RNA–Protein interactions for RNA: ENST00000376492.3

CLCN6-205, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 1 (best)

Gene CLCN6, Length 1,062 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-205ENST00000376492 PLCH2O75038 1416 aa21.93■■□□□ 1.1
CLCN6-205ENST00000376492 EHMT2Q96KQ7 1210 aa21.9■■□□□ 1.1
CLCN6-205ENST00000376492 FER1L4A9Z1Z3 1794 aa21.88■■□□□ 1.09
CLCN6-205ENST00000376492 ATP1B4Q9UN42 357 aaPredicted RBP21.87■■□□□ 1.09
CLCN6-205ENST00000376492 ARHGEF12Q9NZN5 1544 aa21.85■■□□□ 1.09
CLCN6-205ENST00000376492 ATP10AO60312 1499 aa21.85■■□□□ 1.09
CLCN6-205ENST00000376492 C9orf84Q5VXU9 1444 aa21.85■■□□□ 1.09
CLCN6-205ENST00000376492 KIF14Q15058 1648 aa21.84■■□□□ 1.09
CLCN6-205ENST00000376492 FMN1Q68DA7 1419 aa21.83■■□□□ 1.09
CLCN6-205ENST00000376492 ARHGAP35Q9NRY4 1499 aa21.83■■□□□ 1.08
CLCN6-205ENST00000376492 EFCAB2Q5VUJ9 269 aa21.82■■□□□ 1.08
CLCN6-205ENST00000376492 MYO5CQ9NQX4 1742 aa21.81■■□□□ 1.08
CLCN6-205ENST00000376492 UBTFP17480 764 aaKnown RBP21.81■■□□□ 1.08
CLCN6-205ENST00000376492 CEBPAP49715 358 aaPredicted RBP21.8■■□□□ 1.08
CLCN6-205ENST00000376492 CERKQ8TCT0 537 aa21.8■■□□□ 1.08
CLCN6-205ENST00000376492 ZNF518AQ6AHZ1 1483 aa21.77■■□□□ 1.08
CLCN6-205ENST00000376492 ARHGAP5Q13017 1502 aa21.77■■□□□ 1.08
CLCN6-205ENST00000376492 TROQ12816 1431 aaPredicted RBP21.77■■□□□ 1.08
CLCN6-205ENST00000376492 AFAP1Q8N556 730 aa21.76■■□□□ 1.07
CLCN6-205ENST00000376492 CDK11AQ9UQ88 783 aaPredicted RBP21.76■■□□□ 1.07
CLCN6-205ENST00000376492 KDM5CP41229 1560 aa21.75■■□□□ 1.07
CLCN6-205ENST00000376492 PREX1Q8TCU6 1659 aa21.75■■□□□ 1.07
CLCN6-205ENST00000376492 DIP2CQ9Y2E4 1556 aa21.72■■□□□ 1.07
CLCN6-205ENST00000376492 CLIP1P30622 1438 aa21.72■■□□□ 1.07
CLCN6-205ENST00000376492 LRRIQ1Q96JM4 1722 aa21.7■■□□□ 1.06
CLCN6-205ENST00000376492 MYT1LQ9UL68 1186 aa21.7■■□□□ 1.06
CLCN6-205ENST00000376492 UHRF1BP1Q6BDS2 1440 aa21.68■■□□□ 1.06
CLCN6-205ENST00000376492 ABCA6Q8N139 1617 aa21.68■■□□□ 1.06
CLCN6-205ENST00000376492 STRCQ7RTU9 1775 aa21.66■■□□□ 1.06
CLCN6-205ENST00000376492 REREQ9P2R6 1566 aa21.65■■□□□ 1.06
CLCN6-205ENST00000376492 TRAPPC8Q9Y2L5 1435 aa21.65■■□□□ 1.06
CLCN6-205ENST00000376492 ABCC1P33527 1531 aa21.65■■□□□ 1.06
CLCN6-205ENST00000376492 MLH3Q9UHC1 1453 aa21.64■■□□□ 1.06
CLCN6-205ENST00000376492 CDC42BPBQ9Y5S2 1711 aa21.64■■□□□ 1.06
CLCN6-205ENST00000376492 PREX2Q70Z35 1606 aa21.62■■□□□ 1.05
CLCN6-205ENST00000376492 CHIC1Q5VXU3 224 aa21.61■■□□□ 1.05
CLCN6-205ENST00000376492 C3P01024 1663 aa21.6■■□□□ 1.05
CLCN6-205ENST00000376492 DMRT2Q9Y5R5 561 aa21.6■■□□□ 1.05
CLCN6-205ENST00000376492 AGLP35573 1532 aa21.6■■□□□ 1.05
CLCN6-205ENST00000376492 CASKIN1Q8WXD9 1431 aa21.58■■□□□ 1.05
CLCN6-205ENST00000376492 ITSN2Q9NZM3 1697 aa21.58■■□□□ 1.05
CLCN6-205ENST00000376492 CCDC18Q5T9S5 1454 aa21.58■■□□□ 1.04
CLCN6-205ENST00000376492 ESF1Q9H501 851 aaKnown RBP21.55■■□□□ 1.04
CLCN6-205ENST00000376492 PTPRTO14522 1441 aa21.55■■□□□ 1.04
CLCN6-205ENST00000376492 KIDINS220Q9ULH0 1771 aa21.54■■□□□ 1.04
CLCN6-205ENST00000376492 DISP3Q9P2K9 1392 aa21.52■■□□□ 1.04
CLCN6-205ENST00000376492 SETD1BQ9UPS6 1966 aaKnown RBP21.51■■□□□ 1.03
CLCN6-205ENST00000376492 CDC42BPAQ5VT25 1732 aa21.51■■□□□ 1.03
CLCN6-205ENST00000376492 SAMD9LQ8IVG5 1584 aa21.5■■□□□ 1.03
CLCN6-205ENST00000376492 CNTLNQ9NXG0 1405 aa21.5■■□□□ 1.03
CLCN6-205ENST00000376492 ILDR2Q71H61 639 aa21.5■■□□□ 1.03
CLCN6-205ENST00000376492 NCOA1Q15788 1441 aa21.49■■□□□ 1.03
CLCN6-205ENST00000376492 LTBP4Q8N2S1 1624 aa21.49■■□□□ 1.03
CLCN6-205ENST00000376492 ZNF777Q9ULD5 760 aaPredicted RBP21.49■■□□□ 1.03
CLCN6-205ENST00000376492 SYCP2Q9BX26 1530 aa21.49■■□□□ 1.03
CLCN6-205ENST00000376492 FYCO1Q9BQS8 1478 aa21.47■■□□□ 1.03
CLCN6-205ENST00000376492 GPATCH8Q9UKJ3 1502 aaKnown RBP21.45■■□□□ 1.02
CLCN6-205ENST00000376492 HNRNPMP52272 730 aaKnown RBP eCLIP21.44■■□□□ 1.02
CLCN6-205ENST00000376492 NPATQ14207 1427 aa21.44■■□□□ 1.02
CLCN6-205ENST00000376492 SPAG9O60271 1321 aaKnown RBP21.43■■□□□ 1.02
CLCN6-205ENST00000376492 CAMSAP1Q5T5Y3 1602 aa21.43■■□□□ 1.02
CLCN6-205ENST00000376492 ZMYM3Q14202 1370 aa21.42■■□□□ 1.02
CLCN6-205ENST00000376492 MROH2AA6NES4 1674 aa21.4■■□□□ 1.02
CLCN6-205ENST00000376492 ATP7AQ04656 1500 aa21.4■■□□□ 1.02
CLCN6-205ENST00000376492 SPATA31D1Q6ZQQ2 1576 aa21.4■■□□□ 1.02
CLCN6-205ENST00000376492 SUPT6HQ7KZ85 1726 aaKnown RBP21.39■■□□□ 1.01
CLCN6-205ENST00000376492 PLXNC1O60486 1568 aa21.39■■□□□ 1.01
CLCN6-205ENST00000376492 NCKAP5LQ9HCH0 1330 aa21.38■■□□□ 1.01
CLCN6-205ENST00000376492 INO80Q9ULG1 1556 aaPredicted RBP21.38■■□□□ 1.01
CLCN6-205ENST00000376492 IQSEC2Q5JU85 1478 aa21.38■■□□□ 1.01
CLCN6-205ENST00000376492 KIAA1107Q9UPP5 1409 aa21.37■■□□□ 1.01
CLCN6-205ENST00000376492 SOCS7O14512 581 aa21.36■■□□□ 1.01
CLCN6-205ENST00000376492 CFDP1Q9UEE9 299 aaPredicted RBP21.36■■□□□ 1.01
CLCN6-205ENST00000376492 A2MP01023 1474 aa21.36■■□□□ 1.01
CLCN6-205ENST00000376492 CLTCQ00610 1675 aaKnown RBP21.36■■□□□ 1.01
CLCN6-205ENST00000376492 ZNF335Q9H4Z2 1342 aaPredicted RBP21.35■■□□□ 1.01
CLCN6-205ENST00000376492 MYO3AQ8NEV4 1616 aa21.35■■□□□ 1.01
CLCN6-205ENST00000376492 PLEKHH2Q8IVE3 1493 aa21.34■■□□□ 1.01
CLCN6-205ENST00000376492 CCNB3Q8WWL7 1395 aa21.34■■□□□ 1.01
CLCN6-205ENST00000376492 PTPRKQ15262 1439 aa21.33■■□□□ 1.01
CLCN6-205ENST00000376492 CEP170BQ9Y4F5 1589 aaPredicted RBP21.31■■□□□ 1
CLCN6-205ENST00000376492 ZNF142P52746 1687 aaPredicted RBP21.31■■□□□ 1
CLCN6-205ENST00000376492 GGT6Q6P531 493 aa21.31■■□□□ 1
CLCN6-205ENST00000376492 PLA2R1Q13018 1463 aa21.3■■□□□ 1
CLCN6-205ENST00000376492 ZNF644Q9H582 1327 aaPredicted RBP21.29■■□□□ 1
CLCN6-205ENST00000376492 TCOF1Q13428 1488 aaKnown RBP21.29■■□□□ 1
CLCN6-205ENST00000376492 MTUS2Q5JR59 1369 aa21.29■■□□□ 1
CLCN6-205ENST00000376492 PKD2Q13563 968 aa21.26■□□□□ 0.99
CLCN6-205ENST00000376492 TIAM1Q13009 1591 aa21.26■□□□□ 0.99
CLCN6-205ENST00000376492 UBAP1LF5GYI3 381 aa21.25■□□□□ 0.99
CLCN6-205ENST00000376492 MBD5Q9P267 1494 aa21.25■□□□□ 0.99
CLCN6-205ENST00000376492 ADGBQ8N7X0 1667 aa21.23■□□□□ 0.99
CLCN6-205ENST00000376492 PPP6R1Q9UPN7 881 aa21.21■□□□□ 0.99
CLCN6-205ENST00000376492 A2ML1A8K2U0 1454 aa21.2■□□□□ 0.98
CLCN6-205ENST00000376492 EHBP1L1Q8N3D4 1523 aa21.19■□□□□ 0.98
CLCN6-205ENST00000376492 DNMT1P26358 1616 aaKnown RBP21.18■□□□□ 0.98
CLCN6-205ENST00000376492 DHX29Q7Z478 1369 aaKnown RBP21.17■□□□□ 0.98
CLCN6-205ENST00000376492 RTEL1-TNFRSF6BF6WH68 1400 aa21.17■□□□□ 0.98
CLCN6-205ENST00000376492 CEP162Q5TB80 1403 aa21.16■□□□□ 0.98
CLCN6-205ENST00000376492 FBXO31Q5XUX0 539 aaPredicted RBP21.16■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms