11-203ENST00000395453 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.28■■□□□ 1.161e-6■■■■□ 23.9
SCAF11-203ENST00000395453 MLECQ14165 292 aa22.28■■□□□ 1.16
SCAF11-203ENST00000395453 FMN1Q68DA7 1419 aa22.24■■□□□ 1.15
SCAF11-203ENST00000395453 SIGLEC1Q9BZZ2 1709 aa22.23■■□□□ 1.15
SCAF11-203ENST00000395453 TTC37Q6PGP7 1564 aa22.22■■□□□ 1.15
SCAF11-203ENST00000395453 FER1L4A9Z1Z3 1794 aa22.22■■□□□ 1.15
SCAF11-203ENST00000395453 HECW1Q76N89 1606 aa22.2■■□□□ 1.15
SCAF11-203ENST00000395453 CDK13Q14004 1512 aaKnown RBP22.2■■□□□ 1.15
SCAF11-203ENST00000395453 SCAPERQ9BY12 1400 aa22.19■■□□□ 1.14
SCAF11-203ENST00000395453 DMRT2Q9Y5R5 561 aa22.18■■□□□ 1.14
SCAF11-203ENST00000395453 DISP3Q9P2K9 1392 aa22.17■■□□□ 1.14
SCAF11-203ENST00000395453 ARHGEF12Q9NZN5 1544 aa22.16■■□□□ 1.14
SCAF11-203ENST00000395453 PLCH2O75038 1416 aa22.16■■□□□ 1.14
SCAF11-203ENST00000395453 ATP10AO60312 1499 aa22.16■■□□□ 1.14
SCAF11-203ENST00000395453 C9orf84Q5VXU9 1444 aa22.14■■□□□ 1.14
SCAF11-203ENST00000395453 PREX1Q8TCU6 1659 aa22.14■■□□□ 1.13
SCAF11-203ENST00000395453 ATP1B4Q9UN42 357 aaPredicted RBP22.13■■□□□ 1.13
SCAF11-203ENST00000395453 SOCS7O14512 581 aa22.12■■□□□ 1.13
SCAF11-203ENST00000395453 CEBPAP49715 358 aaPredicted RBP22.12■■□□□ 1.13
SCAF11-203ENST00000395453 ILDR2Q71H61 639 aa22.12■■□□□ 1.13
SCAF11-203ENST00000395453 EFCAB2Q5VUJ9 269 aa22.11■■□□□ 1.13
SCAF11-203ENST00000395453 CDK11AQ9UQ88 783 aaPredicted RBP22.1■■□□□ 1.13
SCAF11-203ENST00000395453 UHRF1BP1Q6BDS2 1440 aa22.08■■□□□ 1.12
SCAF11-203ENST00000395453 SCAF1Q9H7N4 1312 aaKnown RBP22.07■■□□□ 1.12
SCAF11-203ENST00000395453 MAPK8IP2Q13387 824 aaPredicted RBP22.06■■□□□ 1.12
SCAF11-203ENST00000395453 SETD1BQ9UPS6 1966 aaKnown RBP22.06■■□□□ 1.12
SCAF11-203ENST00000395453 LRRIQ1Q96JM4 1722 aa22.06■■□□□ 1.12
SCAF11-203ENST00000395453 STRCQ7RTU9 1775 aa22.05■■□□□ 1.12
SCAF11-203ENST00000395453 CASKIN1Q8WXD9 1431 aa22.04■■□□□ 1.12
SCAF11-203ENST00000395453 ZNF518AQ6AHZ1 1483 aa22.03■■□□□ 1.12
SCAF11-203ENST00000395453 TROQ12816 1431 aaPredicted RBP22.03■■□□□ 1.12
SCAF11-203ENST00000395453 MYO5CQ9NQX4 1742 aa22.01■■□□□ 1.11
SCAF11-203ENST00000395453 PTPRTO14522 1441 aa22.01■■□□□ 1.11
SCAF11-203ENST00000395453 KIF14Q15058 1648 aa22■■□□□ 1.11
SCAF11-203ENST00000395453 MYT1LQ9UL68 1186 aa22■■□□□ 1.11
SCAF11-203ENST00000395453 AFAP1Q8N556 730 aa21.99■■□□□ 1.11
SCAF11-203ENST00000395453 CLIP1P30622 1438 aa21.97■■□□□ 1.11
SCAF11-203ENST00000395453 CCDC18Q5T9S5 1454 aa21.97■■□□□ 1.11
SCAF11-203ENST00000395453 KDM5CP41229 1560 aa21.97■■□□□ 1.11
SCAF11-203ENST00000395453 ESF1Q9H501 851 aaKnown RBP21.96■■□□□ 1.11
SCAF11-203ENST00000395453 SPATA31D1Q6ZQQ2 1576 aa21.95■■□□□ 1.1
SCAF11-203ENST00000395453 ARHGAP5Q13017 1502 aa21.95■■□□□ 1.1
SCAF11-203ENST00000395453 REREQ9P2R6 1566 aa21.94■■□□□ 1.1
SCAF11-203ENST00000395453 FYCO1Q9BQS8 1478 aa21.93■■□□□ 1.1
SCAF11-203ENST00000395453 DIP2CQ9Y2E4 1556 aa21.92■■□□□ 1.1
SCAF11-203ENST00000395453 TRAPPC8Q9Y2L5 1435 aa21.91■■□□□ 1.1
SCAF11-203ENST00000395453 IQSEC2Q5JU85 1478 aa21.9■■□□□ 1.1
SCAF11-203ENST00000395453 MLH3Q9UHC1 1453 aa21.9■■□□□ 1.1
SCAF11-203ENST00000395453 C3P01024 1663 aa21.9■■□□□ 1.1
SCAF11-203ENST00000395453 LTBP4Q8N2S1 1624 aa21.89■■□□□ 1.09
SCAF11-203ENST00000395453 AGLP35573 1532 aa21.88■■□□□ 1.09
SCAF11-203ENST00000395453 CDC42BPBQ9Y5S2 1711 aa21.88■■□□□ 1.09
SCAF11-203ENST00000395453 ABCA6Q8N139 1617 aa21.86■■□□□ 1.09
SCAF11-203ENST00000395453 NCOA1Q15788 1441 aa21.85■■□□□ 1.09
SCAF11-203ENST00000395453 CNTLNQ9NXG0 1405 aa21.85■■□□□ 1.09
SCAF11-203ENST00000395453 PREX2Q70Z35 1606 aa21.83■■□□□ 1.08
SCAF11-203ENST00000395453 CDC42BPAQ5VT25 1732 aa21.79■■□□□ 1.08
SCAF11-203ENST00000395453 ABCC1P33527 1531 aa21.79■■□□□ 1.08
SCAF11-203ENST00000395453 NPATQ14207 1427 aa21.77■■□□□ 1.08
SCAF11-203ENST00000395453 CEP162Q5TB80 1403 aa21.77■■□□□ 1.07
SCAF11-203ENST00000395453 CAMSAP1Q5T5Y3 1602 aa21.76■■□□□ 1.07
SCAF11-203ENST00000395453 GPATCH8Q9UKJ3 1502 aaKnown RBP21.75■■□□□ 1.07
SCAF11-203ENST00000395453 KIDINS220Q9ULH0 1771 aa21.75■■□□□ 1.07
SCAF11-203ENST00000395453 ITSN2Q9NZM3 1697 aa21.74■■□□□ 1.07
SCAF11-203ENST00000395453 UBAP1LF5GYI3 381 aa21.74■■□□□ 1.07
SCAF11-203ENST00000395453 ZMYM3Q14202 1370 aa21.74■■□□□ 1.07
SCAF11-203ENST00000395453 NCKAP5LQ9HCH0 1330 aa21.72■■□□□ 1.07
SCAF11-203ENST00000395453 MROH2AA6NES4 1674 aa21.72■■□□□ 1.07
SCAF11-203ENST00000395453 ZNF335Q9H4Z2 1342 aaPredicted RBP21.71■■□□□ 1.07
SCAF11-203ENST00000395453 PKD2Q13563 968 aa21.7■■□□□ 1.06
SCAF11-203ENST00000395453 MTUS2Q5JR59 1369 aa21.69■■□□□ 1.06
SCAF11-203ENST00000395453 SAMD9LQ8IVG5 1584 aa21.68■■□□□ 1.06
SCAF11-203ENST00000395453 LOC105371045A0A1W2PR82 267 aa21.67■■□□□ 1.06
SCAF11-203ENST00000395453 ZNF777Q9ULD5 760 aaPredicted RBP21.67■■□□□ 1.06
SCAF11-203ENST00000395453 PLA2R1Q13018 1463 aa21.67■■□□□ 1.06
SCAF11-203ENST00000395453 SPAG9O60271 1321 aaKnown RBP21.67■■□□□ 1.06
SCAF11-203ENST00000395453 CCNB3Q8WWL7 1395 aa21.66■■□□□ 1.06
SCAF11-203ENST00000395453 CFDP1Q9UEE9 299 aaPredicted RBP21.66■■□□□ 1.06
SCAF11-203ENST00000395453 KIAA1107Q9UPP5 1409 aa21.65■■□□□ 1.06
SCAF11-203ENST00000395453 HNRNPMP52272 730 aaKnown RBP eCLIP21.64■■□□□ 1.05
SCAF11-203ENST00000395453 SYCP2Q9BX26 1530 aa21.63■■□□□ 1.05
SCAF11-203ENST00000395453 TCOF1Q13428 1488 aaKnown RBP21.62■■□□□ 1.05
SCAF11-203ENST00000395453 PLEKHH2Q8IVE3 1493 aa21.62■■□□□ 1.05
SCAF11-203ENST00000395453 EHBP1L1Q8N3D4 1523 aa21.62■■□□□ 1.05
SCAF11-203ENST00000395453 ZNF142P52746 1687 aaPredicted RBP21.61■■□□□ 1.05
SCAF11-203ENST00000395453 SUPT6HQ7KZ85 1726 aaKnown RBP21.61■■□□□ 1.05
SCAF11-203ENST00000395453 PTPRKQ15262 1439 aa21.6■■□□□ 1.05
SCAF11-203ENST00000395453 MYO3AQ8NEV4 1616 aa21.6■■□□□ 1.05
SCAF11-203ENST00000395453 TIAM1Q13009 1591 aa21.59■■□□□ 1.05
SCAF11-203ENST00000395453 CEP170BQ9Y4F5 1589 aaPredicted RBP21.59■■□□□ 1.05
SCAF11-203ENST00000395453 CLTCQ00610 1675 aaKnown RBP21.59■■□□□ 1.05
SCAF11-203ENST00000395453 A2MP01023 1474 aa21.58■■□□□ 1.04
SCAF11-203ENST00000395453 GGT6Q6P531 493 aa21.57■■□□□ 1.04
SCAF11-203ENST00000395453 ATP7AQ04656 1500 aa21.57■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms