RNA–Protein interactions for RNA: ENST00000376007.8

PRRC2A-201, Transcript of proline rich coiled-coil 2A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRRC2A, Length 6,861 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRRC2A-201ENST00000376007 ZCCHC6Q5VYS8 1495 aaKnown RBP23.52■■□□□ 1.36
PRRC2A-201ENST00000376007 CHMP3Q9Y3E7 222 aa23.52■■□□□ 1.36
PRRC2A-201ENST00000376007 TMF1P82094 1093 aa23.51■■□□□ 1.35
PRRC2A-201ENST00000376007 KIF27Q86VH2 1401 aa23.51■■□□□ 1.35
PRRC2A-201ENST00000376007 HDAC5Q9UQL6 1122 aa23.5■■□□□ 1.35
PRRC2A-201ENST00000376007 VPS53Q5VIR6 699 aa23.49■■□□□ 1.35
PRRC2A-201ENST00000376007 DDRGK1Q96HY6 314 aa23.49■■□□□ 1.35
PRRC2A-201ENST00000376007 MORC1Q86VD1 984 aa23.48■■□□□ 1.35
PRRC2A-201ENST00000376007 CALD1Q05682 793 aaKnown RBP23.47■■□□□ 1.35
PRRC2A-201ENST00000376007 EFCAB2Q5VUJ9 269 aa23.46■■□□□ 1.35
PRRC2A-201ENST00000376007 SPAG9O60271 1321 aaKnown RBP23.46■■□□□ 1.35
PRRC2A-201ENST00000376007 WASHC2AQ641Q2 1341 aa23.45■■□□□ 1.35
PRRC2A-201ENST00000376007 TCEAL9Q9UHQ7 104 aa23.44■■□□□ 1.34
PRRC2A-201ENST00000376007 NOL10Q9BSC4 688 aaKnown RBP23.43■■□□□ 1.34
PRRC2A-201ENST00000376007 FRAT1Q92837 279 aaPredicted RBP23.42■■□□□ 1.34
PRRC2A-201ENST00000376007 CFAP44Q96MT7 982 aa23.42■■□□□ 1.34
PRRC2A-201ENST00000376007 MARCH6O60337 910 aa23.41■■□□□ 1.34
PRRC2A-201ENST00000376007 PDS5BQ9NTI5 1447 aa23.4■■□□□ 1.34
PRRC2A-201ENST00000376007 GTF3C3Q9Y5Q9 886 aa23.4■■□□□ 1.34
PRRC2A-201ENST00000376007 KIAA1211Q6ZU35 1233 aa23.38■■□□□ 1.33
PRRC2A-201ENST00000376007 GPATCH3Q96I76 525 aa23.37■■□□□ 1.33
PRRC2A-201ENST00000376007 AMOTL1Q8IY63 956 aa23.37■■□□□ 1.33
PRRC2A-201ENST00000376007 AMPHP49418 695 aa23.36■■□□□ 1.33
PRRC2A-201ENST00000376007 GLIPR1L2Q4G1C9 344 aa23.36■■□□□ 1.33
PRRC2A-201ENST00000376007 STK31Q9BXU1 1019 aa23.35■■□□□ 1.33
PRRC2A-201ENST00000376007 CYB5RLQ6IPT4 315 aa23.35■■□□□ 1.33
PRRC2A-201ENST00000376007 PLCB2Q00722 1185 aa23.34■■□□□ 1.33
PRRC2A-201ENST00000376007 CC2D1BQ5T0F9 858 aaKnown RBP23.34■■□□□ 1.33
PRRC2A-201ENST00000376007 CCDC34Q96HJ3 373 aa23.34■■□□□ 1.33
PRRC2A-201ENST00000376007 DNTTIP2Q5QJE6 756 aaKnown RBP23.33■■□□□ 1.33
PRRC2A-201ENST00000376007 WASHC2CQ9Y4E1 1318 aa23.31■■□□□ 1.32
PRRC2A-201ENST00000376007 OSCARQ8IYS5 282 aa23.31■■□□□ 1.32
PRRC2A-201ENST00000376007 RASSF8Q8NHQ8 419 aa23.31■■□□□ 1.32
PRRC2A-201ENST00000376007 FBXW7Q969H0 707 aa23.3■■□□□ 1.32
PRRC2A-201ENST00000376007 CEP89Q96ST8 783 aa23.3■■□□□ 1.32
PRRC2A-201ENST00000376007 NOC3LQ8WTT2 800 aaKnown RBP23.3■■□□□ 1.32
PRRC2A-201ENST00000376007 HSP90AB1P08238 724 aaKnown RBP23.29■■□□□ 1.32
PRRC2A-201ENST00000376007 DCAF11Q8TEB1 546 aa23.29■■□□□ 1.32
PRRC2A-201ENST00000376007 WRNQ14191 1432 aaPredicted RBP eCLIP23.27■■□□□ 1.32
PRRC2A-201ENST00000376007 ANO8Q9HCE9 1232 aaPredicted RBP23.26■■□□□ 1.31
PRRC2A-201ENST00000376007 TERF2IPQ9NYB0 399 aa23.26■■□□□ 1.31
PRRC2A-201ENST00000376007 C1orf141Q5JVX7 400 aa23.26■■□□□ 1.31
PRRC2A-201ENST00000376007 ATF3P18847 181 aa23.25■■□□□ 1.31
PRRC2A-201ENST00000376007 IPO8O15397 1037 aaKnown RBP23.24■■□□□ 1.31
PRRC2A-201ENST00000376007 TOMM22Q9NS69 142 aa23.24■■□□□ 1.31
PRRC2A-201ENST00000376007 LTV1Q96GA3 475 aaPredicted RBP23.24■■□□□ 1.31
PRRC2A-201ENST00000376007 HTATSF1O43719 755 aaKnown RBP23.24■■□□□ 1.31
PRRC2A-201ENST00000376007 SYTL4Q96C24 671 aaPredicted RBP23.23■■□□□ 1.31
PRRC2A-201ENST00000376007 EIF3AQ14152 1382 aaKnown RBP23.23■■□□□ 1.31
PRRC2A-201ENST00000376007 KIF3BO15066 747 aa23.21■■□□□ 1.31
PRRC2A-201ENST00000376007 NACADO15069 1562 aa23.21■■□□□ 1.31
PRRC2A-201ENST00000376007 GOLGA3Q08378 1498 aa23.21■■□□□ 1.31
PRRC2A-201ENST00000376007 PPP1R1BQ9UD71 204 aaPredicted RBP23.21■■□□□ 1.31
PRRC2A-201ENST00000376007 EEA1Q15075 1411 aa23.2■■□□□ 1.31
PRRC2A-201ENST00000376007 CCAR1Q8IX12 1150 aaKnown RBP23.2■■□□□ 1.31
PRRC2A-201ENST00000376007 RAD21O60216 631 aa23.2■■□□□ 1.3
PRRC2A-201ENST00000376007 HIRIP3Q9BW71 556 aaPredicted RBP23.18■■□□□ 1.3
PRRC2A-201ENST00000376007 TTC5Q8N0Z6 440 aa23.18■■□□□ 1.3
PRRC2A-201ENST00000376007 RBM33Q96EV2 1170 aaKnown RBP23.15■■□□□ 1.3
PRRC2A-201ENST00000376007 FHAD1B1AJZ9 1412 aa23.15■■□□□ 1.3
PRRC2A-201ENST00000376007 HSP90B1P14625 803 aaKnown RBP23.14■■□□□ 1.3
PRRC2A-201ENST00000376007 PDE4CQ08493 712 aa23.14■■□□□ 1.29
PRRC2A-201ENST00000376007 LMOD3Q0VAK6 560 aa23.13■■□□□ 1.29
PRRC2A-201ENST00000376007 VPS37DQ86XT2 251 aa23.12■■□□□ 1.29
PRRC2A-201ENST00000376007 CECR2Q9BXF3 1484 aa23.11■■□□□ 1.29
PRRC2A-201ENST00000376007 NBR1Q14596 966 aa23.11■■□□□ 1.29
PRRC2A-201ENST00000376007 TPM4P67936 248 aa23.11■■□□□ 1.29
PRRC2A-201ENST00000376007 DRC7Q8IY82 874 aa23.1■■□□□ 1.29
PRRC2A-201ENST00000376007 NUTM2FA1L443 756 aa23.1■■□□□ 1.29
PRRC2A-201ENST00000376007 APBB1O00213 710 aa23.1■■□□□ 1.29
PRRC2A-201ENST00000376007 PSME1Q06323 249 aa23.09■■□□□ 1.29
PRRC2A-201ENST00000376007 CEP164Q9UPV0 1460 aa23.08■■□□□ 1.29
PRRC2A-201ENST00000376007 U2AF1L5P0DN76 240 aaPredicted RBP23.08■■□□□ 1.28
PRRC2A-201ENST00000376007 U2AF1Q01081 240 aaKnown RBP eCLIP23.08■■□□□ 1.283e-8■□□□□ 9.1
PRRC2A-201ENST00000376007 HMGB2P26583 209 aaKnown RBP23.07■■□□□ 1.28
PRRC2A-201ENST00000376007 HMMRO75330 724 aa23.05■■□□□ 1.28
PRRC2A-201ENST00000376007 HSCBQ8IWL3 235 aa23.05■■□□□ 1.28
PRRC2A-201ENST00000376007 CCDC43Q96MW1 224 aaKnown RBP23.05■■□□□ 1.28
PRRC2A-201ENST00000376007 CCDC180Q9P1Z9 1646 aa23.05■■□□□ 1.28
PRRC2A-201ENST00000376007 AKAP17AQ02040 695 aaKnown RBP23.04■■□□□ 1.28
PRRC2A-201ENST00000376007 FAM69CQ0P6D2 419 aa23.04■■□□□ 1.28
PRRC2A-201ENST00000376007 CARMIL1Q5VZK9 1371 aa23.03■■□□□ 1.28
PRRC2A-201ENST00000376007 CUX2O14529 1486 aa23.03■■□□□ 1.28
PRRC2A-201ENST00000376007 A0A0U1RQG5 324 aaPredicted RBP23.03■■□□□ 1.28
PRRC2A-201ENST00000376007 LRRFIP1Q32MZ4 808 aaKnown RBP23.03■■□□□ 1.28
PRRC2A-201ENST00000376007 IRX6P78412 446 aaPredicted RBP23.02■■□□□ 1.28
PRRC2A-201ENST00000376007 NUTM2DQ5VT03 806 aaPredicted RBP23.02■■□□□ 1.28
PRRC2A-201ENST00000376007 WWC2Q6AWC2 1192 aa23.02■■□□□ 1.28
PRRC2A-201ENST00000376007 RGS3P49796 1198 aa23.01■■□□□ 1.27
PRRC2A-201ENST00000376007 SMC4Q9NTJ3 1288 aa23.01■■□□□ 1.27
PRRC2A-201ENST00000376007 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.99■■□□□ 1.273e-9■□□□□ 8.7
PRRC2A-201ENST00000376007 RSPH4AQ5TD94 716 aa22.98■■□□□ 1.27
PRRC2A-201ENST00000376007 R3HCC1Q9Y3T6 440 aaKnown RBP22.98■■□□□ 1.27
PRRC2A-201ENST00000376007 DHX16O60231 1041 aaKnown RBP22.98■■□□□ 1.27
PRRC2A-201ENST00000376007 WWC1Q8IX03 1113 aa22.97■■□□□ 1.27
PRRC2A-201ENST00000376007 TEFQ10587 303 aa22.97■■□□□ 1.27
PRRC2A-201ENST00000376007 ANKRD30AQ9BXX3 1397 aa22.97■■□□□ 1.27
PRRC2A-201ENST00000376007 SYNE3Q6ZMZ3 975 aa22.97■■□□□ 1.27
PRRC2A-201ENST00000376007 NEXNQ0ZGT2 675 aa22.96■■□□□ 1.27
PRRC2A-201ENST00000376007 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22.96■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms