RNA–Protein interactions for RNA: ENST00000394185.6

CLDND1-204, Transcript of claudin domain containing 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLDND1, Length 2,159 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-204ENST00000394185 KDM6BO15054 1643 aa26.29■■□□□ 1.8
CLDND1-204ENST00000394185 GCC2Q8IWJ2 1684 aa26.27■■□□□ 1.8
CLDND1-204ENST00000394185 AKNAQ7Z591 1439 aa26.26■■□□□ 1.79
CLDND1-204ENST00000394185 SIN3AQ96ST3 1273 aa26.26■■□□□ 1.79
CLDND1-204ENST00000394185 OSCARQ8IYS5 282 aa26.24■■□□□ 1.79
CLDND1-204ENST00000394185 UHRF1BP1LA0JNW5 1464 aa26.22■■□□□ 1.79
CLDND1-204ENST00000394185 ZCCHC11Q5TAX3 1644 aaKnown RBP26.22■■□□□ 1.79
CLDND1-204ENST00000394185 ROCK1Q13464 1354 aa26.2■■□□□ 1.78
CLDND1-204ENST00000394185 KDM5BQ9UGL1 1544 aa26.2■■□□□ 1.78
CLDND1-204ENST00000394185 TTC37Q6PGP7 1564 aa26.2■■□□□ 1.78
CLDND1-204ENST00000394185 NEUROD1Q13562 356 aa26.19■■□□□ 1.78
CLDND1-204ENST00000394185 KCNH8Q96L42 1107 aa26.19■■□□□ 1.78
CLDND1-204ENST00000394185 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP26.18■■□□□ 1.78
CLDND1-204ENST00000394185 ZNF316A6NFI3 1004 aaPredicted RBP26.16■■□□□ 1.78
CLDND1-204ENST00000394185 CDC42BPBQ9Y5S2 1711 aa26.15■■□□□ 1.78
CLDND1-204ENST00000394185 PREX2Q70Z35 1606 aa26.14■■□□□ 1.77
CLDND1-204ENST00000394185 CROCC2H7BZ55 1655 aa26.13■■□□□ 1.77
CLDND1-204ENST00000394185 TRIM52Q96A61 297 aa26.13■■□□□ 1.77
CLDND1-204ENST00000394185 DENND4BO75064 1496 aaPredicted RBP26.12■■□□□ 1.77
CLDND1-204ENST00000394185 HNRNPMP52272 730 aaKnown RBP eCLIP26.12■■□□□ 1.77
CLDND1-204ENST00000394185 NCOA1Q15788 1441 aa26.11■■□□□ 1.77
CLDND1-204ENST00000394185 SAMD9LQ8IVG5 1584 aa26.1■■□□□ 1.77
CLDND1-204ENST00000394185 MBD5Q9P267 1494 aa26.07■■□□□ 1.76
CLDND1-204ENST00000394185 ADGBQ8N7X0 1667 aa26.07■■□□□ 1.76
CLDND1-204ENST00000394185 ADGRL2O95490 1459 aa26.07■■□□□ 1.76
CLDND1-204ENST00000394185 ARHGAP5Q13017 1502 aa26.06■■□□□ 1.76
CLDND1-204ENST00000394185 C9orf84Q5VXU9 1444 aa26.05■■□□□ 1.76
CLDND1-204ENST00000394185 DIEXFQ68CQ4 756 aaKnown RBP26.03■■□□□ 1.76
CLDND1-204ENST00000394185 MPHOSPH9Q99550 1183 aa26.02■■□□□ 1.76
CLDND1-204ENST00000394185 MYO5CQ9NQX4 1742 aa26.02■■□□□ 1.76
CLDND1-204ENST00000394185 ANKRD30AQ9BXX3 1397 aa26.02■■□□□ 1.76
CLDND1-204ENST00000394185 SHANK2Q9UPX8 1470 aa26.02■■□□□ 1.76
CLDND1-204ENST00000394185 SYCP2Q9BX26 1530 aa26.01■■□□□ 1.75
CLDND1-204ENST00000394185 FOXD1Q16676 465 aa26■■□□□ 1.75
CLDND1-204ENST00000394185 ARHGEF5Q12774 1597 aa26■■□□□ 1.75
CLDND1-204ENST00000394185 TSPY4P0CV99 314 aa25.98■■□□□ 1.75
CLDND1-204ENST00000394185 TSPY10P0CW01 314 aa25.98■■□□□ 1.75
CLDND1-204ENST00000394185 CCDC141Q6ZP82 1450 aa25.97■■□□□ 1.75
CLDND1-204ENST00000394185 WDR7Q9Y4E6 1490 aa25.96■■□□□ 1.75
CLDND1-204ENST00000394185 PLCH2O75038 1416 aa25.96■■□□□ 1.75
CLDND1-204ENST00000394185 ANKRD50Q9ULJ7 1429 aa25.94■■□□□ 1.74
CLDND1-204ENST00000394185 ARHGEF12Q9NZN5 1544 aa25.93■■□□□ 1.74
CLDND1-204ENST00000394185 TIMELESSQ9UNS1 1208 aa25.91■■□□□ 1.74
CLDND1-204ENST00000394185 KIF15Q9NS87 1388 aa25.91■■□□□ 1.74
CLDND1-204ENST00000394185 ASXL2Q76L83 1435 aa25.91■■□□□ 1.74
CLDND1-204ENST00000394185 TONSLQ96HA7 1378 aa25.9■■□□□ 1.74
CLDND1-204ENST00000394185 SLC4A1APQ9BWU0 796 aaKnown RBP25.9■■□□□ 1.74
CLDND1-204ENST00000394185 PZPP20742 1482 aa25.9■■□□□ 1.74
CLDND1-204ENST00000394185 PPP1R15AO75807 674 aaPredicted RBP25.89■■□□□ 1.73
CLDND1-204ENST00000394185 KIAA1107Q9UPP5 1409 aa25.88■■□□□ 1.73
CLDND1-204ENST00000394185 RSPH4AQ5TD94 716 aa25.87■■□□□ 1.73
CLDND1-204ENST00000394185 EFCAB2Q5VUJ9 269 aa25.87■■□□□ 1.73
CLDND1-204ENST00000394185 PLEKHH2Q8IVE3 1493 aa25.84■■□□□ 1.73
CLDND1-204ENST00000394185 ANKRD30BQ9BXX2 1392 aa25.83■■□□□ 1.73
CLDND1-204ENST00000394185 ABCC1P33527 1531 aa25.82■■□□□ 1.72
CLDND1-204ENST00000394185 ACIN1Q9UKV3 1341 aaKnown RBP25.82■■□□□ 1.72
CLDND1-204ENST00000394185 TRAPPC8Q9Y2L5 1435 aa25.81■■□□□ 1.72
CLDND1-204ENST00000394185 ABCA9Q8IUA7 1624 aa25.8■■□□□ 1.72
CLDND1-204ENST00000394185 NPM1P06748 294 aaKnown RBP eCLIP25.8■■□□□ 1.72
CLDND1-204ENST00000394185 MAST1Q9Y2H9 1570 aa25.8■■□□□ 1.72
CLDND1-204ENST00000394185 NUP155O75694 1391 aa25.78■■□□□ 1.72
CLDND1-204ENST00000394185 ARAP3Q8WWN8 1544 aa25.77■■□□□ 1.72
CLDND1-204ENST00000394185 PKD2Q13563 968 aa25.75■■□□□ 1.71
CLDND1-204ENST00000394185 FANCAO15360 1455 aa25.75■■□□□ 1.71
CLDND1-204ENST00000394185 AFAP1Q8N556 730 aa25.74■■□□□ 1.71
CLDND1-204ENST00000394185 RPRD2Q5VT52 1461 aaKnown RBP25.72■■□□□ 1.71
CLDND1-204ENST00000394185 PLXNC1O60486 1568 aa25.72■■□□□ 1.71
CLDND1-204ENST00000394185 CYB5RLQ6IPT4 315 aa25.7■■□□□ 1.7
CLDND1-204ENST00000394185 KDM5DQ9BY66 1539 aa25.7■■□□□ 1.7
CLDND1-204ENST00000394185 L3MBTL2Q969R5 705 aa25.69■■□□□ 1.7
CLDND1-204ENST00000394185 HIRIP3Q9BW71 556 aaPredicted RBP25.69■■□□□ 1.7
CLDND1-204ENST00000394185 SPAG9O60271 1321 aaKnown RBP25.65■■□□□ 1.7
CLDND1-204ENST00000394185 MIER1Q8N108 512 aa25.65■■□□□ 1.7
CLDND1-204ENST00000394185 ADGRL1O94910 1474 aa25.65■■□□□ 1.7
CLDND1-204ENST00000394185 RIMBP3CA6NJZ7 1639 aa25.64■■□□□ 1.7
CLDND1-204ENST00000394185 RIMBP3BA6NNM3 1639 aa25.64■■□□□ 1.7
CLDND1-204ENST00000394185 RIMBP3Q9UFD9 1639 aa25.64■■□□□ 1.7
CLDND1-204ENST00000394185 TEX14Q8IWB6 1497 aa25.64■■□□□ 1.69
CLDND1-204ENST00000394185 DUOX2Q9NRD8 1548 aa25.63■■□□□ 1.69
CLDND1-204ENST00000394185 GRWD1Q9BQ67 446 aaKnown RBP eCLIP25.63■■□□□ 1.69
CLDND1-204ENST00000394185 ZFYVE16Q7Z3T8 1539 aa25.63■■□□□ 1.69
CLDND1-204ENST00000394185 FAM135AQ9P2D6 1515 aa25.63■■□□□ 1.69
CLDND1-204ENST00000394185 SCAPERQ9BY12 1400 aa25.63■■□□□ 1.69
CLDND1-204ENST00000394185 CD109Q6YHK3 1445 aa25.6■■□□□ 1.69
CLDND1-204ENST00000394185 UNC13BO14795 1591 aa25.6■■□□□ 1.69
CLDND1-204ENST00000394185 ERBINQ96RT1 1412 aa25.58■■□□□ 1.69
CLDND1-204ENST00000394185 RTEL1-TNFRSF6BF6WH68 1400 aa25.57■■□□□ 1.68
CLDND1-204ENST00000394185 NBPF8Q3BBV2 869 aa25.54■■□□□ 1.68
CLDND1-204ENST00000394185 INO80Q9ULG1 1556 aaPredicted RBP25.54■■□□□ 1.68
CLDND1-204ENST00000394185 ATP7AQ04656 1500 aa25.54■■□□□ 1.68
CLDND1-204ENST00000394185 MAGI2Q86UL8 1455 aa25.51■■□□□ 1.67
CLDND1-204ENST00000394185 MYT1LQ9UL68 1186 aa25.51■■□□□ 1.67
CLDND1-204ENST00000394185 IQGAP3Q86VI3 1631 aa25.5■■□□□ 1.67
CLDND1-204ENST00000394185 PLA2R1Q13018 1463 aa25.45■■□□□ 1.67
CLDND1-204ENST00000394185 ZNF518AQ6AHZ1 1483 aa25.45■■□□□ 1.66
CLDND1-204ENST00000394185 DDX10Q13206 875 aaKnown RBP25.44■■□□□ 1.66
CLDND1-204ENST00000394185 KIDINS220Q9ULH0 1771 aa25.43■■□□□ 1.66
CLDND1-204ENST00000394185 POGZQ7Z3K3 1410 aa25.42■■□□□ 1.66
CLDND1-204ENST00000394185 CFAP74Q9C0B2 1584 aa25.42■■□□□ 1.66
CLDND1-204ENST00000394185 HSPA5P11021 654 aaKnown RBP25.42■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms