RNA–Protein interactions for RNA: ENST00000378726.1

SSU72-204, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

TSL 2

Gene SSU72, Length 2,238 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-204ENST00000378726 DAPK1P53355 1430 aa28.37■■■□□ 2.13
SSU72-204ENST00000378726 ABCC5O15440 1437 aa28.37■■■□□ 2.13
SSU72-204ENST00000378726 UHRF1BP1LA0JNW5 1464 aa28.34■■■□□ 2.13
SSU72-204ENST00000378726 MAPKBP1O60336 1514 aa28.34■■■□□ 2.13
SSU72-204ENST00000378726 CAMSAP2Q08AD1 1489 aa28.34■■■□□ 2.13
SSU72-204ENST00000378726 AKNAQ7Z591 1439 aa28.32■■■□□ 2.12
SSU72-204ENST00000378726 DNMT1P26358 1616 aaKnown RBP28.31■■■□□ 2.12
SSU72-204ENST00000378726 ROCK1Q13464 1354 aa28.28■■■□□ 2.12
SSU72-204ENST00000378726 CDC42BPAQ5VT25 1732 aa28.28■■■□□ 2.12
SSU72-204ENST00000378726 KCNH8Q96L42 1107 aa28.27■■■□□ 2.12
SSU72-204ENST00000378726 KDM5BQ9UGL1 1544 aa28.26■■■□□ 2.11
SSU72-204ENST00000378726 SIN3AQ96ST3 1273 aa28.22■■■□□ 2.11
SSU72-204ENST00000378726 ZCCHC11Q5TAX3 1644 aaKnown RBP28.22■■■□□ 2.11
SSU72-204ENST00000378726 GCC2Q8IWJ2 1684 aa28.22■■■□□ 2.11
SSU72-204ENST00000378726 TRIM52Q96A61 297 aa28.2■■■□□ 2.1
SSU72-204ENST00000378726 ZNF316A6NFI3 1004 aaPredicted RBP28.19■■■□□ 2.1
SSU72-204ENST00000378726 CENPBP07199 599 aaPredicted RBP28.18■■■□□ 2.1
SSU72-204ENST00000378726 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP28.18■■■□□ 2.11e-6■□□□□ 9.6
SSU72-204ENST00000378726 HNRNPMP52272 730 aaKnown RBP eCLIP28.17■■■□□ 2.13e-7■■□□□ 13.8
SSU72-204ENST00000378726 KDM6BO15054 1643 aa28.16■■■□□ 2.1
SSU72-204ENST00000378726 NCOA1Q15788 1441 aa28.15■■■□□ 2.1
SSU72-204ENST00000378726 TSPY4P0CV99 314 aa28.14■■■□□ 2.09
SSU72-204ENST00000378726 TSPY10P0CW01 314 aa28.14■■■□□ 2.09
SSU72-204ENST00000378726 TTC37Q6PGP7 1564 aa28.13■■■□□ 2.09
SSU72-204ENST00000378726 CDC42BPBQ9Y5S2 1711 aa28.12■■■□□ 2.09
SSU72-204ENST00000378726 GTF3C3Q9Y5Q9 886 aa28.12■■■□□ 2.09
SSU72-204ENST00000378726 PREX2Q70Z35 1606 aa28.12■■■□□ 2.09
SSU72-204ENST00000378726 ANKRD30AQ9BXX3 1397 aa28.1■■■□□ 2.09
SSU72-204ENST00000378726 ADGRL2O95490 1459 aa28.09■■■□□ 2.09
SSU72-204ENST00000378726 RSPH4AQ5TD94 716 aa28.08■■■□□ 2.09
SSU72-204ENST00000378726 MPHOSPH9Q99550 1183 aa28.08■■■□□ 2.09
SSU72-204ENST00000378726 TIMELESSQ9UNS1 1208 aa28.08■■■□□ 2.09
SSU72-204ENST00000378726 MBD5Q9P267 1494 aa28.08■■■□□ 2.08
SSU72-204ENST00000378726 ARHGAP5Q13017 1502 aa28.07■■■□□ 2.08
SSU72-204ENST00000378726 SAMD9LQ8IVG5 1584 aa28.06■■■□□ 2.08
SSU72-204ENST00000378726 CROCC2H7BZ55 1655 aa28.06■■■□□ 2.08
SSU72-204ENST00000378726 C9orf84Q5VXU9 1444 aa28.05■■■□□ 2.08
SSU72-204ENST00000378726 PLCH2O75038 1416 aa28.04■■■□□ 2.08
SSU72-204ENST00000378726 ADGBQ8N7X0 1667 aa28.04■■■□□ 2.08
SSU72-204ENST00000378726 SHANK2Q9UPX8 1470 aa28.04■■■□□ 2.08
SSU72-204ENST00000378726 ARHGEF5Q12774 1597 aa28.03■■■□□ 2.08
SSU72-204ENST00000378726 NPM1P06748 294 aaKnown RBP eCLIP28.02■■■□□ 2.08
SSU72-204ENST00000378726 EFCAB2Q5VUJ9 269 aa28.02■■■□□ 2.08
SSU72-204ENST00000378726 MYO5CQ9NQX4 1742 aa28.01■■■□□ 2.08
SSU72-204ENST00000378726 WDR7Q9Y4E6 1490 aa28■■■□□ 2.07
SSU72-204ENST00000378726 CCDC141Q6ZP82 1450 aa27.99■■■□□ 2.07
SSU72-204ENST00000378726 DENND4BO75064 1496 aaPredicted RBP27.99■■■□□ 2.07
SSU72-204ENST00000378726 ANKRD50Q9ULJ7 1429 aa27.96■■■□□ 2.07
SSU72-204ENST00000378726 KIAA1107Q9UPP5 1409 aa27.96■■■□□ 2.07
SSU72-204ENST00000378726 PLEKHH2Q8IVE3 1493 aa27.96■■■□□ 2.07
SSU72-204ENST00000378726 SLC4A1APQ9BWU0 796 aaKnown RBP27.95■■■□□ 2.06
SSU72-204ENST00000378726 SYCP2Q9BX26 1530 aa27.95■■■□□ 2.06
SSU72-204ENST00000378726 ASXL2Q76L83 1435 aa27.94■■■□□ 2.06
SSU72-204ENST00000378726 PPP1R15AO75807 674 aaPredicted RBP27.92■■■□□ 2.06
SSU72-204ENST00000378726 FOXD1Q16676 465 aa27.92■■■□□ 2.06
SSU72-204ENST00000378726 TONSLQ96HA7 1378 aa27.92■■■□□ 2.06
SSU72-204ENST00000378726 KIF15Q9NS87 1388 aa27.91■■■□□ 2.06
SSU72-204ENST00000378726 ARHGEF12Q9NZN5 1544 aa27.88■■■□□ 2.05
SSU72-204ENST00000378726 MIER1Q8N108 512 aa27.86■■■□□ 2.05
SSU72-204ENST00000378726 YTHDC1Q96MU7 727 aaKnown RBP27.84■■■□□ 2.05
SSU72-204ENST00000378726 PZPP20742 1482 aa27.84■■■□□ 2.05
SSU72-204ENST00000378726 ARAP3Q8WWN8 1544 aa27.84■■■□□ 2.05
SSU72-204ENST00000378726 ANKRD30BQ9BXX2 1392 aa27.82■■■□□ 2.04
SSU72-204ENST00000378726 MAST1Q9Y2H9 1570 aa27.81■■■□□ 2.04
SSU72-204ENST00000378726 ABCA9Q8IUA7 1624 aa27.81■■■□□ 2.04
SSU72-204ENST00000378726 NUP155O75694 1391 aa27.81■■■□□ 2.04
SSU72-204ENST00000378726 ABCC1P33527 1531 aa27.79■■■□□ 2.04
SSU72-204ENST00000378726 CYB5RLQ6IPT4 315 aa27.79■■■□□ 2.04
SSU72-204ENST00000378726 TRAPPC8Q9Y2L5 1435 aa27.78■■■□□ 2.04
SSU72-204ENST00000378726 MYT1Q01538 1121 aa27.77■■■□□ 2.04
SSU72-204ENST00000378726 PKD2Q13563 968 aa27.77■■■□□ 2.04
SSU72-204ENST00000378726 FANCAO15360 1455 aa27.76■■■□□ 2.04
SSU72-204ENST00000378726 AFAP1Q8N556 730 aa27.76■■■□□ 2.03
SSU72-204ENST00000378726 SPAG9O60271 1321 aaKnown RBP27.71■■■□□ 2.03
SSU72-204ENST00000378726 PLXNC1O60486 1568 aa27.68■■■□□ 2.02
SSU72-204ENST00000378726 RPRD2Q5VT52 1461 aaKnown RBP27.68■■■□□ 2.02
SSU72-204ENST00000378726 L3MBTL2Q969R5 705 aa27.68■■■□□ 2.02
SSU72-204ENST00000378726 KDM5DQ9BY66 1539 aa27.67■■■□□ 2.02
SSU72-204ENST00000378726 CD109Q6YHK3 1445 aa27.66■■■□□ 2.02
SSU72-204ENST00000378726 SCAPERQ9BY12 1400 aa27.66■■■□□ 2.02
SSU72-204ENST00000378726 RTEL1-TNFRSF6BF6WH68 1400 aa27.65■■■□□ 2.02
SSU72-204ENST00000378726 ADGRL1O94910 1474 aa27.65■■■□□ 2.02
SSU72-204ENST00000378726 DUOX2Q9NRD8 1548 aa27.65■■■□□ 2.02
SSU72-204ENST00000378726 GRWD1Q9BQ67 446 aaKnown RBP eCLIP27.64■■■□□ 2.011e-7■■□□□ 12.1
SSU72-204ENST00000378726 RIMBP3CA6NJZ7 1639 aa27.63■■■□□ 2.01
SSU72-204ENST00000378726 RIMBP3BA6NNM3 1639 aa27.63■■■□□ 2.01
SSU72-204ENST00000378726 RIMBP3Q9UFD9 1639 aa27.63■■■□□ 2.01
SSU72-204ENST00000378726 ERBINQ96RT1 1412 aa27.59■■■□□ 2.01
SSU72-204ENST00000378726 MYT1LQ9UL68 1186 aa27.59■■■□□ 2.01
SSU72-204ENST00000378726 FAM135AQ9P2D6 1515 aa27.57■■■□□ 2
SSU72-204ENST00000378726 ZFYVE16Q7Z3T8 1539 aa27.55■■■□□ 2
SSU72-204ENST00000378726 HIRIP3Q9BW71 556 aaPredicted RBP27.54■■■□□ 2
SSU72-204ENST00000378726 UNC13BO14795 1591 aa27.54■■■□□ 2
SSU72-204ENST00000378726 TEX14Q8IWB6 1497 aa27.51■■□□□ 1.99
SSU72-204ENST00000378726 ATP7AQ04656 1500 aa27.5■■□□□ 1.99
SSU72-204ENST00000378726 INO80Q9ULG1 1556 aaPredicted RBP27.47■■□□□ 1.99
SSU72-204ENST00000378726 NBPF8Q3BBV2 869 aa27.47■■□□□ 1.99
SSU72-204ENST00000378726 ZNF518AQ6AHZ1 1483 aa27.46■■□□□ 1.99
SSU72-204ENST00000378726 CFAP74Q9C0B2 1584 aa27.46■■□□□ 1.99
SSU72-204ENST00000378726 MAGI2Q86UL8 1455 aa27.45■■□□□ 1.99
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms