RNA–Protein interactions for RNA: ENST00000369367.7

SCAF11-202, Transcript of SR-related CTD associated factor 11, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SCAF11, Length 7,543 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-202ENST00000369367 STK26Q9P289 416 aa12.78□□□□□ -0.36
SCAF11-202ENST00000369367 TERF2IPQ9NYB0 399 aa12.78□□□□□ -0.36
SCAF11-202ENST00000369367 GOLGA2Q08379 1002 aa12.78□□□□□ -0.36
SCAF11-202ENST00000369367 LAS1LQ9Y4W2 734 aaKnown RBP12.78□□□□□ -0.36
SCAF11-202ENST00000369367 PAK3O75914 559 aaPredicted RBP12.77□□□□□ -0.36
SCAF11-202ENST00000369367 HIRIP3Q9BW71 556 aaPredicted RBP12.77□□□□□ -0.36
SCAF11-202ENST00000369367 HNRNPMP52272 730 aaKnown RBP eCLIP12.76□□□□□ -0.37
SCAF11-202ENST00000369367 FHOD3Q2V2M9 1422 aa12.76□□□□□ -0.37
SCAF11-202ENST00000369367 TMX4Q9H1E5 349 aaPredicted RBP12.76□□□□□ -0.37
SCAF11-202ENST00000369367 SAFB2Q14151 953 aaKnown RBP eCLIP12.74□□□□□ -0.37
SCAF11-202ENST00000369367 FAM69CQ0P6D2 419 aa12.74□□□□□ -0.37
SCAF11-202ENST00000369367 FGD5Q6ZNL6 1462 aa12.74□□□□□ -0.37
SCAF11-202ENST00000369367 TNNT2P45379 298 aaPredicted RBP12.73□□□□□ -0.37
SCAF11-202ENST00000369367 MPHOSPH9Q99550 1183 aa12.73□□□□□ -0.37
SCAF11-202ENST00000369367 NEUROD2Q15784 382 aa12.73□□□□□ -0.37
SCAF11-202ENST00000369367 VGFO15240 615 aaPredicted RBP12.73□□□□□ -0.37
SCAF11-202ENST00000369367 ROCK2O75116 1388 aaKnown RBP12.73□□□□□ -0.37
SCAF11-202ENST00000369367 OS9Q13438 667 aaPredicted RBP12.72□□□□□ -0.37
SCAF11-202ENST00000369367 HDAC5Q9UQL6 1122 aa12.72□□□□□ -0.37
SCAF11-202ENST00000369367 NGDNQ8NEJ9 315 aaKnown RBP12.72□□□□□ -0.37
SCAF11-202ENST00000369367 SIN3AQ96ST3 1273 aa12.72□□□□□ -0.37
SCAF11-202ENST00000369367 CCDC9Q9Y3X0 531 aaKnown RBP12.72□□□□□ -0.37
SCAF11-202ENST00000369367 BECN1Q14457 450 aa12.72□□□□□ -0.37
SCAF11-202ENST00000369367 GRIN2BQ13224 1484 aa12.72□□□□□ -0.37
SCAF11-202ENST00000369367 NCLP19338 710 aaKnown RBP12.71□□□□□ -0.37
SCAF11-202ENST00000369367 SOX12O15370 315 aa12.71□□□□□ -0.38
SCAF11-202ENST00000369367 CC2D1BQ5T0F9 858 aaKnown RBP12.71□□□□□ -0.38
SCAF11-202ENST00000369367 MRC2Q9UBG0 1479 aa12.7□□□□□ -0.38
SCAF11-202ENST00000369367 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.7□□□□□ -0.38
SCAF11-202ENST00000369367 CFAP44Q96MT7 982 aa12.7□□□□□ -0.38
SCAF11-202ENST00000369367 KTN1Q86UP2 1357 aaKnown RBP12.69□□□□□ -0.38
SCAF11-202ENST00000369367 IFT140Q96RY7 1462 aa12.68□□□□□ -0.38
SCAF11-202ENST00000369367 STAC3Q96MF2 364 aa12.67□□□□□ -0.38
SCAF11-202ENST00000369367 IPO8O15397 1037 aaKnown RBP12.66□□□□□ -0.38
SCAF11-202ENST00000369367 GOLGA6L22H0YM25 854 aa12.66□□□□□ -0.38
SCAF11-202ENST00000369367 KANK4Q5T7N3 995 aaPredicted RBP12.66□□□□□ -0.38
SCAF11-202ENST00000369367 ANP32EQ9BTT0 268 aa12.66□□□□□ -0.38
SCAF11-202ENST00000369367 CCDC144AA2RUR9 1427 aa12.66□□□□□ -0.38
SCAF11-202ENST00000369367 DDRGK1Q96HY6 314 aa12.65□□□□□ -0.38
SCAF11-202ENST00000369367 LMOD3Q0VAK6 560 aa12.64□□□□□ -0.39
SCAF11-202ENST00000369367 ZRSR1Q15695 479 aaKnown RBP12.64□□□□□ -0.39
SCAF11-202ENST00000369367 RALBP1Q15311 655 aa12.64□□□□□ -0.39
SCAF11-202ENST00000369367 HMGXB3Q12766 1538 aa12.63□□□□□ -0.39
SCAF11-202ENST00000369367 AMPHP49418 695 aa12.62□□□□□ -0.39
SCAF11-202ENST00000369367 CC2D2AQ9P2K1 1620 aa12.62□□□□□ -0.39
SCAF11-202ENST00000369367 MYOM3Q5VTT5 1437 aa12.62□□□□□ -0.39
SCAF11-202ENST00000369367 IGF1RP08069 1367 aa12.61□□□□□ -0.39
SCAF11-202ENST00000369367 RAB3GAP2Q9H2M9 1393 aa12.61□□□□□ -0.39
SCAF11-202ENST00000369367 FRAT1Q92837 279 aaPredicted RBP12.61□□□□□ -0.39
SCAF11-202ENST00000369367 FGD1P98174 961 aa12.61□□□□□ -0.39
SCAF11-202ENST00000369367 MIER1Q8N108 512 aa12.61□□□□□ -0.39
SCAF11-202ENST00000369367 SYNJ2O15056 1496 aa12.6□□□□□ -0.39
SCAF11-202ENST00000369367 CFTRP13569 1480 aa12.6□□□□□ -0.39
SCAF11-202ENST00000369367 RAD54L2Q9Y4B4 1467 aa12.6□□□□□ -0.39
SCAF11-202ENST00000369367 U2AF1L5P0DN76 240 aaPredicted RBP12.6□□□□□ -0.39
SCAF11-202ENST00000369367 KCNJ4P48050 445 aa12.6□□□□□ -0.39
SCAF11-202ENST00000369367 U2AF1Q01081 240 aaKnown RBP eCLIP12.6□□□□□ -0.39
SCAF11-202ENST00000369367 STK31Q9BXU1 1019 aa12.6□□□□□ -0.39
SCAF11-202ENST00000369367 AQRO60306 1485 aaKnown RBP eCLIP12.59□□□□□ -0.398e-11■□□□□ 11.3
SCAF11-202ENST00000369367 CUX1P39880 1505 aa12.59□□□□□ -0.39
SCAF11-202ENST00000369367 EVC2Q86UK5 1308 aa12.59□□□□□ -0.39
SCAF11-202ENST00000369367 HSPA5P11021 654 aaKnown RBP12.58□□□□□ -0.4
SCAF11-202ENST00000369367 EVA1CP58658 441 aa12.57□□□□□ -0.4
SCAF11-202ENST00000369367 CCER2I3L3R5 266 aa12.56□□□□□ -0.4
SCAF11-202ENST00000369367 FOXD1Q16676 465 aa12.56□□□□□ -0.4
SCAF11-202ENST00000369367 MCCP23508 829 aa12.55□□□□□ -0.4
SCAF11-202ENST00000369367 ATF3P18847 181 aa12.55□□□□□ -0.4
SCAF11-202ENST00000369367 POGZQ7Z3K3 1410 aa12.55□□□□□ -0.4
SCAF11-202ENST00000369367 PRDM2Q13029 1718 aa12.55□□□□□ -0.4
SCAF11-202ENST00000369367 MEX3CQ5U5Q3 659 aaKnown RBP12.55□□□□□ -0.4
SCAF11-202ENST00000369367 PRG4Q92954 1404 aaPredicted RBP12.54□□□□□ -0.4
SCAF11-202ENST00000369367 PLEKHH2Q8IVE3 1493 aa12.54□□□□□ -0.4
SCAF11-202ENST00000369367 PHLDB1Q86UU1 1377 aa12.54□□□□□ -0.4
SCAF11-202ENST00000369367 COG3Q96JB2 828 aa12.53□□□□□ -0.4
SCAF11-202ENST00000369367 ZNF330Q9Y3S2 320 aaPredicted RBP12.53□□□□□ -0.4
SCAF11-202ENST00000369367 TRAK1Q9UPV9 953 aa12.53□□□□□ -0.4
SCAF11-202ENST00000369367 G3V3G9 751 aa12.52□□□□□ -0.4
SCAF11-202ENST00000369367 DCAF8Q5TAQ9 597 aa12.52□□□□□ -0.4
SCAF11-202ENST00000369367 GTF2E1P29083 439 aaPredicted RBP12.52□□□□□ -0.41
SCAF11-202ENST00000369367 TAF7LQ5H9L4 462 aa12.51□□□□□ -0.41
SCAF11-202ENST00000369367 CGNL1Q0VF96 1302 aa12.51□□□□□ -0.41
SCAF11-202ENST00000369367 C1orf141Q5JVX7 400 aa12.51□□□□□ -0.41
SCAF11-202ENST00000369367 L3MBTL2Q969R5 705 aa12.5□□□□□ -0.41
SCAF11-202ENST00000369367 PSME1Q06323 249 aa12.5□□□□□ -0.41
SCAF11-202ENST00000369367 NUTM2DQ5VT03 806 aaPredicted RBP12.5□□□□□ -0.41
SCAF11-202ENST00000369367 GPATCH3Q96I76 525 aa12.5□□□□□ -0.41
SCAF11-202ENST00000369367 DHX57Q6P158 1386 aaKnown RBP12.5□□□□□ -0.41
SCAF11-202ENST00000369367 HMMRO75330 724 aa12.49□□□□□ -0.41
SCAF11-202ENST00000369367 KIF15Q9NS87 1388 aa12.49□□□□□ -0.41
SCAF11-202ENST00000369367 LAMC3Q9Y6N6 1575 aa12.49□□□□□ -0.41
SCAF11-202ENST00000369367 ARHGAP5Q13017 1502 aa12.49□□□□□ -0.41
SCAF11-202ENST00000369367 GORABQ5T7V8 394 aa12.48□□□□□ -0.41
SCAF11-202ENST00000369367 THEMISQ8N1K5 641 aaPredicted RBP12.48□□□□□ -0.41
SCAF11-202ENST00000369367 KIAA1211Q6ZU35 1233 aa12.48□□□□□ -0.41
SCAF11-202ENST00000369367 TOPBP1Q92547 1522 aa12.48□□□□□ -0.41
SCAF11-202ENST00000369367 NLRP13Q86W25 1043 aa12.48□□□□□ -0.41
SCAF11-202ENST00000369367 IRX6P78412 446 aaPredicted RBP12.47□□□□□ -0.41
SCAF11-202ENST00000369367 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.47□□□□□ -0.416e-6■■□□□ 14.4
SCAF11-202ENST00000369367 PPP4R2Q9NY27 417 aa12.47□□□□□ -0.41
SCAF11-202ENST00000369367 FYCO1Q9BQS8 1478 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms