RNA–Protein interactions for RNA: ENST00000372920.1

HNF4A-203, Transcript of hepatocyte nuclear factor 4 alpha, humanhuman

TSL 1 (best)

Gene HNF4A, Length 3,340 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNF4A-203ENST00000372920 MRS2Q9HD23 443 aa24.86■■□□□ 1.57
HNF4A-203ENST00000372920 NBPF8Q3BBV2 869 aa24.83■■□□□ 1.57
HNF4A-203ENST00000372920 CDK13Q14004 1512 aaKnown RBP24.83■■□□□ 1.57
HNF4A-203ENST00000372920 ZBED9Q6R2W3 1325 aa24.83■■□□□ 1.56
HNF4A-203ENST00000372920 ANKRD30BQ9BXX2 1392 aa24.82■■□□□ 1.56
HNF4A-203ENST00000372920 RPRD2Q5VT52 1461 aaKnown RBP24.8■■□□□ 1.56
HNF4A-203ENST00000372920 ARID3CA6NKF2 412 aa24.79■■□□□ 1.56
HNF4A-203ENST00000372920 TEX14Q8IWB6 1497 aa24.78■■□□□ 1.56
HNF4A-203ENST00000372920 ERICH6Q7L0X2 663 aa24.77■■□□□ 1.56
HNF4A-203ENST00000372920 KIF7Q2M1P5 1343 aa24.77■■□□□ 1.56
HNF4A-203ENST00000372920 PDS5BQ9NTI5 1447 aa24.77■■□□□ 1.56
HNF4A-203ENST00000372920 B4GALNT3Q6L9W6 998 aa24.76■■□□□ 1.55
HNF4A-203ENST00000372920 IQGAP2Q13576 1575 aa24.76■■□□□ 1.55
HNF4A-203ENST00000372920 SPATA31E1Q6ZUB1 1445 aa24.76■■□□□ 1.55
HNF4A-203ENST00000372920 ROCK1Q13464 1354 aa24.75■■□□□ 1.55
HNF4A-203ENST00000372920 DAPK1P53355 1430 aa24.75■■□□□ 1.55
HNF4A-203ENST00000372920 WDR62O43379 1518 aa24.75■■□□□ 1.55
HNF4A-203ENST00000372920 TARBP1Q13395 1621 aaKnown RBP24.75■■□□□ 1.55
HNF4A-203ENST00000372920 ABCC5O15440 1437 aa24.7■■□□□ 1.55
HNF4A-203ENST00000372920 SLC4A1APQ9BWU0 796 aaKnown RBP24.7■■□□□ 1.54
HNF4A-203ENST00000372920 ZNF644Q9H582 1327 aaPredicted RBP24.67■■□□□ 1.54
HNF4A-203ENST00000372920 DNMT1P26358 1616 aaKnown RBP24.66■■□□□ 1.54
HNF4A-203ENST00000372920 PBRM1Q86U86 1689 aa24.66■■□□□ 1.54
HNF4A-203ENST00000372920 POLR1AO95602 1720 aaPredicted RBP24.64■■□□□ 1.54
HNF4A-203ENST00000372920 ADAMTS12P58397 1594 aa24.63■■□□□ 1.53
HNF4A-203ENST00000372920 SMG6Q86US8 1419 aaKnown RBP24.6■■□□□ 1.53
HNF4A-203ENST00000372920 DHX29Q7Z478 1369 aaKnown RBP24.6■■□□□ 1.53
HNF4A-203ENST00000372920 PZPP20742 1482 aa24.57■■□□□ 1.52
HNF4A-203ENST00000372920 DNAJC5BQ9UF47 199 aa24.57■■□□□ 1.52
HNF4A-203ENST00000372920 CNGB1Q14028 1251 aaPredicted RBP24.56■■□□□ 1.52
HNF4A-203ENST00000372920 NUP153P49790 1475 aaKnown RBP24.54■■□□□ 1.52
HNF4A-203ENST00000372920 MBD5Q9P267 1494 aa24.54■■□□□ 1.52
HNF4A-203ENST00000372920 NUDCQ9Y266 331 aa24.53■■□□□ 1.52
HNF4A-203ENST00000372920 USP47Q96K76 1375 aa24.53■■□□□ 1.52
HNF4A-203ENST00000372920 POLR3GLQ9BT43 218 aa24.53■■□□□ 1.52
HNF4A-203ENST00000372920 RNF123Q5XPI4 1314 aa24.5■■□□□ 1.51
HNF4A-203ENST00000372920 BCORL1Q5H9F3 1711 aa24.5■■□□□ 1.51
HNF4A-203ENST00000372920 ZNF326Q5BKZ1 582 aaKnown RBP24.5■■□□□ 1.51
HNF4A-203ENST00000372920 DISP1Q96F81 1524 aa24.5■■□□□ 1.51
HNF4A-203ENST00000372920 KIAA0556O60303 1618 aa24.49■■□□□ 1.51
HNF4A-203ENST00000372920 KIAA1107Q9UPP5 1409 aa24.48■■□□□ 1.51
HNF4A-203ENST00000372920 MYT1LQ9UL68 1186 aa24.47■■□□□ 1.51
HNF4A-203ENST00000372920 CAMSAP2Q08AD1 1489 aa24.46■■□□□ 1.51
HNF4A-203ENST00000372920 NOP58Q9Y2X3 529 aaKnown RBP24.45■■□□□ 1.51
HNF4A-203ENST00000372920 RAPGEF6Q8TEU7 1601 aa24.45■■□□□ 1.5
HNF4A-203ENST00000372920 CCDC136Q96JN2 1154 aa24.45■■□□□ 1.5
HNF4A-203ENST00000372920 KIAA0586Q9BVV6 1533 aa24.45■■□□□ 1.5
HNF4A-203ENST00000372920 CFDP1Q9UEE9 299 aaPredicted RBP24.45■■□□□ 1.5
HNF4A-203ENST00000372920 ARID4BQ4LE39 1312 aaPredicted RBP24.44■■□□□ 1.5
HNF4A-203ENST00000372920 PRG4Q92954 1404 aaPredicted RBP24.44■■□□□ 1.5
HNF4A-203ENST00000372920 PKD2Q13563 968 aa24.43■■□□□ 1.5
HNF4A-203ENST00000372920 KIF14Q15058 1648 aa24.43■■□□□ 1.5
HNF4A-203ENST00000372920 PNISRQ8TF01 805 aaKnown RBP24.43■■□□□ 1.5
HNF4A-203ENST00000372920 KDM5CP41229 1560 aa24.42■■□□□ 1.5
HNF4A-203ENST00000372920 SENP3-EIF4A1A0A087X0R7 540 aa24.41■■□□□ 1.5
HNF4A-203ENST00000372920 TROQ12816 1431 aaPredicted RBP24.41■■□□□ 1.5
HNF4A-203ENST00000372920 PAK3O75914 559 aaPredicted RBP24.39■■□□□ 1.5
HNF4A-203ENST00000372920 ADGBQ8N7X0 1667 aa24.39■■□□□ 1.49
HNF4A-203ENST00000372920 ADGRL2O95490 1459 aa24.39■■□□□ 1.49
HNF4A-203ENST00000372920 ZNF777Q9ULD5 760 aaPredicted RBP24.38■■□□□ 1.49
HNF4A-203ENST00000372920 TMC1Q8TDI8 760 aa24.38■■□□□ 1.49
HNF4A-203ENST00000372920 GPATCH8Q9UKJ3 1502 aaKnown RBP24.38■■□□□ 1.49
HNF4A-203ENST00000372920 ZNF608Q9ULD9 1512 aaPredicted RBP24.37■■□□□ 1.49
HNF4A-203ENST00000372920 ROCK2O75116 1388 aaKnown RBP24.37■■□□□ 1.49
HNF4A-203ENST00000372920 DEKP35659 375 aaKnown RBP24.37■■□□□ 1.49
HNF4A-203ENST00000372920 MRC2Q9UBG0 1479 aa24.36■■□□□ 1.49
HNF4A-203ENST00000372920 UHRF1BP1Q6BDS2 1440 aa24.35■■□□□ 1.49
HNF4A-203ENST00000372920 ANKRD30AQ9BXX3 1397 aa24.35■■□□□ 1.49
HNF4A-203ENST00000372920 ITSN2Q9NZM3 1697 aa24.34■■□□□ 1.49
HNF4A-203ENST00000372920 RALGAPBQ86X10 1494 aa24.34■■□□□ 1.49
HNF4A-203ENST00000372920 CARD11Q9BXL7 1154 aa24.33■■□□□ 1.48
HNF4A-203ENST00000372920 ANKRD50Q9ULJ7 1429 aa24.32■■□□□ 1.48
HNF4A-203ENST00000372920 KIF15Q9NS87 1388 aa24.31■■□□□ 1.48
HNF4A-203ENST00000372920 CROCC2H7BZ55 1655 aa24.31■■□□□ 1.48
HNF4A-203ENST00000372920 NBR1Q14596 966 aa24.31■■□□□ 1.48
HNF4A-203ENST00000372920 ANP32AP39687 249 aaKnown RBP24.3■■□□□ 1.48
HNF4A-203ENST00000372920 LRPPRCP42704 1394 aaKnown RBP24.3■■□□□ 1.48
HNF4A-203ENST00000372920 IFT140Q96RY7 1462 aa24.29■■□□□ 1.48
HNF4A-203ENST00000372920 IPO9Q96P70 1041 aaKnown RBP24.29■■□□□ 1.48
HNF4A-203ENST00000372920 GRIN2AQ12879 1464 aa24.29■■□□□ 1.48
HNF4A-203ENST00000372920 PLB1Q6P1J6 1458 aa24.29■■□□□ 1.48
HNF4A-203ENST00000372920 NUP155O75694 1391 aa24.27■■□□□ 1.48
HNF4A-203ENST00000372920 ST20-MTHFSA0A0A6YYL1 179 aa24.26■■□□□ 1.47
HNF4A-203ENST00000372920 BRD4O60885 1362 aaPredicted RBP24.26■■□□□ 1.47
HNF4A-203ENST00000372920 MYBBP1AQ9BQG0 1328 aaKnown RBP24.25■■□□□ 1.47
HNF4A-203ENST00000372920 ADCY10Q96PN6 1610 aa24.25■■□□□ 1.47
HNF4A-203ENST00000372920 ARHGEF12Q9NZN5 1544 aa24.25■■□□□ 1.47
HNF4A-203ENST00000372920 KDM2AQ9Y2K7 1162 aa24.23■■□□□ 1.47
HNF4A-203ENST00000372920 RALBP1Q15311 655 aa24.23■■□□□ 1.47
HNF4A-203ENST00000372920 KTN1Q86UP2 1357 aaKnown RBP24.22■■□□□ 1.47
HNF4A-203ENST00000372920 RRP1P56182 461 aaKnown RBP24.21■■□□□ 1.47
HNF4A-203ENST00000372920 ZBTB47Q9UFB7 747 aaPredicted RBP24.2■■□□□ 1.46
HNF4A-203ENST00000372920 C9orf84Q5VXU9 1444 aa24.19■■□□□ 1.46
HNF4A-203ENST00000372920 DCAF11Q8TEB1 546 aa24.18■■□□□ 1.46
HNF4A-203ENST00000372920 EXOC6Q8TAG9 804 aa24.17■■□□□ 1.46
HNF4A-203ENST00000372920 SHANK2Q9UPX8 1470 aa24.16■■□□□ 1.46
HNF4A-203ENST00000372920 KDM5DQ9BY66 1539 aa24.15■■□□□ 1.46
HNF4A-203ENST00000372920 RCAN3Q9UKA8 241 aa24.15■■□□□ 1.46
HNF4A-203ENST00000372920 E9PCH4 1651 aa24.14■■□□□ 1.46
HNF4A-203ENST00000372920 CEP170Q5SW79 1584 aa24.14■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms