RNA–Protein interactions for RNA: ENST00000369096.8

PRDM1-203, Transcript of PR/SET domain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRDM1, Length 5,164 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM1-203ENST00000369096 PRM3Q9NNZ6 103 aa19.97■□□□□ 0.79
PRDM1-203ENST00000369096 CFDP1Q9UEE9 299 aaPredicted RBP19.97■□□□□ 0.79
PRDM1-203ENST00000369096 WRNQ14191 1432 aaPredicted RBP eCLIP19.97■□□□□ 0.79
PRDM1-203ENST00000369096 KIAA1211Q6ZU35 1233 aa19.97■□□□□ 0.79
PRDM1-203ENST00000369096 CEP162Q5TB80 1403 aa19.96■□□□□ 0.79
PRDM1-203ENST00000369096 BAZ1BQ9UIG0 1483 aaKnown RBP19.95■□□□□ 0.78
PRDM1-203ENST00000369096 SMARCA2P51531 1590 aa19.95■□□□□ 0.78
PRDM1-203ENST00000369096 GBP4Q96PP9 640 aa19.95■□□□□ 0.78
PRDM1-203ENST00000369096 CFAP44Q96MT7 982 aa19.94■□□□□ 0.78
PRDM1-203ENST00000369096 PDE4CQ08493 712 aa19.94■□□□□ 0.78
PRDM1-203ENST00000369096 SOGA1O94964 1423 aa19.93■□□□□ 0.78
PRDM1-203ENST00000369096 TNIKQ9UKE5 1360 aa19.92■□□□□ 0.78
PRDM1-203ENST00000369096 SLKQ9H2G2 1235 aaPredicted RBP19.91■□□□□ 0.78
PRDM1-203ENST00000369096 A0A0U1RQG5 324 aaPredicted RBP19.91■□□□□ 0.78
PRDM1-203ENST00000369096 GOLGA3Q08378 1498 aa19.9■□□□□ 0.78
PRDM1-203ENST00000369096 SIN3AQ96ST3 1273 aa19.89■□□□□ 0.77
PRDM1-203ENST00000369096 HTATSF1O43719 755 aaKnown RBP19.88■□□□□ 0.77
PRDM1-203ENST00000369096 RTF1Q92541 710 aaKnown RBP19.87■□□□□ 0.77
PRDM1-203ENST00000369096 TMF1P82094 1093 aa19.86■□□□□ 0.77
PRDM1-203ENST00000369096 GOLGA6L1Q8N7Z2 621 aa19.86■□□□□ 0.77
PRDM1-203ENST00000369096 SYAP1Q96A49 352 aaPredicted RBP19.85■□□□□ 0.77
PRDM1-203ENST00000369096 RBM19Q9Y4C8 960 aaKnown RBP19.85■□□□□ 0.77
PRDM1-203ENST00000369096 MORC1Q86VD1 984 aa19.85■□□□□ 0.77
PRDM1-203ENST00000369096 ZBTB4Q9P1Z0 1013 aaPredicted RBP19.85■□□□□ 0.77
PRDM1-203ENST00000369096 PTMSP20962 102 aa19.84■□□□□ 0.77
PRDM1-203ENST00000369096 SRPK2P78362 688 aaKnown RBP19.84■□□□□ 0.77
PRDM1-203ENST00000369096 TPM4P67936 248 aa19.84■□□□□ 0.77
PRDM1-203ENST00000369096 ZNF330Q9Y3S2 320 aaPredicted RBP19.83■□□□□ 0.77
PRDM1-203ENST00000369096 IPO8O15397 1037 aaKnown RBP19.83■□□□□ 0.76
PRDM1-203ENST00000369096 CCDC34Q96HJ3 373 aa19.81■□□□□ 0.76
PRDM1-203ENST00000369096 SAFB2Q14151 953 aaKnown RBP eCLIP19.8■□□□□ 0.76
PRDM1-203ENST00000369096 HSP90B1P14625 803 aaKnown RBP19.8■□□□□ 0.76
PRDM1-203ENST00000369096 DCAF11Q8TEB1 546 aa19.79■□□□□ 0.76
PRDM1-203ENST00000369096 RASSF8Q8NHQ8 419 aa19.78■□□□□ 0.76
PRDM1-203ENST00000369096 CREBRFQ8IUR6 639 aa19.78■□□□□ 0.76
PRDM1-203ENST00000369096 UNC13AQ9UPW8 1703 aa19.77■□□□□ 0.76
PRDM1-203ENST00000369096 CEP164Q9UPV0 1460 aa19.77■□□□□ 0.76
PRDM1-203ENST00000369096 GOLGA6L3A6NEY3 463 aa19.77■□□□□ 0.76
PRDM1-203ENST00000369096 ITPRIPQ8IWB1 547 aa19.76■□□□□ 0.75
PRDM1-203ENST00000369096 RWDD1Q9H446 243 aaPredicted RBP19.76■□□□□ 0.75
PRDM1-203ENST00000369096 GORABQ5T7V8 394 aa19.76■□□□□ 0.75
PRDM1-203ENST00000369096 CEP89Q96ST8 783 aa19.75■□□□□ 0.75
PRDM1-203ENST00000369096 ATAD2BQ9ULI0 1458 aa19.75■□□□□ 0.75
PRDM1-203ENST00000369096 CALD1Q05682 793 aaKnown RBP19.74■□□□□ 0.75
PRDM1-203ENST00000369096 TPM3P06753 285 aa19.73■□□□□ 0.75
PRDM1-203ENST00000369096 MFAP1P55081 439 aaKnown RBP19.73■□□□□ 0.75
PRDM1-203ENST00000369096 U2AF1L5P0DN76 240 aaPredicted RBP19.7■□□□□ 0.74
PRDM1-203ENST00000369096 U2AF1Q01081 240 aaKnown RBP eCLIP19.7■□□□□ 0.74
PRDM1-203ENST00000369096 NOL8Q76FK4 1167 aaKnown RBP19.7■□□□□ 0.74
PRDM1-203ENST00000369096 TRIM6-TRIM34B2RNG4 842 aa19.69■□□□□ 0.74
PRDM1-203ENST00000369096 CHMP3Q9Y3E7 222 aa19.69■□□□□ 0.74
PRDM1-203ENST00000369096 HDGFP51858 240 aaKnown RBP19.68■□□□□ 0.74
PRDM1-203ENST00000369096 MLECQ14165 292 aa19.68■□□□□ 0.74
PRDM1-203ENST00000369096 USP35Q9P2H5 1018 aa19.68■□□□□ 0.74
PRDM1-203ENST00000369096 RCAN3Q9UKA8 241 aa19.68■□□□□ 0.74
PRDM1-203ENST00000369096 RUSC2Q8N2Y8 1516 aa19.68■□□□□ 0.74
PRDM1-203ENST00000369096 TCERG1O14776 1098 aaKnown RBP19.68■□□□□ 0.74
PRDM1-203ENST00000369096 CSB-PGBD3P0DP91 1061 aa19.67■□□□□ 0.74
PRDM1-203ENST00000369096 BICRAQ9NZM4 1560 aa19.67■□□□□ 0.74
PRDM1-203ENST00000369096 FOXD4L1Q9NU39 408 aa19.67■□□□□ 0.74
PRDM1-203ENST00000369096 TMX4Q9H1E5 349 aaPredicted RBP19.67■□□□□ 0.74
PRDM1-203ENST00000369096 TAF7LQ5H9L4 462 aa19.66■□□□□ 0.74
PRDM1-203ENST00000369096 CSPP1Q1MSJ5 1256 aa19.66■□□□□ 0.74
PRDM1-203ENST00000369096 EIF4G1Q04637 1599 aaKnown RBP19.65■□□□□ 0.74
PRDM1-203ENST00000369096 ANO8Q9HCE9 1232 aaPredicted RBP19.65■□□□□ 0.74
PRDM1-203ENST00000369096 STK31Q9BXU1 1019 aa19.65■□□□□ 0.74
PRDM1-203ENST00000369096 STK26Q9P289 416 aa19.65■□□□□ 0.74
PRDM1-203ENST00000369096 HDGFL2Q7Z4V5 671 aaPredicted RBP19.65■□□□□ 0.74
PRDM1-203ENST00000369096 PAK3O75914 559 aaPredicted RBP19.64■□□□□ 0.74
PRDM1-203ENST00000369096 TOMM22Q9NS69 142 aa19.64■□□□□ 0.73
PRDM1-203ENST00000369096 CCER2I3L3R5 266 aa19.64■□□□□ 0.73
PRDM1-203ENST00000369096 GPATCH3Q96I76 525 aa19.64■□□□□ 0.73
PRDM1-203ENST00000369096 PES1O00541 588 aaKnown RBP19.63■□□□□ 0.73
PRDM1-203ENST00000369096 SF3A1Q15459 793 aaKnown RBP19.63■□□□□ 0.73
PRDM1-203ENST00000369096 MARCH6O60337 910 aa19.62■□□□□ 0.73
PRDM1-203ENST00000369096 HMMRO75330 724 aa19.61■□□□□ 0.73
PRDM1-203ENST00000369096 KTN1Q86UP2 1357 aaKnown RBP19.61■□□□□ 0.73
PRDM1-203ENST00000369096 PMFBP1Q8TBY8 1022 aa19.6■□□□□ 0.73
PRDM1-203ENST00000369096 WWC1Q8IX03 1113 aa19.6■□□□□ 0.73
PRDM1-203ENST00000369096 CCAR2Q8N163 923 aaKnown RBP19.6■□□□□ 0.73
PRDM1-203ENST00000369096 VPS53Q5VIR6 699 aa19.6■□□□□ 0.73
PRDM1-203ENST00000369096 CHMP4AQ9BY43 222 aa19.6■□□□□ 0.73
PRDM1-203ENST00000369096 SETQ01105 290 aaPredicted RBP19.59■□□□□ 0.73
PRDM1-203ENST00000369096 FOXD4L5Q5VV16 416 aaPredicted RBP19.59■□□□□ 0.73
PRDM1-203ENST00000369096 FOXD4L4Q8WXT5 416 aaPredicted RBP19.59■□□□□ 0.73
PRDM1-203ENST00000369096 CLUAP1Q96AJ1 413 aa19.59■□□□□ 0.73
PRDM1-203ENST00000369096 SMC4Q9NTJ3 1288 aa19.59■□□□□ 0.73
PRDM1-203ENST00000369096 HSP90AA2PQ14568 343 aaPredicted RBP19.58■□□□□ 0.73
PRDM1-203ENST00000369096 HDAC5Q9UQL6 1122 aa19.58■□□□□ 0.73
PRDM1-203ENST00000369096 SLC4A10Q6U841 1118 aa19.58■□□□□ 0.72
PRDM1-203ENST00000369096 PHF14O94880 888 aa19.58■□□□□ 0.72
PRDM1-203ENST00000369096 KANK1Q14678 1352 aa19.57■□□□□ 0.72
PRDM1-203ENST00000369096 KIF16BQ96L93 1317 aa19.57■□□□□ 0.72
PRDM1-203ENST00000369096 PATL2C9JE40 543 aaKnown RBP19.57■□□□□ 0.72
PRDM1-203ENST00000369096 HSPA5P11021 654 aaKnown RBP19.56■□□□□ 0.72
PRDM1-203ENST00000369096 KIF3AQ9Y496 699 aa19.56■□□□□ 0.72
PRDM1-203ENST00000369096 IPO9Q96P70 1041 aaKnown RBP19.56■□□□□ 0.72
PRDM1-203ENST00000369096 G3V3G9 751 aa19.56■□□□□ 0.72
PRDM1-203ENST00000369096 DCAF8Q5TAQ9 597 aa19.56■□□□□ 0.72
PRDM1-203ENST00000369096 SPAG9O60271 1321 aaKnown RBP19.56■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms