RNA–Protein interactions for RNA: ENST00000379802.7

DSP-201, Transcript of desmoplakin, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene DSP, Length 9,796 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DSP-201ENST00000379802 GORABQ5T7V8 394 aa12.92□□□□□ -0.34
DSP-201ENST00000379802 SYAP1Q96A49 352 aaPredicted RBP12.91□□□□□ -0.34
DSP-201ENST00000379802 SOX12O15370 315 aa12.91□□□□□ -0.34
DSP-201ENST00000379802 CSB-PGBD3P0DP91 1061 aa12.91□□□□□ -0.34
DSP-201ENST00000379802 TCEAL9Q9UHQ7 104 aa12.91□□□□□ -0.34
DSP-201ENST00000379802 SRPK2P78362 688 aaKnown RBP12.9□□□□□ -0.34
DSP-201ENST00000379802 CALD1Q05682 793 aaKnown RBP12.9□□□□□ -0.34
DSP-201ENST00000379802 CNKSR2Q8WXI2 1034 aa12.9□□□□□ -0.34
DSP-201ENST00000379802 CCDC9Q9Y3X0 531 aaKnown RBP12.89□□□□□ -0.35
DSP-201ENST00000379802 EIF4G1Q04637 1599 aaKnown RBP12.89□□□□□ -0.35
DSP-201ENST00000379802 TAF7LQ5H9L4 462 aa12.89□□□□□ -0.35
DSP-201ENST00000379802 HIRIP3Q9BW71 556 aaPredicted RBP12.88□□□□□ -0.35
DSP-201ENST00000379802 PAK3O75914 559 aaPredicted RBP12.87□□□□□ -0.35
DSP-201ENST00000379802 CHMP3Q9Y3E7 222 aa12.87□□□□□ -0.35
DSP-201ENST00000379802 SPAG9O60271 1321 aaKnown RBP12.87□□□□□ -0.35
DSP-201ENST00000379802 IPO8O15397 1037 aaKnown RBP12.86□□□□□ -0.35
DSP-201ENST00000379802 HSP90B1P14625 803 aaKnown RBP12.86□□□□□ -0.35
DSP-201ENST00000379802 HDAC5Q9UQL6 1122 aa12.86□□□□□ -0.35
DSP-201ENST00000379802 CC2D1BQ5T0F9 858 aaKnown RBP12.85□□□□□ -0.35
DSP-201ENST00000379802 AMER1Q5JTC6 1135 aaPredicted RBP12.85□□□□□ -0.35
DSP-201ENST00000379802 GBP4Q96PP9 640 aa12.85□□□□□ -0.35
DSP-201ENST00000379802 TPM3P06753 285 aa12.84□□□□□ -0.35
DSP-201ENST00000379802 GOLGA3Q08378 1498 aa12.84□□□□□ -0.35
DSP-201ENST00000379802 TNNT3P45378 269 aaPredicted RBP12.84□□□□□ -0.35
DSP-201ENST00000379802 MARCH6O60337 910 aa12.83□□□□□ -0.35
DSP-201ENST00000379802 CSPP1Q1MSJ5 1256 aa12.83□□□□□ -0.36
DSP-201ENST00000379802 TMF1P82094 1093 aa12.83□□□□□ -0.36
DSP-201ENST00000379802 MLECQ14165 292 aa12.83□□□□□ -0.36
DSP-201ENST00000379802 HDGFL2Q7Z4V5 671 aaPredicted RBP12.83□□□□□ -0.36
DSP-201ENST00000379802 MORC1Q86VD1 984 aa12.83□□□□□ -0.36
DSP-201ENST00000379802 EIF3AQ14152 1382 aaKnown RBP12.83□□□□□ -0.36
DSP-201ENST00000379802 NOP58Q9Y2X3 529 aaKnown RBP12.82□□□□□ -0.36
DSP-201ENST00000379802 CCNB3Q8WWL7 1395 aa12.81□□□□□ -0.36
DSP-201ENST00000379802 FRAT2O75474 233 aaPredicted RBP12.81□□□□□ -0.36
DSP-201ENST00000379802 GTF2E1P29083 439 aaPredicted RBP12.8□□□□□ -0.36
DSP-201ENST00000379802 TRIM34Q9BYJ4 488 aa12.8□□□□□ -0.36
DSP-201ENST00000379802 SETQ01105 290 aaPredicted RBP12.8□□□□□ -0.36
DSP-201ENST00000379802 CREBRFQ8IUR6 639 aa12.8□□□□□ -0.36
DSP-201ENST00000379802 BAZ1BQ9UIG0 1483 aaKnown RBP12.8□□□□□ -0.36
DSP-201ENST00000379802 PHF14O94880 888 aa12.8□□□□□ -0.36
DSP-201ENST00000379802 TSR1Q2NL82 804 aaKnown RBP12.79□□□□□ -0.36
DSP-201ENST00000379802 APBB1O00213 710 aa12.79□□□□□ -0.36
DSP-201ENST00000379802 STK31Q9BXU1 1019 aa12.79□□□□□ -0.36
DSP-201ENST00000379802 KIF3AQ9Y496 699 aa12.79□□□□□ -0.36
DSP-201ENST00000379802 CTDP1Q9Y5B0 961 aaPredicted RBP12.79□□□□□ -0.36
DSP-201ENST00000379802 KIF27Q86VH2 1401 aa12.78□□□□□ -0.36
DSP-201ENST00000379802 TPM2P07951 284 aa12.77□□□□□ -0.36
DSP-201ENST00000379802 SENP3-EIF4A1A0A087X0R7 540 aa12.77□□□□□ -0.36
DSP-201ENST00000379802 EEA1Q15075 1411 aa12.77□□□□□ -0.37
DSP-201ENST00000379802 PPP4R2Q9NY27 417 aa12.76□□□□□ -0.37
DSP-201ENST00000379802 CCDC70Q6NSX1 233 aa12.76□□□□□ -0.37
DSP-201ENST00000379802 SPRYD3Q8NCJ5 442 aa12.76□□□□□ -0.37
DSP-201ENST00000379802 HMMRO75330 724 aa12.76□□□□□ -0.37
DSP-201ENST00000379802 SAFB2Q14151 953 aaKnown RBP eCLIP12.76□□□□□ -0.37
DSP-201ENST00000379802 SUPT16HQ9Y5B9 1047 aaKnown RBP12.76□□□□□ -0.37
DSP-201ENST00000379802 CWC22Q9HCG8 908 aaKnown RBP12.76□□□□□ -0.37
DSP-201ENST00000379802 FBXO3Q9UK99 471 aa12.75□□□□□ -0.37
DSP-201ENST00000379802 PES1O00541 588 aaKnown RBP12.75□□□□□ -0.37
DSP-201ENST00000379802 RTN4Q9NQC3 1192 aaKnown RBP12.75□□□□□ -0.37
DSP-201ENST00000379802 AMOTL1Q8IY63 956 aa12.75□□□□□ -0.37
DSP-201ENST00000379802 NOL10Q9BSC4 688 aaKnown RBP12.75□□□□□ -0.37
DSP-201ENST00000379802 DCAF8L1A6NGE4 600 aa12.75□□□□□ -0.37
DSP-201ENST00000379802 TRIM6-TRIM34B2RNG4 842 aa12.75□□□□□ -0.37
DSP-201ENST00000379802 TPD52L1Q16890 204 aaPredicted RBP12.75□□□□□ -0.37
DSP-201ENST00000379802 KTN1Q86UP2 1357 aaKnown RBP12.74□□□□□ -0.37
DSP-201ENST00000379802 TOMM22Q9NS69 142 aa12.74□□□□□ -0.37
DSP-201ENST00000379802 FHAD1B1AJZ9 1412 aa12.74□□□□□ -0.37
DSP-201ENST00000379802 ITPRIPQ8IWB1 547 aa12.74□□□□□ -0.37
DSP-201ENST00000379802 MIER1Q8N108 512 aa12.73□□□□□ -0.37
DSP-201ENST00000379802 TPM1P09493 284 aa12.73□□□□□ -0.37
DSP-201ENST00000379802 KIF16BQ96L93 1317 aa12.73□□□□□ -0.37
DSP-201ENST00000379802 ANO8Q9HCE9 1232 aaPredicted RBP12.73□□□□□ -0.37
DSP-201ENST00000379802 AKAP17AQ02040 695 aaKnown RBP12.72□□□□□ -0.37
DSP-201ENST00000379802 STK26Q9P289 416 aa12.71□□□□□ -0.38
DSP-201ENST00000379802 EID1Q9Y6B2 187 aa12.71□□□□□ -0.38
DSP-201ENST00000379802 CHMP4CQ96CF2 233 aa12.7□□□□□ -0.38
DSP-201ENST00000379802 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.7□□□□□ -0.38
DSP-201ENST00000379802 DCAF11Q8TEB1 546 aa12.7□□□□□ -0.38
DSP-201ENST00000379802 CCDC43Q96MW1 224 aaKnown RBP12.69□□□□□ -0.38
DSP-201ENST00000379802 LRRFIP1Q32MZ4 808 aaKnown RBP12.69□□□□□ -0.38
DSP-201ENST00000379802 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.69□□□□□ -0.38
DSP-201ENST00000379802 RWDD1Q9H446 243 aaPredicted RBP12.68□□□□□ -0.38
DSP-201ENST00000379802 CEP164Q9UPV0 1460 aa12.68□□□□□ -0.38
DSP-201ENST00000379802 MEX3CQ5U5Q3 659 aaKnown RBP12.68□□□□□ -0.38
DSP-201ENST00000379802 SF3A1Q15459 793 aaKnown RBP12.68□□□□□ -0.38
DSP-201ENST00000379802 CEP162Q5TB80 1403 aa12.68□□□□□ -0.38
DSP-201ENST00000379802 MSH5O43196 834 aa12.68□□□□□ -0.38
DSP-201ENST00000379802 WWC1Q8IX03 1113 aa12.67□□□□□ -0.38
DSP-201ENST00000379802 CALRP27797 417 aaKnown RBP12.67□□□□□ -0.38
DSP-201ENST00000379802 ROCK2O75116 1388 aaKnown RBP12.67□□□□□ -0.38
DSP-201ENST00000379802 RRP12Q5JTH9 1297 aaKnown RBP12.67□□□□□ -0.38
DSP-201ENST00000379802 LMOD3Q0VAK6 560 aa12.67□□□□□ -0.38
DSP-201ENST00000379802 ARID3AQ99856 593 aa12.66□□□□□ -0.38
DSP-201ENST00000379802 H3BQV1 296 aa12.66□□□□□ -0.38
DSP-201ENST00000379802 IFFO2Q5TF58 517 aa12.66□□□□□ -0.38
DSP-201ENST00000379802 U2AF1L5P0DN76 240 aaPredicted RBP12.65□□□□□ -0.38
DSP-201ENST00000379802 U2AF1Q01081 240 aaKnown RBP eCLIP12.65□□□□□ -0.384e-6■■■■□ 19.8
DSP-201ENST00000379802 ARHGAP35Q9NRY4 1499 aa12.65□□□□□ -0.38
DSP-201ENST00000379802 TERF2IPQ9NYB0 399 aa12.65□□□□□ -0.38
DSP-201ENST00000379802 RAD21O60216 631 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 8.1 ms