RNA–Protein interactions for RNA: ENST00000380025.8

NDEL1-202, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

TSL 5 BASIC

Gene NDEL1, Length 2,181 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-202ENST00000380025 CAMSAP2Q08AD1 1489 aa36.15■■■■□ 3.38
NDEL1-202ENST00000380025 MIER1Q8N108 512 aa36.12■■■■□ 3.37
NDEL1-202ENST00000380025 CFDP1Q9UEE9 299 aaPredicted RBP36.1■■■■□ 3.37
NDEL1-202ENST00000380025 PLEKHD1A6NEE1 506 aa36.09■■■■□ 3.37
NDEL1-202ENST00000380025 ABCC10Q5T3U5 1492 aa36.08■■■■□ 3.37
NDEL1-202ENST00000380025 CDC42BPAQ5VT25 1732 aa36.08■■■■□ 3.37
NDEL1-202ENST00000380025 DENND4BO75064 1496 aaPredicted RBP36.07■■■■□ 3.36
NDEL1-202ENST00000380025 PPP1R15AO75807 674 aaPredicted RBP36.02■■■■□ 3.36
NDEL1-202ENST00000380025 CROCC2H7BZ55 1655 aa36.02■■■■□ 3.36
NDEL1-202ENST00000380025 ERCC6L2Q5T890 1561 aa36■■■■□ 3.35
NDEL1-202ENST00000380025 ADGBQ8N7X0 1667 aa36■■■■□ 3.35
NDEL1-202ENST00000380025 TONSLQ96HA7 1378 aa36■■■■□ 3.35
NDEL1-202ENST00000380025 TRIM52Q96A61 297 aa35.99■■■■□ 3.35
NDEL1-202ENST00000380025 CLASP1Q7Z460 1538 aa35.96■■■■□ 3.35
NDEL1-202ENST00000380025 ZNF777Q9ULD5 760 aaPredicted RBP35.93■■■■□ 3.34
NDEL1-202ENST00000380025 ADGRL2O95490 1459 aa35.92■■■■□ 3.34
NDEL1-202ENST00000380025 ACIN1Q9UKV3 1341 aaKnown RBP35.92■■■■□ 3.34
NDEL1-202ENST00000380025 MPHOSPH9Q99550 1183 aa35.91■■■■□ 3.34
NDEL1-202ENST00000380025 NCOA1Q15788 1441 aa35.9■■■■□ 3.34
NDEL1-202ENST00000380025 KDM5BQ9UGL1 1544 aa35.88■■■■□ 3.33
NDEL1-202ENST00000380025 ABCC2Q92887 1545 aa35.86■■■■□ 3.33
NDEL1-202ENST00000380025 CENPBP07199 599 aaPredicted RBP35.82■■■■□ 3.33
NDEL1-202ENST00000380025 SHANK2Q9UPX8 1470 aa35.8■■■■□ 3.32
NDEL1-202ENST00000380025 PREX2Q70Z35 1606 aa35.8■■■■□ 3.32
NDEL1-202ENST00000380025 CDC42BPBQ9Y5S2 1711 aa35.78■■■■□ 3.32
NDEL1-202ENST00000380025 ANKRD30AQ9BXX3 1397 aa35.77■■■■□ 3.32
NDEL1-202ENST00000380025 ARHGEF5Q12774 1597 aa35.74■■■■□ 3.31
NDEL1-202ENST00000380025 SCAF1Q9H7N4 1312 aaKnown RBP35.73■■■■□ 3.31
NDEL1-202ENST00000380025 SAMD9LQ8IVG5 1584 aa35.72■■■■□ 3.31
NDEL1-202ENST00000380025 C9orf84Q5VXU9 1444 aa35.72■■■■□ 3.31
NDEL1-202ENST00000380025 FOXD1Q16676 465 aa35.72■■■■□ 3.31
NDEL1-202ENST00000380025 PZPP20742 1482 aa35.71■■■■□ 3.31
NDEL1-202ENST00000380025 ANKRD30BQ9BXX2 1392 aa35.71■■■■□ 3.31
NDEL1-202ENST00000380025 TTC37Q6PGP7 1564 aa35.71■■■■□ 3.31
NDEL1-202ENST00000380025 MBD5Q9P267 1494 aa35.68■■■■□ 3.3
NDEL1-202ENST00000380025 YTHDC1Q96MU7 727 aaKnown RBP35.68■■■■□ 3.3
NDEL1-202ENST00000380025 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP35.68■■■■□ 3.3
NDEL1-202ENST00000380025 SLC4A1APQ9BWU0 796 aaKnown RBP35.66■■■■□ 3.3
NDEL1-202ENST00000380025 UHRF1BP1LA0JNW5 1464 aa35.66■■■■□ 3.3
NDEL1-202ENST00000380025 ANKRD50Q9ULJ7 1429 aa35.65■■■■□ 3.3
NDEL1-202ENST00000380025 ZCCHC11Q5TAX3 1644 aaKnown RBP35.64■■■■□ 3.3
NDEL1-202ENST00000380025 RPRD2Q5VT52 1461 aaKnown RBP35.63■■■■□ 3.29
NDEL1-202ENST00000380025 HNRNPMP52272 730 aaKnown RBP eCLIP35.61■■■■□ 3.296e-7■■■■□ 23.7
NDEL1-202ENST00000380025 CCDC141Q6ZP82 1450 aa35.59■■■■□ 3.29
NDEL1-202ENST00000380025 MYO5CQ9NQX4 1742 aa35.59■■■■□ 3.29
NDEL1-202ENST00000380025 HIRIP3Q9BW71 556 aaPredicted RBP35.59■■■■□ 3.29
NDEL1-202ENST00000380025 TSPY4P0CV99 314 aa35.58■■■■□ 3.29
NDEL1-202ENST00000380025 TSPY10P0CW01 314 aa35.58■■■■□ 3.29
NDEL1-202ENST00000380025 ARHGAP5Q13017 1502 aa35.57■■■■□ 3.28
NDEL1-202ENST00000380025 L3MBTL2Q969R5 705 aa35.53■■■■□ 3.28
NDEL1-202ENST00000380025 SYCP2Q9BX26 1530 aa35.53■■■■□ 3.28
NDEL1-202ENST00000380025 TEX14Q8IWB6 1497 aa35.53■■■■□ 3.28
NDEL1-202ENST00000380025 DDX10Q13206 875 aaKnown RBP35.51■■■■□ 3.28
NDEL1-202ENST00000380025 KIF15Q9NS87 1388 aa35.51■■■■□ 3.28
NDEL1-202ENST00000380025 KIAA1107Q9UPP5 1409 aa35.51■■■■□ 3.27
NDEL1-202ENST00000380025 RSPH4AQ5TD94 716 aa35.49■■■■□ 3.27
NDEL1-202ENST00000380025 KDM5DQ9BY66 1539 aa35.48■■■■□ 3.27
NDEL1-202ENST00000380025 MAST1Q9Y2H9 1570 aa35.46■■■■□ 3.27
NDEL1-202ENST00000380025 KCNH8Q96L42 1107 aa35.44■■■■□ 3.26
NDEL1-202ENST00000380025 PLEKHH2Q8IVE3 1493 aa35.42■■■■□ 3.26
NDEL1-202ENST00000380025 PKD2Q13563 968 aa35.41■■■■□ 3.26
NDEL1-202ENST00000380025 NUP155O75694 1391 aa35.41■■■■□ 3.26
NDEL1-202ENST00000380025 PLCH2O75038 1416 aa35.39■■■■□ 3.26
NDEL1-202ENST00000380025 ARHGEF12Q9NZN5 1544 aa35.34■■■■□ 3.25
NDEL1-202ENST00000380025 PLXNC1O60486 1568 aa35.33■■■■□ 3.25
NDEL1-202ENST00000380025 HSPA5P11021 654 aaKnown RBP35.31■■■■□ 3.24
NDEL1-202ENST00000380025 NBPF8Q3BBV2 869 aa35.31■■■■□ 3.24
NDEL1-202ENST00000380025 GTF3C3Q9Y5Q9 886 aa35.31■■■■□ 3.24
NDEL1-202ENST00000380025 ABCC1P33527 1531 aa35.28■■■■□ 3.24
NDEL1-202ENST00000380025 EIF4G2P78344 907 aaKnown RBP eCLIP35.27■■■■□ 3.24
NDEL1-202ENST00000380025 EFCAB2Q5VUJ9 269 aa35.25■■■■□ 3.23
NDEL1-202ENST00000380025 UNC13BO14795 1591 aa35.24■■■■□ 3.23
NDEL1-202ENST00000380025 ARAP3Q8WWN8 1544 aa35.24■■■■□ 3.23
NDEL1-202ENST00000380025 FAM135AQ9P2D6 1515 aa35.24■■■■□ 3.23
NDEL1-202ENST00000380025 WDR7Q9Y4E6 1490 aa35.24■■■■□ 3.23
NDEL1-202ENST00000380025 DUOX2Q9NRD8 1548 aa35.17■■■■□ 3.22
NDEL1-202ENST00000380025 WASHC2AQ641Q2 1341 aa35.17■■■■□ 3.22
NDEL1-202ENST00000380025 TRAPPC8Q9Y2L5 1435 aa35.14■■■■□ 3.22
NDEL1-202ENST00000380025 ABCA9Q8IUA7 1624 aa35.12■■■■□ 3.21
NDEL1-202ENST00000380025 ANP32CO43423 234 aa35.12■■■■□ 3.21
NDEL1-202ENST00000380025 OSCARQ8IYS5 282 aa35.12■■■■□ 3.21
NDEL1-202ENST00000380025 SPATA31E1Q6ZUB1 1445 aa35.12■■■■□ 3.21
NDEL1-202ENST00000380025 IQGAP3Q86VI3 1631 aa35.1■■■■□ 3.21
NDEL1-202ENST00000380025 ERBINQ96RT1 1412 aa35.1■■■■□ 3.21
NDEL1-202ENST00000380025 MAGI2Q86UL8 1455 aa35.07■■■■□ 3.2
NDEL1-202ENST00000380025 CCER2I3L3R5 266 aa35.06■■■■□ 3.2
NDEL1-202ENST00000380025 UHRF1BP1Q6BDS2 1440 aa35.05■■■■□ 3.2
NDEL1-202ENST00000380025 ASXL2Q76L83 1435 aa35.04■■■■□ 3.2
NDEL1-202ENST00000380025 POLR1AO95602 1720 aaPredicted RBP35.03■■■■□ 3.2
NDEL1-202ENST00000380025 ZFYVE16Q7Z3T8 1539 aa35.01■■■■□ 3.2
NDEL1-202ENST00000380025 FANCAO15360 1455 aa35.01■■■■□ 3.19
NDEL1-202ENST00000380025 C11orf95C9JLR9 678 aaPredicted RBP35■■■■□ 3.19
NDEL1-202ENST00000380025 CCDC7Q96M83 1385 aa35■■■■□ 3.19
NDEL1-202ENST00000380025 RTEL1-TNFRSF6BF6WH68 1400 aa35■■■■□ 3.19
NDEL1-202ENST00000380025 GRWD1Q9BQ67 446 aaKnown RBP eCLIP34.98■■■■□ 3.191e-7■□□□□ 11.1
NDEL1-202ENST00000380025 SPAG9O60271 1321 aaKnown RBP34.96■■■■□ 3.19
NDEL1-202ENST00000380025 ZNF326Q5BKZ1 582 aaKnown RBP34.96■■■■□ 3.19
NDEL1-202ENST00000380025 PLA2R1Q13018 1463 aa34.96■■■■□ 3.19
NDEL1-202ENST00000380025 RALGAPBQ86X10 1494 aa34.96■■■■□ 3.19
NDEL1-202ENST00000380025 AFAP1Q8N556 730 aa34.95■■■■□ 3.19
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms