RNA–Protein interactions for RNA: ENST00000395002.6

FAM13A-202, Transcript of family with sequence similarity 13 member A, humanhuman

TSL 1 (best) BASIC

Gene FAM13A, Length 4,945 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM13A-202ENST00000395002 VGFO15240 615 aaPredicted RBP11.33□□□□□ -0.6
FAM13A-202ENST00000395002 TNNT2P45379 298 aaPredicted RBP11.32□□□□□ -0.6
FAM13A-202ENST00000395002 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.32□□□□□ -0.6
FAM13A-202ENST00000395002 U2SURPO15042 1029 aaKnown RBP11.32□□□□□ -0.6
FAM13A-202ENST00000395002 HIRIP3Q9BW71 556 aaPredicted RBP11.31□□□□□ -0.6
FAM13A-202ENST00000395002 NUTM2DQ5VT03 806 aaPredicted RBP11.3□□□□□ -0.6
FAM13A-202ENST00000395002 KANK4Q5T7N3 995 aaPredicted RBP11.3□□□□□ -0.6
FAM13A-202ENST00000395002 ATF3P18847 181 aa11.3□□□□□ -0.6
FAM13A-202ENST00000395002 TERF2IPQ9NYB0 399 aa11.29□□□□□ -0.6
FAM13A-202ENST00000395002 POGZQ7Z3K3 1410 aa11.29□□□□□ -0.6
FAM13A-202ENST00000395002 PHF23Q9BUL5 403 aaPredicted RBP11.29□□□□□ -0.6
FAM13A-202ENST00000395002 MORC1Q86VD1 984 aa11.28□□□□□ -0.6
FAM13A-202ENST00000395002 TMX4Q9H1E5 349 aaPredicted RBP11.28□□□□□ -0.6
FAM13A-202ENST00000395002 RTF1Q92541 710 aaKnown RBP11.28□□□□□ -0.6
FAM13A-202ENST00000395002 MPHOSPH9Q99550 1183 aa11.28□□□□□ -0.6
FAM13A-202ENST00000395002 LAS1LQ9Y4W2 734 aaKnown RBP11.27□□□□□ -0.6
FAM13A-202ENST00000395002 SYNJ2O15056 1496 aa11.27□□□□□ -0.61
FAM13A-202ENST00000395002 EIF3AQ14152 1382 aaKnown RBP11.27□□□□□ -0.61
FAM13A-202ENST00000395002 NUTM2FA1L443 756 aa11.26□□□□□ -0.61
FAM13A-202ENST00000395002 EVA1CP58658 441 aa11.26□□□□□ -0.61
FAM13A-202ENST00000395002 SIN3AQ96ST3 1273 aa11.26□□□□□ -0.61
FAM13A-202ENST00000395002 TOPBP1Q92547 1522 aa11.26□□□□□ -0.61
FAM13A-202ENST00000395002 TIMELESSQ9UNS1 1208 aa11.26□□□□□ -0.61
FAM13A-202ENST00000395002 SETD5Q9C0A6 1442 aa11.26□□□□□ -0.61
FAM13A-202ENST00000395002 UACAQ9BZF9 1416 aa11.26□□□□□ -0.61
FAM13A-202ENST00000395002 NEUROD2Q15784 382 aa11.25□□□□□ -0.61
FAM13A-202ENST00000395002 THEMISQ8N1K5 641 aaPredicted RBP11.25□□□□□ -0.61
FAM13A-202ENST00000395002 LAMC3Q9Y6N6 1575 aa11.24□□□□□ -0.61
FAM13A-202ENST00000395002 CHMP4AQ9BY43 222 aa11.24□□□□□ -0.61
FAM13A-202ENST00000395002 SNAPC4Q5SXM2 1469 aa11.24□□□□□ -0.61
FAM13A-202ENST00000395002 UPF2Q9HAU5 1272 aaKnown RBP11.24□□□□□ -0.61
FAM13A-202ENST00000395002 DCAF8L1A6NGE4 600 aa11.23□□□□□ -0.61
FAM13A-202ENST00000395002 GOLGA2Q08379 1002 aa11.23□□□□□ -0.61
FAM13A-202ENST00000395002 FOXD1Q16676 465 aa11.23□□□□□ -0.61
FAM13A-202ENST00000395002 AMPHP49418 695 aa11.22□□□□□ -0.61
FAM13A-202ENST00000395002 CC2D1BQ5T0F9 858 aaKnown RBP11.21□□□□□ -0.62
FAM13A-202ENST00000395002 AFAP1Q8N556 730 aa11.21□□□□□ -0.62
FAM13A-202ENST00000395002 HSP90AA1P07900 732 aaKnown RBP11.2□□□□□ -0.62
FAM13A-202ENST00000395002 ROCK2O75116 1388 aaKnown RBP11.2□□□□□ -0.62
FAM13A-202ENST00000395002 POLA1P09884 1462 aaPredicted RBP11.2□□□□□ -0.62
FAM13A-202ENST00000395002 PROSER2Q86WR7 435 aaPredicted RBP11.2□□□□□ -0.62
FAM13A-202ENST00000395002 PSME1Q06323 249 aa11.2□□□□□ -0.62
FAM13A-202ENST00000395002 TRAK1Q9UPV9 953 aa11.2□□□□□ -0.62
FAM13A-202ENST00000395002 ZNF330Q9Y3S2 320 aaPredicted RBP11.2□□□□□ -0.62
FAM13A-202ENST00000395002 TXNDC2Q86VQ3 553 aa11.19□□□□□ -0.62
FAM13A-202ENST00000395002 CCDC144AA2RUR9 1427 aa11.19□□□□□ -0.62
FAM13A-202ENST00000395002 RTL5Q5HYW3 569 aaPredicted RBP11.19□□□□□ -0.62
FAM13A-202ENST00000395002 CHMP4BQ9H444 224 aaKnown RBP11.18□□□□□ -0.62
FAM13A-202ENST00000395002 ANKLE2Q86XL3 938 aa11.18□□□□□ -0.62
FAM13A-202ENST00000395002 MYOM3Q5VTT5 1437 aa11.17□□□□□ -0.62
FAM13A-202ENST00000395002 FTSJ3Q8IY81 847 aaKnown RBP11.16□□□□□ -0.62
FAM13A-202ENST00000395002 DMRT2Q9Y5R5 561 aa11.16□□□□□ -0.62
FAM13A-202ENST00000395002 BICRAQ9NZM4 1560 aa11.16□□□□□ -0.62
FAM13A-202ENST00000395002 RAPGEF3O95398 923 aa11.16□□□□□ -0.62
FAM13A-202ENST00000395002 LTV1Q96GA3 475 aaPredicted RBP11.15□□□□□ -0.62
FAM13A-202ENST00000395002 DNMBPQ6XZF7 1577 aa11.15□□□□□ -0.62
FAM13A-202ENST00000395002 CALD1Q05682 793 aaKnown RBP11.15□□□□□ -0.62
FAM13A-202ENST00000395002 OS9Q13438 667 aaPredicted RBP11.15□□□□□ -0.62
FAM13A-202ENST00000395002 MSH5O43196 834 aa11.14□□□□□ -0.63
FAM13A-202ENST00000395002 ARHGAP5Q13017 1502 aa11.14□□□□□ -0.63
FAM13A-202ENST00000395002 GTF2E1P29083 439 aaPredicted RBP11.14□□□□□ -0.63
FAM13A-202ENST00000395002 SF3B2Q13435 895 aaKnown RBP11.14□□□□□ -0.63
FAM13A-202ENST00000395002 KIF15Q9NS87 1388 aa11.14□□□□□ -0.63
FAM13A-202ENST00000395002 MS4A1P11836 297 aa11.13□□□□□ -0.63
FAM13A-202ENST00000395002 STAC3Q96MF2 364 aa11.13□□□□□ -0.63
FAM13A-202ENST00000395002 EVC2Q86UK5 1308 aa11.13□□□□□ -0.63
FAM13A-202ENST00000395002 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.12□□□□□ -0.63
FAM13A-202ENST00000395002 RUSC2Q8N2Y8 1516 aa11.12□□□□□ -0.63
FAM13A-202ENST00000395002 U2AF1L5P0DN76 240 aaPredicted RBP11.12□□□□□ -0.63
FAM13A-202ENST00000395002 U2AF1Q01081 240 aaKnown RBP eCLIP11.12□□□□□ -0.634e-6■■■■□ 20.8
FAM13A-202ENST00000395002 KIAA0586Q9BVV6 1533 aa11.12□□□□□ -0.63
FAM13A-202ENST00000395002 PRDM2Q13029 1718 aa11.12□□□□□ -0.63
FAM13A-202ENST00000395002 PLEKHH2Q8IVE3 1493 aa11.11□□□□□ -0.63
FAM13A-202ENST00000395002 COG3Q96JB2 828 aa11.11□□□□□ -0.63
FAM13A-202ENST00000395002 MAGI1Q96QZ7 1491 aaPredicted RBP11.11□□□□□ -0.63
FAM13A-202ENST00000395002 MINK1Q8N4C8 1332 aaPredicted RBP11.11□□□□□ -0.63
FAM13A-202ENST00000395002 G3V3G9 751 aa11.1□□□□□ -0.63
FAM13A-202ENST00000395002 DCAF8Q5TAQ9 597 aa11.1□□□□□ -0.63
FAM13A-202ENST00000395002 SCAPERQ9BY12 1400 aa11.1□□□□□ -0.63
FAM13A-202ENST00000395002 CCDC136Q96JN2 1154 aa11.1□□□□□ -0.63
FAM13A-202ENST00000395002 CD109Q6YHK3 1445 aa11.1□□□□□ -0.63
FAM13A-202ENST00000395002 RAB3GAP2Q9H2M9 1393 aa11.1□□□□□ -0.63
FAM13A-202ENST00000395002 PIP4K2BP78356 416 aa11.09□□□□□ -0.63
FAM13A-202ENST00000395002 DHX57Q6P158 1386 aaKnown RBP11.09□□□□□ -0.63
FAM13A-202ENST00000395002 SLC52A1Q9NWF4 448 aa11.09□□□□□ -0.63
FAM13A-202ENST00000395002 SYNJ1O43426 1573 aa11.07□□□□□ -0.64
FAM13A-202ENST00000395002 ZNF644Q9H582 1327 aaPredicted RBP11.07□□□□□ -0.64
FAM13A-202ENST00000395002 C1orf141Q5JVX7 400 aa11.07□□□□□ -0.64
FAM13A-202ENST00000395002 HDAC5Q9UQL6 1122 aa11.07□□□□□ -0.64
FAM13A-202ENST00000395002 L3MBTL2Q969R5 705 aa11.07□□□□□ -0.64
FAM13A-202ENST00000395002 GPRASP1Q5JY77 1395 aa11.07□□□□□ -0.64
FAM13A-202ENST00000395002 KTN1Q86UP2 1357 aaKnown RBP11.07□□□□□ -0.64
FAM13A-202ENST00000395002 EIF5BO60841 1220 aaKnown RBP11.06□□□□□ -0.64
FAM13A-202ENST00000395002 LMOD3Q0VAK6 560 aa11.06□□□□□ -0.64
FAM13A-202ENST00000395002 STK31Q9BXU1 1019 aa11.06□□□□□ -0.64
FAM13A-202ENST00000395002 HSPA5P11021 654 aaKnown RBP11.05□□□□□ -0.64
FAM13A-202ENST00000395002 ANP32AP39687 249 aaKnown RBP11.05□□□□□ -0.64
FAM13A-202ENST00000395002 SYTL4Q96C24 671 aaPredicted RBP11.05□□□□□ -0.64
FAM13A-202ENST00000395002 CASC1Q6TDU7 716 aa11.04□□□□□ -0.64
FAM13A-202ENST00000395002 CASKIN1Q8WXD9 1431 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms