RNA–Protein interactions for RNA: ENST00000393417.7

MDM2-213, Transcript of MDM2 proto-oncogene, humanhuman

TSL 5

Gene MDM2, Length 1,683 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM2-213ENST00000393417 YEATS2Q9ULM3 1422 aa12.62□□□□□ -0.39
MDM2-213ENST00000393417 ZFYVE16Q7Z3T8 1539 aa12.62□□□□□ -0.39
MDM2-213ENST00000393417 PLPPR3Q6T4P5 718 aa12.61□□□□□ -0.39
MDM2-213ENST00000393417 PCF11O94913 1555 aaKnown RBP12.6□□□□□ -0.39
MDM2-213ENST00000393417 CDC42BPBQ9Y5S2 1711 aa12.59□□□□□ -0.39
MDM2-213ENST00000393417 LMTK3Q96Q04 1460 aa12.58□□□□□ -0.4
MDM2-213ENST00000393417 POGZQ7Z3K3 1410 aa12.57□□□□□ -0.4
MDM2-213ENST00000393417 FMN1Q68DA7 1419 aa12.57□□□□□ -0.4
MDM2-213ENST00000393417 PLCH2O75038 1416 aa12.56□□□□□ -0.4
MDM2-213ENST00000393417 SCAPERQ9BY12 1400 aa12.56□□□□□ -0.4
MDM2-213ENST00000393417 MLECQ14165 292 aa12.55□□□□□ -0.4
MDM2-213ENST00000393417 ARHGAP5Q13017 1502 aa12.55□□□□□ -0.4
MDM2-213ENST00000393417 PREX2Q70Z35 1606 aa12.54□□□□□ -0.4
MDM2-213ENST00000393417 CDC42BPAQ5VT25 1732 aa12.54□□□□□ -0.4
MDM2-213ENST00000393417 ITSN2Q9NZM3 1697 aa12.53□□□□□ -0.4
MDM2-213ENST00000393417 ABCA6Q8N139 1617 aa12.52□□□□□ -0.41
MDM2-213ENST00000393417 TROQ12816 1431 aaPredicted RBP12.52□□□□□ -0.41
MDM2-213ENST00000393417 MAGI2Q86UL8 1455 aa12.51□□□□□ -0.41
MDM2-213ENST00000393417 HSPA2P54652 639 aa12.51□□□□□ -0.41
MDM2-213ENST00000393417 KDM5CP41229 1560 aa12.5□□□□□ -0.41
MDM2-213ENST00000393417 DIP2CQ9Y2E4 1556 aa12.5□□□□□ -0.41
MDM2-213ENST00000393417 PREX1Q8TCU6 1659 aa12.5□□□□□ -0.41
MDM2-213ENST00000393417 ARHGEF12Q9NZN5 1544 aa12.49□□□□□ -0.41
MDM2-213ENST00000393417 C9orf84Q5VXU9 1444 aa12.49□□□□□ -0.41
MDM2-213ENST00000393417 CLIP1P30622 1438 aa12.48□□□□□ -0.41
MDM2-213ENST00000393417 ATP10AO60312 1499 aa12.48□□□□□ -0.41
MDM2-213ENST00000393417 ZNF518AQ6AHZ1 1483 aa12.48□□□□□ -0.41
MDM2-213ENST00000393417 ABCC1P33527 1531 aa12.47□□□□□ -0.41
MDM2-213ENST00000393417 EFCAB2Q5VUJ9 269 aa12.47□□□□□ -0.41
MDM2-213ENST00000393417 C3P01024 1663 aa12.46□□□□□ -0.41
MDM2-213ENST00000393417 KIDINS220Q9ULH0 1771 aa12.46□□□□□ -0.41
MDM2-213ENST00000393417 AFAP1Q8N556 730 aa12.46□□□□□ -0.41
MDM2-213ENST00000393417 CDK11AQ9UQ88 783 aaPredicted RBP12.46□□□□□ -0.41
MDM2-213ENST00000393417 CASKIN1Q8WXD9 1431 aa12.45□□□□□ -0.42
MDM2-213ENST00000393417 CCDC18Q5T9S5 1454 aa12.45□□□□□ -0.42
MDM2-213ENST00000393417 MYT1LQ9UL68 1186 aa12.45□□□□□ -0.42
MDM2-213ENST00000393417 STRCQ7RTU9 1775 aa12.44□□□□□ -0.42
MDM2-213ENST00000393417 CEBPAP49715 358 aaPredicted RBP12.44□□□□□ -0.42
MDM2-213ENST00000393417 TRAPPC8Q9Y2L5 1435 aa12.44□□□□□ -0.42
MDM2-213ENST00000393417 SAMD9LQ8IVG5 1584 aa12.44□□□□□ -0.42
MDM2-213ENST00000393417 FYCO1Q9BQS8 1478 aa12.43□□□□□ -0.42
MDM2-213ENST00000393417 SUPT6HQ7KZ85 1726 aaKnown RBP12.43□□□□□ -0.42
MDM2-213ENST00000393417 FBXO41Q8TF61 875 aa12.42□□□□□ -0.42
MDM2-213ENST00000393417 REREQ9P2R6 1566 aa12.41□□□□□ -0.42
MDM2-213ENST00000393417 SYCP2Q9BX26 1530 aa12.41□□□□□ -0.42
MDM2-213ENST00000393417 SETD1BQ9UPS6 1966 aaKnown RBP12.39□□□□□ -0.43
MDM2-213ENST00000393417 MLH3Q9UHC1 1453 aa12.38□□□□□ -0.43
MDM2-213ENST00000393417 ZNF777Q9ULD5 760 aaPredicted RBP12.37□□□□□ -0.43
MDM2-213ENST00000393417 CLTCQ00610 1675 aaKnown RBP12.36□□□□□ -0.43
MDM2-213ENST00000393417 INO80Q9ULG1 1556 aaPredicted RBP12.35□□□□□ -0.43
MDM2-213ENST00000393417 GPATCH8Q9UKJ3 1502 aaKnown RBP12.35□□□□□ -0.43
MDM2-213ENST00000393417 AGLP35573 1532 aa12.35□□□□□ -0.43
MDM2-213ENST00000393417 UHRF1BP1Q6BDS2 1440 aa12.34□□□□□ -0.43
MDM2-213ENST00000393417 ATP7AQ04656 1500 aa12.34□□□□□ -0.43
MDM2-213ENST00000393417 TIAM1Q13009 1591 aa12.34□□□□□ -0.43
MDM2-213ENST00000393417 MROH2AA6NES4 1674 aa12.34□□□□□ -0.43
MDM2-213ENST00000393417 HNRNPMP52272 730 aaKnown RBP eCLIP12.32□□□□□ -0.44
MDM2-213ENST00000393417 ADGBQ8N7X0 1667 aa12.31□□□□□ -0.44
MDM2-213ENST00000393417 PLXNC1O60486 1568 aa12.31□□□□□ -0.44
MDM2-213ENST00000393417 MYO3AQ8NEV4 1616 aa12.3□□□□□ -0.44
MDM2-213ENST00000393417 CERKQ8TCT0 537 aa12.29□□□□□ -0.44
MDM2-213ENST00000393417 EHBP1L1Q8N3D4 1523 aa12.29□□□□□ -0.44
MDM2-213ENST00000393417 MTUS2Q5JR59 1369 aa12.29□□□□□ -0.44
MDM2-213ENST00000393417 CCNB3Q8WWL7 1395 aa12.29□□□□□ -0.44
MDM2-213ENST00000393417 ESF1Q9H501 851 aaKnown RBP12.29□□□□□ -0.44
MDM2-213ENST00000393417 SPAG9O60271 1321 aaKnown RBP12.28□□□□□ -0.44
MDM2-213ENST00000393417 ZNF142P52746 1687 aaPredicted RBP12.27□□□□□ -0.44
MDM2-213ENST00000393417 ZNF644Q9H582 1327 aaPredicted RBP12.27□□□□□ -0.45
MDM2-213ENST00000393417 CAMSAP1Q5T5Y3 1602 aa12.27□□□□□ -0.45
MDM2-213ENST00000393417 CEP162Q5TB80 1403 aa12.27□□□□□ -0.45
MDM2-213ENST00000393417 CFDP1Q9UEE9 299 aaPredicted RBP12.26□□□□□ -0.45
MDM2-213ENST00000393417 A2MP01023 1474 aa12.26□□□□□ -0.45
MDM2-213ENST00000393417 CNTLNQ9NXG0 1405 aa12.25□□□□□ -0.45
MDM2-213ENST00000393417 PLEKHH2Q8IVE3 1493 aa12.25□□□□□ -0.45
MDM2-213ENST00000393417 KIAA1107Q9UPP5 1409 aa12.24□□□□□ -0.45
MDM2-213ENST00000393417 NCOA1Q15788 1441 aa12.23□□□□□ -0.45
MDM2-213ENST00000393417 LTBP4Q8N2S1 1624 aa12.23□□□□□ -0.45
MDM2-213ENST00000393417 CEP170BQ9Y4F5 1589 aaPredicted RBP12.23□□□□□ -0.45
MDM2-213ENST00000393417 ZMYM3Q14202 1370 aa12.23□□□□□ -0.45
MDM2-213ENST00000393417 MBD5Q9P267 1494 aa12.22□□□□□ -0.45
MDM2-213ENST00000393417 CAMSAP2Q08AD1 1489 aa12.21□□□□□ -0.45
MDM2-213ENST00000393417 GGT6Q6P531 493 aa12.21□□□□□ -0.45
MDM2-213ENST00000393417 PTPRTO14522 1441 aa12.2□□□□□ -0.46
MDM2-213ENST00000393417 POLR1AO95602 1720 aaPredicted RBP12.2□□□□□ -0.46
MDM2-213ENST00000393417 LOC105371045A0A1W2PR82 267 aa12.2□□□□□ -0.46
MDM2-213ENST00000393417 NCOA2Q15596 1464 aa12.2□□□□□ -0.46
MDM2-213ENST00000393417 NPATQ14207 1427 aa12.2□□□□□ -0.46
MDM2-213ENST00000393417 DMRT2Q9Y5R5 561 aa12.19□□□□□ -0.46
MDM2-213ENST00000393417 PTPRKQ15262 1439 aa12.19□□□□□ -0.46
MDM2-213ENST00000393417 CFAP65Q6ZU64 1925 aaKnown RBP12.19□□□□□ -0.46
MDM2-213ENST00000393417 NCKAP5LQ9HCH0 1330 aa12.18□□□□□ -0.46
MDM2-213ENST00000393417 CCDC141Q6ZP82 1450 aa12.17□□□□□ -0.46
MDM2-213ENST00000393417 DNMT1P26358 1616 aaKnown RBP12.17□□□□□ -0.46
MDM2-213ENST00000393417 CEP152O94986 1710 aa12.15□□□□□ -0.46
MDM2-213ENST00000393417 ZNF335Q9H4Z2 1342 aaPredicted RBP12.14□□□□□ -0.47
MDM2-213ENST00000393417 KDM5DQ9BY66 1539 aa12.14□□□□□ -0.47
MDM2-213ENST00000393417 ARHGEF5Q12774 1597 aa12.14□□□□□ -0.47
MDM2-213ENST00000393417 SPATA31D1Q6ZQQ2 1576 aa12.14□□□□□ -0.47
MDM2-213ENST00000393417 TCOF1Q13428 1488 aaKnown RBP12.13□□□□□ -0.47
MDM2-213ENST00000393417 RTEL1-TNFRSF6BF6WH68 1400 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 117.6 ms