RNA–Protein interactions for RNA: ENST00000379516.6

SNX2-201, Transcript of sorting nexin 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX2, Length 2,128 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX2-201ENST00000379516 NEUROD1Q13562 356 aa21.91■■□□□ 1.1
SNX2-201ENST00000379516 DNMT1P26358 1616 aaKnown RBP21.9■■□□□ 1.1
SNX2-201ENST00000379516 GCC2Q8IWJ2 1684 aa21.9■■□□□ 1.1
SNX2-201ENST00000379516 ABCC10Q5T3U5 1492 aa21.89■■□□□ 1.1
SNX2-201ENST00000379516 ROCK1Q13464 1354 aa21.88■■□□□ 1.09
SNX2-201ENST00000379516 ABCC2Q92887 1545 aa21.87■■□□□ 1.09
SNX2-201ENST00000379516 TRIM52Q96A61 297 aa21.84■■□□□ 1.09
SNX2-201ENST00000379516 CDC42BPAQ5VT25 1732 aa21.83■■□□□ 1.08
SNX2-201ENST00000379516 KDM6BO15054 1643 aa21.82■■□□□ 1.08
SNX2-201ENST00000379516 TIMELESSQ9UNS1 1208 aa21.8■■□□□ 1.08
SNX2-201ENST00000379516 UHRF1BP1LA0JNW5 1464 aa21.76■■□□□ 1.07
SNX2-201ENST00000379516 ACIN1Q9UKV3 1341 aaKnown RBP21.75■■□□□ 1.07
SNX2-201ENST00000379516 NCOA1Q15788 1441 aa21.75■■□□□ 1.07
SNX2-201ENST00000379516 MPHOSPH9Q99550 1183 aa21.73■■□□□ 1.07
SNX2-201ENST00000379516 KCNH8Q96L42 1107 aa21.73■■□□□ 1.07
SNX2-201ENST00000379516 CROCC2H7BZ55 1655 aa21.72■■□□□ 1.07
SNX2-201ENST00000379516 ADGRL2O95490 1459 aa21.72■■□□□ 1.07
SNX2-201ENST00000379516 ANKRD30AQ9BXX3 1397 aa21.71■■□□□ 1.07
SNX2-201ENST00000379516 ZCCHC11Q5TAX3 1644 aaKnown RBP21.71■■□□□ 1.07
SNX2-201ENST00000379516 KDM5BQ9UGL1 1544 aa21.71■■□□□ 1.07
SNX2-201ENST00000379516 HNRNPMP52272 730 aaKnown RBP eCLIP21.71■■□□□ 1.07
SNX2-201ENST00000379516 OSCARQ8IYS5 282 aa21.71■■□□□ 1.07
SNX2-201ENST00000379516 ADGBQ8N7X0 1667 aa21.71■■□□□ 1.07
SNX2-201ENST00000379516 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.71■■□□□ 1.07
SNX2-201ENST00000379516 TONSLQ96HA7 1378 aa21.7■■□□□ 1.06
SNX2-201ENST00000379516 DENND4BO75064 1496 aaPredicted RBP21.7■■□□□ 1.06
SNX2-201ENST00000379516 PREX2Q70Z35 1606 aa21.7■■□□□ 1.06
SNX2-201ENST00000379516 TSPY4P0CV99 314 aa21.7■■□□□ 1.06
SNX2-201ENST00000379516 TSPY10P0CW01 314 aa21.7■■□□□ 1.06
SNX2-201ENST00000379516 TTC37Q6PGP7 1564 aa21.69■■□□□ 1.06
SNX2-201ENST00000379516 PPP1R15AO75807 674 aaPredicted RBP21.68■■□□□ 1.06
SNX2-201ENST00000379516 C9orf84Q5VXU9 1444 aa21.68■■□□□ 1.06
SNX2-201ENST00000379516 CDC42BPBQ9Y5S2 1711 aa21.68■■□□□ 1.06
SNX2-201ENST00000379516 SHANK2Q9UPX8 1470 aa21.67■■□□□ 1.06
SNX2-201ENST00000379516 SAMD9LQ8IVG5 1584 aa21.66■■□□□ 1.06
SNX2-201ENST00000379516 MBD5Q9P267 1494 aa21.65■■□□□ 1.06
SNX2-201ENST00000379516 ARHGAP5Q13017 1502 aa21.65■■□□□ 1.06
SNX2-201ENST00000379516 ARHGEF5Q12774 1597 aa21.64■■□□□ 1.06
SNX2-201ENST00000379516 FOXD1Q16676 465 aa21.64■■□□□ 1.05
SNX2-201ENST00000379516 SLC4A1APQ9BWU0 796 aaKnown RBP21.63■■□□□ 1.05
SNX2-201ENST00000379516 RSPH4AQ5TD94 716 aa21.62■■□□□ 1.05
SNX2-201ENST00000379516 ANKRD50Q9ULJ7 1429 aa21.61■■□□□ 1.05
SNX2-201ENST00000379516 CCDC141Q6ZP82 1450 aa21.61■■□□□ 1.05
SNX2-201ENST00000379516 MYO5CQ9NQX4 1742 aa21.59■■□□□ 1.05
SNX2-201ENST00000379516 PLCH2O75038 1416 aa21.58■■□□□ 1.04
SNX2-201ENST00000379516 SYCP2Q9BX26 1530 aa21.58■■□□□ 1.04
SNX2-201ENST00000379516 KIF15Q9NS87 1388 aa21.56■■□□□ 1.04
SNX2-201ENST00000379516 PZPP20742 1482 aa21.56■■□□□ 1.04
SNX2-201ENST00000379516 ANKRD30BQ9BXX2 1392 aa21.55■■□□□ 1.04
SNX2-201ENST00000379516 PLEKHH2Q8IVE3 1493 aa21.55■■□□□ 1.04
SNX2-201ENST00000379516 EFCAB2Q5VUJ9 269 aa21.54■■□□□ 1.04
SNX2-201ENST00000379516 MIER1Q8N108 512 aa21.54■■□□□ 1.04
SNX2-201ENST00000379516 KIAA1107Q9UPP5 1409 aa21.54■■□□□ 1.04
SNX2-201ENST00000379516 WDR7Q9Y4E6 1490 aa21.52■■□□□ 1.04
SNX2-201ENST00000379516 NUP155O75694 1391 aa21.49■■□□□ 1.03
SNX2-201ENST00000379516 ARHGEF12Q9NZN5 1544 aa21.48■■□□□ 1.03
SNX2-201ENST00000379516 PKD2Q13563 968 aa21.48■■□□□ 1.03
SNX2-201ENST00000379516 MAST1Q9Y2H9 1570 aa21.47■■□□□ 1.03
SNX2-201ENST00000379516 RPRD2Q5VT52 1461 aaKnown RBP21.47■■□□□ 1.03
SNX2-201ENST00000379516 L3MBTL2Q969R5 705 aa21.46■■□□□ 1.03
SNX2-201ENST00000379516 NPM1P06748 294 aaKnown RBP eCLIP21.46■■□□□ 1.03
SNX2-201ENST00000379516 ASXL2Q76L83 1435 aa21.45■■□□□ 1.02
SNX2-201ENST00000379516 HIRIP3Q9BW71 556 aaPredicted RBP21.43■■□□□ 1.02
SNX2-201ENST00000379516 ABCC1P33527 1531 aa21.43■■□□□ 1.02
SNX2-201ENST00000379516 ARAP3Q8WWN8 1544 aa21.43■■□□□ 1.02
SNX2-201ENST00000379516 KDM5DQ9BY66 1539 aa21.42■■□□□ 1.02
SNX2-201ENST00000379516 TRAPPC8Q9Y2L5 1435 aa21.4■■□□□ 1.02
SNX2-201ENST00000379516 PLXNC1O60486 1568 aa21.39■■□□□ 1.01
SNX2-201ENST00000379516 ABCA9Q8IUA7 1624 aa21.38■■□□□ 1.01
SNX2-201ENST00000379516 FANCAO15360 1455 aa21.36■■□□□ 1.01
SNX2-201ENST00000379516 TEX14Q8IWB6 1497 aa21.36■■□□□ 1.01
SNX2-201ENST00000379516 AFAP1Q8N556 730 aa21.35■■□□□ 1.01
SNX2-201ENST00000379516 DUOX2Q9NRD8 1548 aa21.34■■□□□ 1.01
SNX2-201ENST00000379516 SPAG9O60271 1321 aaKnown RBP21.34■■□□□ 1.01
SNX2-201ENST00000379516 DDX10Q13206 875 aaKnown RBP21.33■■□□□ 1.01
SNX2-201ENST00000379516 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.33■■□□□ 1.011e-7■■■□□ 16.8
SNX2-201ENST00000379516 FAM135AQ9P2D6 1515 aa21.33■■□□□ 1.01
SNX2-201ENST00000379516 ERBINQ96RT1 1412 aa21.31■■□□□ 1
SNX2-201ENST00000379516 NBPF8Q3BBV2 869 aa21.3■■□□□ 1
SNX2-201ENST00000379516 UNC13BO14795 1591 aa21.3■■□□□ 1
SNX2-201ENST00000379516 RTEL1-TNFRSF6BF6WH68 1400 aa21.29■■□□□ 1
SNX2-201ENST00000379516 YTHDC1Q96MU7 727 aaKnown RBP21.28■■□□□ 1
SNX2-201ENST00000379516 ADGRL1O94910 1474 aa21.28■■□□□ 1
SNX2-201ENST00000379516 SCAPERQ9BY12 1400 aa21.28■■□□□ 1
SNX2-201ENST00000379516 CENPBP07199 599 aaPredicted RBP21.27■■□□□ 1
SNX2-201ENST00000379516 HSPA5P11021 654 aaKnown RBP21.27■■□□□ 1
SNX2-201ENST00000379516 EIF4G2P78344 907 aaKnown RBP eCLIP21.26■□□□□ 0.992e-6■■■■■ 26.9
SNX2-201ENST00000379516 ZFYVE16Q7Z3T8 1539 aa21.25■□□□□ 0.99
SNX2-201ENST00000379516 MYT1LQ9UL68 1186 aa21.24■□□□□ 0.99
SNX2-201ENST00000379516 CD109Q6YHK3 1445 aa21.23■□□□□ 0.99
SNX2-201ENST00000379516 IQGAP3Q86VI3 1631 aa21.22■□□□□ 0.99
SNX2-201ENST00000379516 CYB5RLQ6IPT4 315 aa21.21■□□□□ 0.99
SNX2-201ENST00000379516 MAGI2Q86UL8 1455 aa21.21■□□□□ 0.99
SNX2-201ENST00000379516 ATP7AQ04656 1500 aa21.2■□□□□ 0.99
SNX2-201ENST00000379516 ZNF326Q5BKZ1 582 aaKnown RBP21.2■□□□□ 0.98
SNX2-201ENST00000379516 INO80Q9ULG1 1556 aaPredicted RBP21.18■□□□□ 0.98
SNX2-201ENST00000379516 CCDC144AA2RUR9 1427 aa21.17■□□□□ 0.98
SNX2-201ENST00000379516 PLA2R1Q13018 1463 aa21.15■□□□□ 0.98
SNX2-201ENST00000379516 ZNF518AQ6AHZ1 1483 aa21.13■□□□□ 0.97
SNX2-201ENST00000379516 CFAP74Q9C0B2 1584 aa21.13■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms