RNA–Protein interactions for RNA: ENST00000392066.7

ACSL3-202, Transcript of acyl-CoA synthetase long chain family member 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene ACSL3, Length 3,147 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACSL3-202ENST00000392066 CDK11AQ9UQ88 783 aaPredicted RBP21.46■■□□□ 1.03
ACSL3-202ENST00000392066 TRIM52Q96A61 297 aa21.43■■□□□ 1.02
ACSL3-202ENST00000392066 PTPRKQ15262 1439 aa21.43■■□□□ 1.02
ACSL3-202ENST00000392066 TCOF1Q13428 1488 aaKnown RBP21.42■■□□□ 1.02
ACSL3-202ENST00000392066 ANO8Q9HCE9 1232 aaPredicted RBP21.39■■□□□ 1.01
ACSL3-202ENST00000392066 PLEKHD1A6NEE1 506 aa21.39■■□□□ 1.01
ACSL3-202ENST00000392066 MIA2Q96PC5 1412 aa21.38■■□□□ 1.01
ACSL3-202ENST00000392066 ZCCHC11Q5TAX3 1644 aaKnown RBP21.37■■□□□ 1.01
ACSL3-202ENST00000392066 UHRF1BP1LA0JNW5 1464 aa21.37■■□□□ 1.01
ACSL3-202ENST00000392066 DEKP35659 375 aaKnown RBP21.37■■□□□ 1.01
ACSL3-202ENST00000392066 ABCC10Q5T3U5 1492 aa21.37■■□□□ 1.01
ACSL3-202ENST00000392066 GPATCH8Q9UKJ3 1502 aaKnown RBP21.36■■□□□ 1.01
ACSL3-202ENST00000392066 ZNF644Q9H582 1327 aaPredicted RBP21.35■■□□□ 1.01
ACSL3-202ENST00000392066 CDC42BPAQ5VT25 1732 aa21.35■■□□□ 1.01
ACSL3-202ENST00000392066 DHX57Q6P158 1386 aaKnown RBP21.35■■□□□ 1.01
ACSL3-202ENST00000392066 DDX10Q13206 875 aaKnown RBP21.34■■□□□ 1.01
ACSL3-202ENST00000392066 RAB3GAP2Q9H2M9 1393 aa21.34■■□□□ 1.01
ACSL3-202ENST00000392066 ITSN2Q9NZM3 1697 aa21.34■■□□□ 1.01
ACSL3-202ENST00000392066 KDM5BQ9UGL1 1544 aa21.33■■□□□ 1.01
ACSL3-202ENST00000392066 SETD5Q9C0A6 1442 aa21.31■■□□□ 1
ACSL3-202ENST00000392066 IRX6P78412 446 aaPredicted RBP21.31■■□□□ 1
ACSL3-202ENST00000392066 TTC37Q6PGP7 1564 aa21.28■■□□□ 1
ACSL3-202ENST00000392066 CAMSAP2Q08AD1 1489 aa21.27■■□□□ 1
ACSL3-202ENST00000392066 CFDP1Q9UEE9 299 aaPredicted RBP21.26■□□□□ 0.99
ACSL3-202ENST00000392066 DNMT1P26358 1616 aaKnown RBP21.25■□□□□ 0.99
ACSL3-202ENST00000392066 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.25■□□□□ 0.994e-6■■■□□ 15.9
ACSL3-202ENST00000392066 CDC42BPBQ9Y5S2 1711 aa21.24■□□□□ 0.99
ACSL3-202ENST00000392066 CHIC2Q9UKJ5 165 aa21.24■□□□□ 0.99
ACSL3-202ENST00000392066 FANCIQ9NVI1 1328 aa21.24■□□□□ 0.99
ACSL3-202ENST00000392066 HFM1A2PYH4 1435 aa21.24■□□□□ 0.99
ACSL3-202ENST00000392066 DAPK1P53355 1430 aa21.23■□□□□ 0.99
ACSL3-202ENST00000392066 ABCC5O15440 1437 aa21.23■□□□□ 0.99
ACSL3-202ENST00000392066 NBR1Q14596 966 aa21.22■□□□□ 0.99
ACSL3-202ENST00000392066 NAIPQ13075 1403 aa21.22■□□□□ 0.99
ACSL3-202ENST00000392066 ZNF777Q9ULD5 760 aaPredicted RBP21.22■□□□□ 0.99
ACSL3-202ENST00000392066 PREX2Q70Z35 1606 aa21.22■□□□□ 0.99
ACSL3-202ENST00000392066 HIRIP3Q9BW71 556 aaPredicted RBP21.2■□□□□ 0.98
ACSL3-202ENST00000392066 RRP7BPQ9NSQ0 103 aa21.18■□□□□ 0.98
ACSL3-202ENST00000392066 KDM6BO15054 1643 aa21.18■□□□□ 0.98
ACSL3-202ENST00000392066 GCC2Q8IWJ2 1684 aa21.17■□□□□ 0.98
ACSL3-202ENST00000392066 CROCC2H7BZ55 1655 aa21.16■□□□□ 0.98
ACSL3-202ENST00000392066 SAMD9LQ8IVG5 1584 aa21.16■□□□□ 0.98
ACSL3-202ENST00000392066 SALL2Q9Y467 1007 aaPredicted RBP21.15■□□□□ 0.98
ACSL3-202ENST00000392066 MYO5CQ9NQX4 1742 aa21.15■□□□□ 0.98
ACSL3-202ENST00000392066 CCDC136Q96JN2 1154 aa21.15■□□□□ 0.98
ACSL3-202ENST00000392066 MAPKBP1O60336 1514 aa21.15■□□□□ 0.98
ACSL3-202ENST00000392066 WDR7Q9Y4E6 1490 aa21.13■□□□□ 0.97
ACSL3-202ENST00000392066 AKNAQ7Z591 1439 aa21.12■□□□□ 0.97
ACSL3-202ENST00000392066 RIMBP3CA6NJZ7 1639 aa21.11■□□□□ 0.97
ACSL3-202ENST00000392066 RIMBP3BA6NNM3 1639 aa21.11■□□□□ 0.97
ACSL3-202ENST00000392066 RIMBP3Q9UFD9 1639 aa21.11■□□□□ 0.97
ACSL3-202ENST00000392066 ARHGAP5Q13017 1502 aa21.1■□□□□ 0.97
ACSL3-202ENST00000392066 ASXL2Q76L83 1435 aa21.1■□□□□ 0.97
ACSL3-202ENST00000392066 MBD5Q9P267 1494 aa21.09■□□□□ 0.97
ACSL3-202ENST00000392066 MYT1LQ9UL68 1186 aa21.09■□□□□ 0.97
ACSL3-202ENST00000392066 ROCK1Q13464 1354 aa21.08■□□□□ 0.97
ACSL3-202ENST00000392066 ADGBQ8N7X0 1667 aa21.08■□□□□ 0.97
ACSL3-202ENST00000392066 HNRNPMP52272 730 aaKnown RBP eCLIP21.08■□□□□ 0.963e-7■■■■■ 27.9
ACSL3-202ENST00000392066 SYCP2Q9BX26 1530 aa21.06■□□□□ 0.96
ACSL3-202ENST00000392066 RTN4Q9NQC3 1192 aaKnown RBP21.06■□□□□ 0.96
ACSL3-202ENST00000392066 PLCH2O75038 1416 aa21.06■□□□□ 0.96
ACSL3-202ENST00000392066 ARHGEF5Q12774 1597 aa21.05■□□□□ 0.96
ACSL3-202ENST00000392066 ANP32CO43423 234 aa21.04■□□□□ 0.96
ACSL3-202ENST00000392066 NCOA1Q15788 1441 aa21.04■□□□□ 0.96
ACSL3-202ENST00000392066 ADGRL2O95490 1459 aa21.04■□□□□ 0.96
ACSL3-202ENST00000392066 ABCA9Q8IUA7 1624 aa21.03■□□□□ 0.96
ACSL3-202ENST00000392066 ARHGEF12Q9NZN5 1544 aa21.02■□□□□ 0.96
ACSL3-202ENST00000392066 SHANK2Q9UPX8 1470 aa21.01■□□□□ 0.95
ACSL3-202ENST00000392066 C9orf84Q5VXU9 1444 aa21.01■□□□□ 0.95
ACSL3-202ENST00000392066 CYB5RLQ6IPT4 315 aa21.01■□□□□ 0.95
ACSL3-202ENST00000392066 DENND4BO75064 1496 aaPredicted RBP20.99■□□□□ 0.95
ACSL3-202ENST00000392066 CCDC141Q6ZP82 1450 aa20.99■□□□□ 0.95
ACSL3-202ENST00000392066 ZBTB4Q9P1Z0 1013 aaPredicted RBP20.98■□□□□ 0.95
ACSL3-202ENST00000392066 HNRNPUQ00839 825 aaKnown RBP eCLIP20.98■□□□□ 0.95
ACSL3-202ENST00000392066 NPM1P06748 294 aaKnown RBP eCLIP20.98■□□□□ 0.95
ACSL3-202ENST00000392066 PAK3O75914 559 aaPredicted RBP20.97■□□□□ 0.95
ACSL3-202ENST00000392066 ABCC1P33527 1531 aa20.96■□□□□ 0.95
ACSL3-202ENST00000392066 PPP1R15AO75807 674 aaPredicted RBP20.96■□□□□ 0.95
ACSL3-202ENST00000392066 SIN3AQ96ST3 1273 aa20.96■□□□□ 0.95
ACSL3-202ENST00000392066 ARAP3Q8WWN8 1544 aa20.95■□□□□ 0.95
ACSL3-202ENST00000392066 NOP58Q9Y2X3 529 aaKnown RBP20.95■□□□□ 0.94
ACSL3-202ENST00000392066 KIAA1107Q9UPP5 1409 aa20.95■□□□□ 0.94
ACSL3-202ENST00000392066 ANKRD30AQ9BXX3 1397 aa20.95■□□□□ 0.94
ACSL3-202ENST00000392066 IL27Q8NEV9 243 aa20.95■□□□□ 0.94
ACSL3-202ENST00000392066 EFCAB2Q5VUJ9 269 aa20.93■□□□□ 0.94
ACSL3-202ENST00000392066 PLEKHH2Q8IVE3 1493 aa20.92■□□□□ 0.94
ACSL3-202ENST00000392066 TSPY4P0CV99 314 aa20.92■□□□□ 0.94
ACSL3-202ENST00000392066 TSPY10P0CW01 314 aa20.92■□□□□ 0.94
ACSL3-202ENST00000392066 B4GALNT3Q6L9W6 998 aa20.92■□□□□ 0.94
ACSL3-202ENST00000392066 CCER2I3L3R5 266 aa20.91■□□□□ 0.94
ACSL3-202ENST00000392066 FANCAO15360 1455 aa20.91■□□□□ 0.94
ACSL3-202ENST00000392066 TRAPPC8Q9Y2L5 1435 aa20.91■□□□□ 0.94
ACSL3-202ENST00000392066 MAST1Q9Y2H9 1570 aa20.9■□□□□ 0.94
ACSL3-202ENST00000392066 ANKRD50Q9ULJ7 1429 aa20.89■□□□□ 0.93
ACSL3-202ENST00000392066 KIF15Q9NS87 1388 aa20.88■□□□□ 0.93
ACSL3-202ENST00000392066 RSPH4AQ5TD94 716 aa20.87■□□□□ 0.93
ACSL3-202ENST00000392066 RTL5Q5HYW3 569 aaPredicted RBP20.87■□□□□ 0.93
ACSL3-202ENST00000392066 MPHOSPH9Q99550 1183 aa20.85■□□□□ 0.93
ACSL3-202ENST00000392066 PZPP20742 1482 aa20.84■□□□□ 0.93
ACSL3-202ENST00000392066 PLXNC1O60486 1568 aa20.84■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms