RNA–Protein interactions for RNA: ENST00000381718.7

NUP58-201, Transcript of nucleoporin 58, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene NUP58, Length 2,489 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP58-201ENST00000381718 ZNF644Q9H582 1327 aaPredicted RBP23.55■■□□□ 1.36
NUP58-201ENST00000381718 CLASP1Q7Z460 1538 aa23.55■■□□□ 1.36
NUP58-201ENST00000381718 ACIN1Q9UKV3 1341 aaKnown RBP23.55■■□□□ 1.36
NUP58-201ENST00000381718 KDM6BO15054 1643 aa23.53■■□□□ 1.36
NUP58-201ENST00000381718 CFDP1Q9UEE9 299 aaPredicted RBP23.53■■□□□ 1.36
NUP58-201ENST00000381718 CDC42BPAQ5VT25 1732 aa23.5■■□□□ 1.35
NUP58-201ENST00000381718 DENND4BO75064 1496 aaPredicted RBP23.49■■□□□ 1.35
NUP58-201ENST00000381718 NEUROD1Q13562 356 aa23.49■■□□□ 1.35
NUP58-201ENST00000381718 ERCC6L2Q5T890 1561 aa23.48■■□□□ 1.35
NUP58-201ENST00000381718 ADGRL2O95490 1459 aa23.46■■□□□ 1.35
NUP58-201ENST00000381718 CROCC2H7BZ55 1655 aa23.46■■□□□ 1.35
NUP58-201ENST00000381718 ABCC2Q92887 1545 aa23.45■■□□□ 1.34
NUP58-201ENST00000381718 PPP1R15AO75807 674 aaPredicted RBP23.44■■□□□ 1.34
NUP58-201ENST00000381718 ADGBQ8N7X0 1667 aa23.43■■□□□ 1.34
NUP58-201ENST00000381718 NCOA1Q15788 1441 aa23.43■■□□□ 1.34
NUP58-201ENST00000381718 SHANK2Q9UPX8 1470 aa23.4■■□□□ 1.34
NUP58-201ENST00000381718 TONSLQ96HA7 1378 aa23.38■■□□□ 1.33
NUP58-201ENST00000381718 UHRF1BP1LA0JNW5 1464 aa23.37■■□□□ 1.33
NUP58-201ENST00000381718 MPHOSPH9Q99550 1183 aa23.37■■□□□ 1.33
NUP58-201ENST00000381718 TRIM52Q96A61 297 aa23.36■■□□□ 1.33
NUP58-201ENST00000381718 MIER1Q8N108 512 aa23.36■■□□□ 1.33
NUP58-201ENST00000381718 PREX2Q70Z35 1606 aa23.35■■□□□ 1.33
NUP58-201ENST00000381718 KDM5BQ9UGL1 1544 aa23.35■■□□□ 1.33
NUP58-201ENST00000381718 ARHGEF5Q12774 1597 aa23.35■■□□□ 1.33
NUP58-201ENST00000381718 ZNF777Q9ULD5 760 aaPredicted RBP23.35■■□□□ 1.33
NUP58-201ENST00000381718 ANKRD30AQ9BXX3 1397 aa23.33■■□□□ 1.32
NUP58-201ENST00000381718 CDC42BPBQ9Y5S2 1711 aa23.32■■□□□ 1.32
NUP58-201ENST00000381718 MBD5Q9P267 1494 aa23.31■■□□□ 1.32
NUP58-201ENST00000381718 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP23.29■■□□□ 1.32
NUP58-201ENST00000381718 SAMD9LQ8IVG5 1584 aa23.29■■□□□ 1.32
NUP58-201ENST00000381718 C9orf84Q5VXU9 1444 aa23.29■■□□□ 1.32
NUP58-201ENST00000381718 ANKRD30BQ9BXX2 1392 aa23.28■■□□□ 1.32
NUP58-201ENST00000381718 TTC37Q6PGP7 1564 aa23.27■■□□□ 1.32
NUP58-201ENST00000381718 PZPP20742 1482 aa23.27■■□□□ 1.32
NUP58-201ENST00000381718 ZCCHC11Q5TAX3 1644 aaKnown RBP23.26■■□□□ 1.31
NUP58-201ENST00000381718 ANKRD50Q9ULJ7 1429 aa23.24■■□□□ 1.31
NUP58-201ENST00000381718 RSPH4AQ5TD94 716 aa23.24■■□□□ 1.31
NUP58-201ENST00000381718 CCDC141Q6ZP82 1450 aa23.23■■□□□ 1.31
NUP58-201ENST00000381718 RPRD2Q5VT52 1461 aaKnown RBP23.22■■□□□ 1.31
NUP58-201ENST00000381718 TSPY4P0CV99 314 aa23.2■■□□□ 1.3
NUP58-201ENST00000381718 TSPY10P0CW01 314 aa23.2■■□□□ 1.3
NUP58-201ENST00000381718 SLC4A1APQ9BWU0 796 aaKnown RBP23.2■■□□□ 1.3
NUP58-201ENST00000381718 MYO5CQ9NQX4 1742 aa23.2■■□□□ 1.3
NUP58-201ENST00000381718 HNRNPMP52272 730 aaKnown RBP eCLIP23.19■■□□□ 1.3
NUP58-201ENST00000381718 KIAA1107Q9UPP5 1409 aa23.18■■□□□ 1.3
NUP58-201ENST00000381718 MAST1Q9Y2H9 1570 aa23.18■■□□□ 1.3
NUP58-201ENST00000381718 ARHGAP5Q13017 1502 aa23.18■■□□□ 1.3
NUP58-201ENST00000381718 KDM5DQ9BY66 1539 aa23.18■■□□□ 1.3
NUP58-201ENST00000381718 PLEKHH2Q8IVE3 1493 aa23.17■■□□□ 1.3
NUP58-201ENST00000381718 FOXD1Q16676 465 aa23.17■■□□□ 1.3
NUP58-201ENST00000381718 CENPBP07199 599 aaPredicted RBP23.16■■□□□ 1.3
NUP58-201ENST00000381718 PLCH2O75038 1416 aa23.15■■□□□ 1.3
NUP58-201ENST00000381718 SYCP2Q9BX26 1530 aa23.15■■□□□ 1.3
NUP58-201ENST00000381718 KIF15Q9NS87 1388 aa23.14■■□□□ 1.3
NUP58-201ENST00000381718 TEX14Q8IWB6 1497 aa23.13■■□□□ 1.29
NUP58-201ENST00000381718 L3MBTL2Q969R5 705 aa23.1■■□□□ 1.29
NUP58-201ENST00000381718 ARAP3Q8WWN8 1544 aa23.09■■□□□ 1.29
NUP58-201ENST00000381718 PLXNC1O60486 1568 aa23.07■■□□□ 1.28
NUP58-201ENST00000381718 KCNH8Q96L42 1107 aa23.07■■□□□ 1.28
NUP58-201ENST00000381718 NUP155O75694 1391 aa23.06■■□□□ 1.28
NUP58-201ENST00000381718 ARHGEF12Q9NZN5 1544 aa23.06■■□□□ 1.28
NUP58-201ENST00000381718 PKD2Q13563 968 aa23.04■■□□□ 1.28
NUP58-201ENST00000381718 WDR7Q9Y4E6 1490 aa23.04■■□□□ 1.28
NUP58-201ENST00000381718 ABCC1P33527 1531 aa23.03■■□□□ 1.28
NUP58-201ENST00000381718 EFCAB2Q5VUJ9 269 aa23.03■■□□□ 1.28
NUP58-201ENST00000381718 OSCARQ8IYS5 282 aa23.02■■□□□ 1.28
NUP58-201ENST00000381718 SCAF1Q9H7N4 1312 aaKnown RBP23.02■■□□□ 1.28
NUP58-201ENST00000381718 DDX10Q13206 875 aaKnown RBP23■■□□□ 1.27
NUP58-201ENST00000381718 HIRIP3Q9BW71 556 aaPredicted RBP23■■□□□ 1.27
NUP58-201ENST00000381718 UNC13BO14795 1591 aa22.99■■□□□ 1.27
NUP58-201ENST00000381718 DUOX2Q9NRD8 1548 aa22.96■■□□□ 1.27
NUP58-201ENST00000381718 FAM135AQ9P2D6 1515 aa22.96■■□□□ 1.27
NUP58-201ENST00000381718 ABCA9Q8IUA7 1624 aa22.96■■□□□ 1.27
NUP58-201ENST00000381718 YTHDC1Q96MU7 727 aaKnown RBP22.96■■□□□ 1.27
NUP58-201ENST00000381718 NBPF8Q3BBV2 869 aa22.94■■□□□ 1.26
NUP58-201ENST00000381718 ERBINQ96RT1 1412 aa22.94■■□□□ 1.26
NUP58-201ENST00000381718 EIF4G2P78344 907 aaKnown RBP eCLIP22.93■■□□□ 1.26
NUP58-201ENST00000381718 HSPA5P11021 654 aaKnown RBP22.92■■□□□ 1.26
NUP58-201ENST00000381718 MAGI2Q86UL8 1455 aa22.92■■□□□ 1.26
NUP58-201ENST00000381718 TRAPPC8Q9Y2L5 1435 aa22.92■■□□□ 1.26
NUP58-201ENST00000381718 RTEL1-TNFRSF6BF6WH68 1400 aa22.91■■□□□ 1.26
NUP58-201ENST00000381718 ASXL2Q76L83 1435 aa22.9■■□□□ 1.26
NUP58-201ENST00000381718 IQGAP3Q86VI3 1631 aa22.9■■□□□ 1.26
NUP58-201ENST00000381718 SPATA31E1Q6ZUB1 1445 aa22.89■■□□□ 1.25
NUP58-201ENST00000381718 UHRF1BP1Q6BDS2 1440 aa22.88■■□□□ 1.25
NUP58-201ENST00000381718 FANCAO15360 1455 aa22.86■■□□□ 1.25
NUP58-201ENST00000381718 ZFYVE16Q7Z3T8 1539 aa22.85■■□□□ 1.25
NUP58-201ENST00000381718 WASHC2AQ641Q2 1341 aa22.84■■□□□ 1.25
NUP58-201ENST00000381718 ATP10AO60312 1499 aa22.81■■□□□ 1.24
NUP58-201ENST00000381718 SPAG9O60271 1321 aaKnown RBP22.81■■□□□ 1.24
NUP58-201ENST00000381718 PLA2R1Q13018 1463 aa22.8■■□□□ 1.24
NUP58-201ENST00000381718 INO80Q9ULG1 1556 aaPredicted RBP22.8■■□□□ 1.24
NUP58-201ENST00000381718 CCER2I3L3R5 266 aa22.8■■□□□ 1.24
NUP58-201ENST00000381718 AFAP1Q8N556 730 aa22.79■■□□□ 1.24
NUP58-201ENST00000381718 ANP32CO43423 234 aa22.77■■□□□ 1.24
NUP58-201ENST00000381718 RALGAPBQ86X10 1494 aa22.77■■□□□ 1.24
NUP58-201ENST00000381718 ADGRL1O94910 1474 aa22.76■■□□□ 1.23
NUP58-201ENST00000381718 GTF3C3Q9Y5Q9 886 aa22.76■■□□□ 1.23
NUP58-201ENST00000381718 CCDC144AA2RUR9 1427 aa22.76■■□□□ 1.23
NUP58-201ENST00000381718 POLR1AO95602 1720 aaPredicted RBP22.75■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 107.1 ms